Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3742
Gene name
LocationContig_20:10549..11947
Strand-
Gene length (bp)1398
Transcript length (bp)1398
Coding sequence length (bp)1398
Protein length (aa) 466

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 92 114 22
2 169 191 22
3 206 228 22
4 261 280 19
5 284 303 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3742
MLSSELVPSAGPGEVRNASSNDIRDTTAGTDANADKDSDGIAVKLVRGKNGRLDYVPRTRLLNDLSWAVGLMELA
NAGDFAANVWNEVPVPVYAVVFMAIGGTVAAAMCVVAFHDARLACRNVRFLRRQRRDQKAERAARQERGQSTLDL
DVYLSVTFRELGSEIVTRWLTNLLMGCGALIISIGTFMAIGGANPTVWFASNVLSGYLGNAPIALYGVVTLLWAS
YVFCKAQGHIWATRRSLRGTKAAALVRRRARTVQAFCVVNGTAAVLGGVASLLTATQWWAYVMLIPVIAASVFCN
VWWRRRVGYSRAKSPAGANEFPALSLANLVVEVESAARAGAAIRGRKASPIDEFVADPTSLAQVLRFLQRNMLLE
VFCLKACSVPHLCRALGADQDTEVTIGVDQLLAVSKECQATLLEMARECAEELGSENLEYRQRYTAELLGTYCRL
VGGVGGGSGIDVDEK*
Coding >Hirsu2|3742
ATGCTCAGCAGCGAGCTCGTTCCATCAGCCGGCCCTGGCGAGGTGCGCAATGCTTCGAGCAACGACATTCGAGAC
ACGACCGCCGGAACGGACGCGAACGCGGATAAAGACAGCGACGGCATCGCTGTAAAGCTCGTCAGGGGGAAGAAC
GGCCGGCTCGATTATGTACCCAGAACGCGGCTCCTCAACGACCTCTCGTGGGCAGTGGGCCTGATGGAGCTCGCC
AACGCGGGTGACTTCGCGGCAAACGTATGGAACGAGGTGCCCGTGCCCGTCTACGCCGTCGTCTTCATGGCCATA
GGCGGGACGGTGGCGGCGGCTATGTGTGTCGTTGCCTTCCACGATGCGAGGCTCGCGTGCCGCAACGTGCGTTTC
CTTCGACGCCAGCGCCGAGACCAAAAAGCAGAGCGGGCCGCGAGACAGGAGCGTGGCCAGTCGACGCTGGACTTG
GACGTCTACCTCTCCGTCACGTTCCGCGAGCTCGGGAGCGAAATCGTCACTCGCTGGCTCACCAACCTCCTCATG
GGCTGCGGTGCGCTCATCATCTCCATCGGCACGTTCATGGCCATAGGCGGTGCCAACCCAACCGTGTGGTTTGCC
AGTAACGTCCTGTCCGGATACCTTGGCAATGCCCCGATCGCCCTATACGGCGTGGTAACCTTGCTCTGGGCCTCC
TACGTCTTCTGCAAGGCCCAGGGCCATATCTGGGCGACACGCCGGTCTCTTAGGGGCACCAAGGCCGCGGCTCTC
GTCAGGCGGCGCGCCCGCACTGTTCAGGCCTTCTGCGTCGTCAACGGCACGGCGGCGGTGCTGGGCGGCGTTGCG
TCGTTGCTGACGGCCACGCAGTGGTGGGCATACGTCATGCTCATCCCCGTCATCGCCGCCTCGGTCTTCTGCAAC
GTGTGGTGGCGCCGGCGCGTCGGATACTCCCGTGCAAAGTCGCCCGCCGGGGCGAACGAGTTCCCAGCCCTCAGC
CTGGCCAATCTCGTCGTGGAAGTCGAGTCCGCCGCTCGAGCCGGAGCTGCCATTCGGGGACGAAAGGCTTCTCCG
ATCGACGAGTTCGTTGCGGACCCGACCTCTCTCGCCCAGGTTCTCCGTTTTCTCCAACGAAATATGCTTCTTGAA
GTCTTCTGTCTCAAGGCCTGCTCGGTACCGCACCTGTGCCGCGCCCTGGGCGCCGATCAGGACACCGAGGTAACC
ATTGGCGTGGATCAGTTGCTGGCCGTGTCAAAAGAATGCCAAGCCACATTGCTCGAAATGGCTCGGGAGTGTGCC
GAAGAGCTTGGCTCCGAGAATTTAGAGTATCGACAGCGATATACTGCGGAACTTTTGGGTACATATTGCAGACTT
GTTGGTGGTGTAGGCGGTGGTAGTGGCATCGACGTCGACGAAAAATAG
Transcript >Hirsu2|3742
ATGCTCAGCAGCGAGCTCGTTCCATCAGCCGGCCCTGGCGAGGTGCGCAATGCTTCGAGCAACGACATTCGAGAC
ACGACCGCCGGAACGGACGCGAACGCGGATAAAGACAGCGACGGCATCGCTGTAAAGCTCGTCAGGGGGAAGAAC
GGCCGGCTCGATTATGTACCCAGAACGCGGCTCCTCAACGACCTCTCGTGGGCAGTGGGCCTGATGGAGCTCGCC
AACGCGGGTGACTTCGCGGCAAACGTATGGAACGAGGTGCCCGTGCCCGTCTACGCCGTCGTCTTCATGGCCATA
GGCGGGACGGTGGCGGCGGCTATGTGTGTCGTTGCCTTCCACGATGCGAGGCTCGCGTGCCGCAACGTGCGTTTC
CTTCGACGCCAGCGCCGAGACCAAAAAGCAGAGCGGGCCGCGAGACAGGAGCGTGGCCAGTCGACGCTGGACTTG
GACGTCTACCTCTCCGTCACGTTCCGCGAGCTCGGGAGCGAAATCGTCACTCGCTGGCTCACCAACCTCCTCATG
GGCTGCGGTGCGCTCATCATCTCCATCGGCACGTTCATGGCCATAGGCGGTGCCAACCCAACCGTGTGGTTTGCC
AGTAACGTCCTGTCCGGATACCTTGGCAATGCCCCGATCGCCCTATACGGCGTGGTAACCTTGCTCTGGGCCTCC
TACGTCTTCTGCAAGGCCCAGGGCCATATCTGGGCGACACGCCGGTCTCTTAGGGGCACCAAGGCCGCGGCTCTC
GTCAGGCGGCGCGCCCGCACTGTTCAGGCCTTCTGCGTCGTCAACGGCACGGCGGCGGTGCTGGGCGGCGTTGCG
TCGTTGCTGACGGCCACGCAGTGGTGGGCATACGTCATGCTCATCCCCGTCATCGCCGCCTCGGTCTTCTGCAAC
GTGTGGTGGCGCCGGCGCGTCGGATACTCCCGTGCAAAGTCGCCCGCCGGGGCGAACGAGTTCCCAGCCCTCAGC
CTGGCCAATCTCGTCGTGGAAGTCGAGTCCGCCGCTCGAGCCGGAGCTGCCATTCGGGGACGAAAGGCTTCTCCG
ATCGACGAGTTCGTTGCGGACCCGACCTCTCTCGCCCAGGTTCTCCGTTTTCTCCAACGAAATATGCTTCTTGAA
GTCTTCTGTCTCAAGGCCTGCTCGGTACCGCACCTGTGCCGCGCCCTGGGCGCCGATCAGGACACCGAGGTAACC
ATTGGCGTGGATCAGTTGCTGGCCGTGTCAAAAGAATGCCAAGCCACATTGCTCGAAATGGCTCGGGAGTGTGCC
GAAGAGCTTGGCTCCGAGAATTTAGAGTATCGACAGCGATATACTGCGGAACTTTTGGGTACATATTGCAGACTT
GTTGGTGGTGTAGGCGGTGGTAGTGGCATCGACGTCGACGAAAAATAG
Gene >Hirsu2|3742
ATGCTCAGCAGCGAGCTCGTTCCATCAGCCGGCCCTGGCGAGGTGCGCAATGCTTCGAGCAACGACATTCGAGAC
ACGACCGCCGGAACGGACGCGAACGCGGATAAAGACAGCGACGGCATCGCTGTAAAGCTCGTCAGGGGGAAGAAC
GGCCGGCTCGATTATGTACCCAGAACGCGGCTCCTCAACGACCTCTCGTGGGCAGTGGGCCTGATGGAGCTCGCC
AACGCGGGTGACTTCGCGGCAAACGTATGGAACGAGGTGCCCGTGCCCGTCTACGCCGTCGTCTTCATGGCCATA
GGCGGGACGGTGGCGGCGGCTATGTGTGTCGTTGCCTTCCACGATGCGAGGCTCGCGTGCCGCAACGTGCGTTTC
CTTCGACGCCAGCGCCGAGACCAAAAAGCAGAGCGGGCCGCGAGACAGGAGCGTGGCCAGTCGACGCTGGACTTG
GACGTCTACCTCTCCGTCACGTTCCGCGAGCTCGGGAGCGAAATCGTCACTCGCTGGCTCACCAACCTCCTCATG
GGCTGCGGTGCGCTCATCATCTCCATCGGCACGTTCATGGCCATAGGCGGTGCCAACCCAACCGTGTGGTTTGCC
AGTAACGTCCTGTCCGGATACCTTGGCAATGCCCCGATCGCCCTATACGGCGTGGTAACCTTGCTCTGGGCCTCC
TACGTCTTCTGCAAGGCCCAGGGCCATATCTGGGCGACACGCCGGTCTCTTAGGGGCACCAAGGCCGCGGCTCTC
GTCAGGCGGCGCGCCCGCACTGTTCAGGCCTTCTGCGTCGTCAACGGCACGGCGGCGGTGCTGGGCGGCGTTGCG
TCGTTGCTGACGGCCACGCAGTGGTGGGCATACGTCATGCTCATCCCCGTCATCGCCGCCTCGGTCTTCTGCAAC
GTGTGGTGGCGCCGGCGCGTCGGATACTCCCGTGCAAAGTCGCCCGCCGGGGCGAACGAGTTCCCAGCCCTCAGC
CTGGCCAATCTCGTCGTGGAAGTCGAGTCCGCCGCTCGAGCCGGAGCTGCCATTCGGGGACGAAAGGCTTCTCCG
ATCGACGAGTTCGTTGCGGACCCGACCTCTCTCGCCCAGGTTCTCCGTTTTCTCCAACGAAATATGCTTCTTGAA
GTCTTCTGTCTCAAGGCCTGCTCGGTACCGCACCTGTGCCGCGCCCTGGGCGCCGATCAGGACACCGAGGTAACC
ATTGGCGTGGATCAGTTGCTGGCCGTGTCAAAAGAATGCCAAGCCACATTGCTCGAAATGGCTCGGGAGTGTGCC
GAAGAGCTTGGCTCCGAGAATTTAGAGTATCGACAGCGATATACTGCGGAACTTTTGGGTACATATTGCAGACTT
GTTGGTGGTGTAGGCGGTGGTAGTGGCATCGACGTCGACGAAAAATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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