© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3751 |
| Gene name | |
| Location | Contig_20:43673..44594 |
| Strand | - |
| Gene length (bp) | 921 |
| Transcript length (bp) | 921 |
| Coding sequence length (bp) | 921 |
| Protein length (aa) | 307 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.6442 | 0.6671 | 0.3094 | 0.0431 | 0.3709 | 0.0296 | 0.0665 | 0.1901 | 0.1161 | 0.0568 |
| Orthofinder run ID | 4 |
| Orthogroup | 6924 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10282 |
| Ophiocordyceps subramaniannii | Hirsu2|3751 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|6938 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3751 MRIILPLQQPPKECLSIGPSQGLVYGLDRDIVLKLPFQYEVTSDLDMAHCWDLSLGCFVAMEKELAVYDALRGQP HANFARRLAPDQSEYLFLERLRPLRSVWPDAGHRDRRRWVLEFLAAIGWLEKLGFVNGDLAVRNLGVDQANRLKL FDFGSATPRSHPDYSNDVRRDHFHLATCLHFLLSGIDPFDNINSHPEVIRVRSLLESGQWNVAKDAGVLADIIQD GWTGRTGSLSFHELSERVIHILGSADPDCVPAPPDSFYELLESRCRDWLRNASRDPNWKGADEYVLACRSVGHDV DLDEWR* |
| Coding | >Hirsu2|3751 ATGAGAATCATACTACCTCTCCAGCAACCCCCTAAAGAATGTCTCAGCATAGGTCCGTCCCAAGGCTTGGTCTAC GGCCTCGACAGAGACATCGTTCTCAAGCTTCCCTTTCAGTATGAGGTGACTTCAGATCTCGACATGGCCCATTGT TGGGACCTCTCGCTCGGCTGCTTTGTGGCTATGGAGAAGGAGCTGGCCGTCTACGACGCCCTGCGAGGCCAGCCG CACGCCAATTTTGCTCGGAGACTGGCACCTGACCAATCGGAGTACTTGTTTCTAGAGCGGCTTCGGCCGTTACGA AGCGTATGGCCTGATGCGGGCCATCGAGACCGACGGCGCTGGGTGCTAGAGTTCCTTGCCGCTATCGGCTGGCTC GAGAAACTCGGCTTTGTCAACGGCGACCTGGCCGTGCGGAACCTAGGCGTCGATCAGGCTAATCGCCTTAAGCTT TTCGATTTTGGATCTGCCACTCCACGCTCCCACCCCGACTACTCCAACGATGTCAGAAGAGACCACTTCCATCTA GCGACTTGCCTGCATTTCCTATTATCGGGGATTGATCCTTTTGACAATATTAATTCCCACCCTGAAGTCATTAGG GTTCGATCGCTATTAGAGTCCGGGCAATGGAATGTCGCCAAAGATGCTGGGGTCTTGGCTGATATTATCCAGGAC GGGTGGACGGGCAGGACGGGATCTCTGTCTTTCCACGAGCTTTCGGAACGAGTCATTCATATTCTTGGCTCCGCC GATCCTGACTGTGTGCCGGCACCGCCAGACAGCTTCTACGAGCTTCTCGAGTCTCGATGTAGGGATTGGCTTCGT AATGCATCACGGGATCCCAATTGGAAGGGTGCTGATGAGTACGTTTTGGCGTGCCGGAGCGTGGGCCATGACGTG GATCTAGACGAGTGGCGTTGA |
| Transcript | >Hirsu2|3751 ATGAGAATCATACTACCTCTCCAGCAACCCCCTAAAGAATGTCTCAGCATAGGTCCGTCCCAAGGCTTGGTCTAC GGCCTCGACAGAGACATCGTTCTCAAGCTTCCCTTTCAGTATGAGGTGACTTCAGATCTCGACATGGCCCATTGT TGGGACCTCTCGCTCGGCTGCTTTGTGGCTATGGAGAAGGAGCTGGCCGTCTACGACGCCCTGCGAGGCCAGCCG CACGCCAATTTTGCTCGGAGACTGGCACCTGACCAATCGGAGTACTTGTTTCTAGAGCGGCTTCGGCCGTTACGA AGCGTATGGCCTGATGCGGGCCATCGAGACCGACGGCGCTGGGTGCTAGAGTTCCTTGCCGCTATCGGCTGGCTC GAGAAACTCGGCTTTGTCAACGGCGACCTGGCCGTGCGGAACCTAGGCGTCGATCAGGCTAATCGCCTTAAGCTT TTCGATTTTGGATCTGCCACTCCACGCTCCCACCCCGACTACTCCAACGATGTCAGAAGAGACCACTTCCATCTA GCGACTTGCCTGCATTTCCTATTATCGGGGATTGATCCTTTTGACAATATTAATTCCCACCCTGAAGTCATTAGG GTTCGATCGCTATTAGAGTCCGGGCAATGGAATGTCGCCAAAGATGCTGGGGTCTTGGCTGATATTATCCAGGAC GGGTGGACGGGCAGGACGGGATCTCTGTCTTTCCACGAGCTTTCGGAACGAGTCATTCATATTCTTGGCTCCGCC GATCCTGACTGTGTGCCGGCACCGCCAGACAGCTTCTACGAGCTTCTCGAGTCTCGATGTAGGGATTGGCTTCGT AATGCATCACGGGATCCCAATTGGAAGGGTGCTGATGAGTACGTTTTGGCGTGCCGGAGCGTGGGCCATGACGTG GATCTAGACGAGTGGCGTTGA |
| Gene | >Hirsu2|3751 ATGAGAATCATACTACCTCTCCAGCAACCCCCTAAAGAATGTCTCAGCATAGGTCCGTCCCAAGGCTTGGTCTAC GGCCTCGACAGAGACATCGTTCTCAAGCTTCCCTTTCAGTATGAGGTGACTTCAGATCTCGACATGGCCCATTGT TGGGACCTCTCGCTCGGCTGCTTTGTGGCTATGGAGAAGGAGCTGGCCGTCTACGACGCCCTGCGAGGCCAGCCG CACGCCAATTTTGCTCGGAGACTGGCACCTGACCAATCGGAGTACTTGTTTCTAGAGCGGCTTCGGCCGTTACGA AGCGTATGGCCTGATGCGGGCCATCGAGACCGACGGCGCTGGGTGCTAGAGTTCCTTGCCGCTATCGGCTGGCTC GAGAAACTCGGCTTTGTCAACGGCGACCTGGCCGTGCGGAACCTAGGCGTCGATCAGGCTAATCGCCTTAAGCTT TTCGATTTTGGATCTGCCACTCCACGCTCCCACCCCGACTACTCCAACGATGTCAGAAGAGACCACTTCCATCTA GCGACTTGCCTGCATTTCCTATTATCGGGGATTGATCCTTTTGACAATATTAATTCCCACCCTGAAGTCATTAGG GTTCGATCGCTATTAGAGTCCGGGCAATGGAATGTCGCCAAAGATGCTGGGGTCTTGGCTGATATTATCCAGGAC GGGTGGACGGGCAGGACGGGATCTCTGTCTTTCCACGAGCTTTCGGAACGAGTCATTCATATTCTTGGCTCCGCC GATCCTGACTGTGTGCCGGCACCGCCAGACAGCTTCTACGAGCTTCTCGAGTCTCGATGTAGGGATTGGCTTCGT AATGCATCACGGGATCCCAATTGGAAGGGTGCTGATGAGTACGTTTTGGCGTGCCGGAGCGTGGGCCATGACGTG GATCTAGACGAGTGGCGTTGA |