Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3750
Gene name
LocationContig_20:40299..40998
Strand-
Gene length (bp)699
Transcript length (bp)645
Coding sequence length (bp)645
Protein length (aa) 215

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5251 0.4314 0.0749 0.1883 0.4025 0.0259 0.1584 0.1647 0.2359 0.0466

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup44
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1453
Ophiocordyceps australis 1348a (Ghana) OphauG2|6600
Ophiocordyceps australis map64 (Brazil) OphauB2|6861
Ophiocordyceps australis map64 (Brazil) OphauB2|7954
Ophiocordyceps camponoti-floridani Ophcf2|03720
Ophiocordyceps camponoti-floridani Ophcf2|05954
Ophiocordyceps camponoti-floridani Ophcf2|05172
Ophiocordyceps camponoti-floridani Ophcf2|02221
Ophiocordyceps camponoti-rufipedis Ophun1|2937
Ophiocordyceps camponoti-rufipedis Ophun1|4696
Ophiocordyceps camponoti-rufipedis Ophun1|5999
Ophiocordyceps kimflemingae Ophio5|3407
Ophiocordyceps kimflemingae Ophio5|3459
Ophiocordyceps kimflemingae Ophio5|3513
Ophiocordyceps kimflemingae Ophio5|4248
Ophiocordyceps kimflemingae Ophio5|4365
Ophiocordyceps subramaniannii Hirsu2|3750 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2355
Ophiocordyceps subramaniannii Hirsu2|22
Ophiocordyceps subramaniannii Hirsu2|9307
Ophiocordyceps subramaniannii Hirsu2|10348

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3750
MTGKLRLSGLEKQAEAAGFHRFEWVMDHFKEGDKIARSSAPHYDDRVGKDETQDMAADSIKFLKQQGITHVISLN
HYADNDKIRKALQQANIAYTPLPTKDFSPPTKEQLQEAWKAFSKYPASSLVYCGYGHGRTGTLISALQIYAESEK
SSPGSLTRADYDKNHVEKDTQRQLLDTLQKELRLKGAKAKGPKTSASSNGSDMPPKKKKGRQRN*
Coding >Hirsu2|3750
ATGACCGGAAAACTGCGACTTTCAGGCCTTGAAAAGCAAGCTGAGGCGGCAGGATTTCACCGGTTTGAGTGGGTA
ATGGACCATTTTAAAGAGGGAGATAAGATTGCTCGCTCCTCTGCGCCTCATTATGACGATAGAGTTGGCAAAGAC
GAGACGCAAGATATGGCTGCGGATTCTATTAAGTTTCTAAAGCAACAAGGCATCACTCACGTTATTAGCCTAAAC
CACTATGCGGATAACGATAAGATTCGGAAAGCGCTCCAACAGGCTAACATTGCTTATACGCCCTTGCCCACTAAA
GATTTTAGTCCACCGACTAAAGAGCAGCTTCAAGAGGCTTGGAAGGCCTTTTCCAAGTATCCAGCCTCATCGCTA
GTCTACTGTGGCTACGGGCACGGGCGAACAGGGACGCTGATCTCAGCGCTCCAGATCTATGCAGAGAGCGAAAAG
TCTTCCCCTGGAAGTCTCACACGTGCCGACTACGATAAGAATCACGTAGAGAAGGATACTCAGCGGCAGCTCCTG
GACACCCTGCAGAAAGAGCTAAGATTAAAAGGAGCAAAAGCGAAGGGGCCCAAGACAAGTGCCAGCAGCAATGGC
TCGGATATGCCGCCAAAAAAGAAGAAGGGCCGTCAGCGAAATTAG
Transcript >Hirsu2|3750
ATGACCGGAAAACTGCGACTTTCAGGCCTTGAAAAGCAAGCTGAGGCGGCAGGATTTCACCGGTTTGAGTGGGTA
ATGGACCATTTTAAAGAGGGAGATAAGATTGCTCGCTCCTCTGCGCCTCATTATGACGATAGAGTTGGCAAAGAC
GAGACGCAAGATATGGCTGCGGATTCTATTAAGTTTCTAAAGCAACAAGGCATCACTCACGTTATTAGCCTAAAC
CACTATGCGGATAACGATAAGATTCGGAAAGCGCTCCAACAGGCTAACATTGCTTATACGCCCTTGCCCACTAAA
GATTTTAGTCCACCGACTAAAGAGCAGCTTCAAGAGGCTTGGAAGGCCTTTTCCAAGTATCCAGCCTCATCGCTA
GTCTACTGTGGCTACGGGCACGGGCGAACAGGGACGCTGATCTCAGCGCTCCAGATCTATGCAGAGAGCGAAAAG
TCTTCCCCTGGAAGTCTCACACGTGCCGACTACGATAAGAATCACGTAGAGAAGGATACTCAGCGGCAGCTCCTG
GACACCCTGCAGAAAGAGCTAAGATTAAAAGGAGCAAAAGCGAAGGGGCCCAAGACAAGTGCCAGCAGCAATGGC
TCGGATATGCCGCCAAAAAAGAAGAAGGGCCGTCAGCGAAATTAG
Gene >Hirsu2|3750
ATGACCGGAGTACGTTCCCATCGTTTGTTCGTGATCTCTACCGGTATACGAATTTCTAACCAGAAACTGCGACTT
TCAGGCCTTGAAAAGCAAGCTGAGGCGGCAGGATTTCACCGGTTTGAGTGGGTAATGGACCATTTTAAAGAGGGA
GATAAGATTGCTCGCTCCTCTGCGCCTCATTATGACGATAGAGTTGGCAAAGACGAGACGCAAGATATGGCTGCG
GATTCTATTAAGTTTCTAAAGCAACAAGGCATCACTCACGTTATTAGCCTAAACCACTATGCGGATAACGATAAG
ATTCGGAAAGCGCTCCAACAGGCTAACATTGCTTATACGCCCTTGCCCACTAAAGATTTTAGTCCACCGACTAAA
GAGCAGCTTCAAGAGGCTTGGAAGGCCTTTTCCAAGTATCCAGCCTCATCGCTAGTCTACTGTGGCTACGGGCAC
GGGCGAACAGGGACGCTGATCTCAGCGCTCCAGATCTATGCAGAGAGCGAAAAGTCTTCCCCTGGAAGTCTCACA
CGTGCCGACTACGATAAGAATCACGTAGAGAAGGATACTCAGCGGCAGCTCCTGGACACCCTGCAGAAAGAGCTA
AGATTAAAAGGAGCAAAAGCGAAGGGGCCCAAGACAAGTGCCAGCAGCAATGGCTCGGATATGCCGCCAAAAAAG
AAGAAGGGCCGTCAGCGAAATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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