Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3741
Gene name
LocationContig_20:9183..10156
Strand+
Gene length (bp)973
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.4346 0.2992 0.5083 0.1365 0.3162 0.1108 0.1885 0.2767 0.2818 0.1088

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2537
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2315
Ophiocordyceps australis map64 (Brazil) OphauB2|5093
Ophiocordyceps camponoti-floridani Ophcf2|05888
Ophiocordyceps camponoti-rufipedis Ophun1|385
Ophiocordyceps kimflemingae Ophio5|1506
Ophiocordyceps subramaniannii Hirsu2|3741 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3741
MAPITHWSGVDDLPINKPPAHAPHRSSDVPSDDDMGFNDPQNVLYVNMEGKDLSDPKLKPRLDELEQMCQLTHQL
ATIHAGIQVKQRKEEGSLPTDDSDDSRWRRAQYRARVVDTYFQDGVYPWLFSPSFNSVDKSIDVERSKFHWELLA
LMLAGIVVPRPLAASLEAIFKGIGDTISETNYTAERRTFWSLLQVYTYDEVRKDLRASFRNVTYTLDQEMYTVSR
GKSSQTTIRVRFHFSQNDFSFNETTWKSMKPTVERYIRDTGIGNITNPPTVPV*
Coding >Hirsu2|3741
ATGGCTCCCATCACTCACTGGTCTGGTGTGGACGACCTTCCCATCAACAAGCCTCCCGCCCATGCCCCACACCGT
AGCAGCGACGTGCCGAGTGACGATGACATGGGCTTCAATGACCCACAAAATGTCCTCTATGTCAATATGGAAGGC
AAAGATCTATCTGACCCCAAGTTGAAGCCTCGCTTAGACGAGCTCGAACAAATGTGCCAACTGACTCATCAGCTG
GCAACCATTCACGCTGGAATACAAGTCAAGCAGCGGAAAGAAGAGGGCAGCCTGCCGACCGATGATAGCGACGAC
TCTCGCTGGAGACGCGCTCAATACCGTGCCAGGGTCGTGGATACCTATTTCCAGGATGGCGTTTATCCATGGTTG
TTCAGCCCTTCTTTCAACAGCGTCGACAAGTCAATCGACGTCGAAAGAAGCAAGTTTCACTGGGAACTGCTCGCC
CTCATGTTGGCCGGGATTGTGGTTCCCAGGCCGCTCGCAGCATCGCTCGAAGCCATATTCAAGGGTATCGGAGAC
ACTATCAGTGAGACAAACTACACTGCTGAGCGTCGGACTTTCTGGAGTCTGCTTCAAGTGTATACATACGATGAA
GTGCGGAAGGACCTGCGCGCCTCGTTTCGAAACGTCACGTATACCTTGGACCAGGAGATGTATACGGTCTCGAGA
GGCAAAAGCAGCCAGACGACAATCAGGGTCAGATTCCACTTTAGTCAAAACGACTTTTCGTTTAACGAAACCACG
TGGAAGTCTATGAAGCCTACAGTTGAAAGATACATCCGGGACACTGGCATTGGAAACATTACCAACCCGCCTACC
GTTCCAGTCTAA
Transcript >Hirsu2|3741
ATGGCTCCCATCACTCACTGGTCTGGTGTGGACGACCTTCCCATCAACAAGCCTCCCGCCCATGCCCCACACCGT
AGCAGCGACGTGCCGAGTGACGATGACATGGGCTTCAATGACCCACAAAATGTCCTCTATGTCAATATGGAAGGC
AAAGATCTATCTGACCCCAAGTTGAAGCCTCGCTTAGACGAGCTCGAACAAATGTGCCAACTGACTCATCAGCTG
GCAACCATTCACGCTGGAATACAAGTCAAGCAGCGGAAAGAAGAGGGCAGCCTGCCGACCGATGATAGCGACGAC
TCTCGCTGGAGACGCGCTCAATACCGTGCCAGGGTCGTGGATACCTATTTCCAGGATGGCGTTTATCCATGGTTG
TTCAGCCCTTCTTTCAACAGCGTCGACAAGTCAATCGACGTCGAAAGAAGCAAGTTTCACTGGGAACTGCTCGCC
CTCATGTTGGCCGGGATTGTGGTTCCCAGGCCGCTCGCAGCATCGCTCGAAGCCATATTCAAGGGTATCGGAGAC
ACTATCAGTGAGACAAACTACACTGCTGAGCGTCGGACTTTCTGGAGTCTGCTTCAAGTGTATACATACGATGAA
GTGCGGAAGGACCTGCGCGCCTCGTTTCGAAACGTCACGTATACCTTGGACCAGGAGATGTATACGGTCTCGAGA
GGCAAAAGCAGCCAGACGACAATCAGGGTCAGATTCCACTTTAGTCAAAACGACTTTTCGTTTAACGAAACCACG
TGGAAGTCTATGAAGCCTACAGTTGAAAGATACATCCGGGACACTGGCATTGGAAACATTACCAACCCGCCTACC
GTTCCAGTCTAA
Gene >Hirsu2|3741
ATGGCTCCCATCACTCACTGGTCTGGTGTGGACGACCTTCCCATCAACAAGCCTCCCGCCCATGCCCCACACCGT
AGCAGCGACGTGCCGAGTGACGATGACATGGGCTTCAATGACCCACAAAATGTCCTCTATGTCAATATGGAAGGC
AAAGATCTATCTGACCCCAAGTTGAAGCCTCGCTTAGACGAGCTCGAACAAATGTGCCAACTGACTCATCAGCTG
GCAACCATTCACGCTGGAATACAAGTCAAGCAGCGGAAAGAAGAGGGCAGCCTGCCGACCGATGATAGCGACGAC
TCTCGCTGGAGACGCGCTCAATACCGTGCCAGGGTCGTGGATACCTATTTCCAGGATGGCGTTTATCCATGGTGT
GTATTTGTGCCTGGGTCAGATCGATGACACTTACATGTAGACAAGGCTGATAGTGTTGCAGGTTGTTCAGCCCTT
CTTTCAACAGCGTCGACAAGTCAATCGACGTCGAAAGAAGCAAGTTTCACTGGGAACTGCTCGCCCTCATGTTGG
CCGGGATTGTGGTTCCCAGGCCGCTCGCAGCATCGCTCGAAGCCATATTCAAGGGTATCGGAGACACTATCAGTG
AGACAAACTACACTGCTGAGCGTCGGACTTTCTGGAGTCTGCTTCAAGTGTATACATACGATGAAGTGCGGAAGG
ACCTGCGCGCCTGTAAGTACACGCAGCGAGGCTTTTTAAGGGTTTGGAATTTGGAGAGACATAGTCAACTAACTA
GACCAAAGCGTTTCGAAACGTCACGTATACCTTGGACCAGGAGATGTATACGGTCTCGAGAGGCAAAAGCAGCCA
GACGACAATCAGGGTCAGATTCCACTTTAGTCAAAACGACTTTTCGTTTAACGAAACCACGTGGAAGTCTATGAA
GCCTACAGTTGAAAGATACATCCGGGACACTGGCATTGGAAACATTACCAACCCGCCTACCGTTCCAGTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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