Protein ID | Hirsu2|3750 |
Gene name | |
Location | Contig_20:40299..40998 |
Strand | - |
Gene length (bp) | 699 |
Transcript length (bp) | 645 |
Coding sequence length (bp) | 645 |
Protein length (aa) | 215 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.5251 | 0.4314 | 0.0749 | 0.1883 | 0.4025 | 0.0259 | 0.1584 | 0.1647 | 0.2359 | 0.0466 |
Orthofinder run ID | 4 |
Orthogroup | 44 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3750 MTGKLRLSGLEKQAEAAGFHRFEWVMDHFKEGDKIARSSAPHYDDRVGKDETQDMAADSIKFLKQQGITHVISLN HYADNDKIRKALQQANIAYTPLPTKDFSPPTKEQLQEAWKAFSKYPASSLVYCGYGHGRTGTLISALQIYAESEK SSPGSLTRADYDKNHVEKDTQRQLLDTLQKELRLKGAKAKGPKTSASSNGSDMPPKKKKGRQRN* |
Coding | >Hirsu2|3750 ATGACCGGAAAACTGCGACTTTCAGGCCTTGAAAAGCAAGCTGAGGCGGCAGGATTTCACCGGTTTGAGTGGGTA ATGGACCATTTTAAAGAGGGAGATAAGATTGCTCGCTCCTCTGCGCCTCATTATGACGATAGAGTTGGCAAAGAC GAGACGCAAGATATGGCTGCGGATTCTATTAAGTTTCTAAAGCAACAAGGCATCACTCACGTTATTAGCCTAAAC CACTATGCGGATAACGATAAGATTCGGAAAGCGCTCCAACAGGCTAACATTGCTTATACGCCCTTGCCCACTAAA GATTTTAGTCCACCGACTAAAGAGCAGCTTCAAGAGGCTTGGAAGGCCTTTTCCAAGTATCCAGCCTCATCGCTA GTCTACTGTGGCTACGGGCACGGGCGAACAGGGACGCTGATCTCAGCGCTCCAGATCTATGCAGAGAGCGAAAAG TCTTCCCCTGGAAGTCTCACACGTGCCGACTACGATAAGAATCACGTAGAGAAGGATACTCAGCGGCAGCTCCTG GACACCCTGCAGAAAGAGCTAAGATTAAAAGGAGCAAAAGCGAAGGGGCCCAAGACAAGTGCCAGCAGCAATGGC TCGGATATGCCGCCAAAAAAGAAGAAGGGCCGTCAGCGAAATTAG |
Transcript | >Hirsu2|3750 ATGACCGGAAAACTGCGACTTTCAGGCCTTGAAAAGCAAGCTGAGGCGGCAGGATTTCACCGGTTTGAGTGGGTA ATGGACCATTTTAAAGAGGGAGATAAGATTGCTCGCTCCTCTGCGCCTCATTATGACGATAGAGTTGGCAAAGAC GAGACGCAAGATATGGCTGCGGATTCTATTAAGTTTCTAAAGCAACAAGGCATCACTCACGTTATTAGCCTAAAC CACTATGCGGATAACGATAAGATTCGGAAAGCGCTCCAACAGGCTAACATTGCTTATACGCCCTTGCCCACTAAA GATTTTAGTCCACCGACTAAAGAGCAGCTTCAAGAGGCTTGGAAGGCCTTTTCCAAGTATCCAGCCTCATCGCTA GTCTACTGTGGCTACGGGCACGGGCGAACAGGGACGCTGATCTCAGCGCTCCAGATCTATGCAGAGAGCGAAAAG TCTTCCCCTGGAAGTCTCACACGTGCCGACTACGATAAGAATCACGTAGAGAAGGATACTCAGCGGCAGCTCCTG GACACCCTGCAGAAAGAGCTAAGATTAAAAGGAGCAAAAGCGAAGGGGCCCAAGACAAGTGCCAGCAGCAATGGC TCGGATATGCCGCCAAAAAAGAAGAAGGGCCGTCAGCGAAATTAG |
Gene | >Hirsu2|3750 ATGACCGGAGTACGTTCCCATCGTTTGTTCGTGATCTCTACCGGTATACGAATTTCTAACCAGAAACTGCGACTT TCAGGCCTTGAAAAGCAAGCTGAGGCGGCAGGATTTCACCGGTTTGAGTGGGTAATGGACCATTTTAAAGAGGGA GATAAGATTGCTCGCTCCTCTGCGCCTCATTATGACGATAGAGTTGGCAAAGACGAGACGCAAGATATGGCTGCG GATTCTATTAAGTTTCTAAAGCAACAAGGCATCACTCACGTTATTAGCCTAAACCACTATGCGGATAACGATAAG ATTCGGAAAGCGCTCCAACAGGCTAACATTGCTTATACGCCCTTGCCCACTAAAGATTTTAGTCCACCGACTAAA GAGCAGCTTCAAGAGGCTTGGAAGGCCTTTTCCAAGTATCCAGCCTCATCGCTAGTCTACTGTGGCTACGGGCAC GGGCGAACAGGGACGCTGATCTCAGCGCTCCAGATCTATGCAGAGAGCGAAAAGTCTTCCCCTGGAAGTCTCACA CGTGCCGACTACGATAAGAATCACGTAGAGAAGGATACTCAGCGGCAGCTCCTGGACACCCTGCAGAAAGAGCTA AGATTAAAAGGAGCAAAAGCGAAGGGGCCCAAGACAAGTGCCAGCAGCAATGGCTCGGATATGCCGCCAAAAAAG AAGAAGGGCCGTCAGCGAAATTAG |