© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|374 |
| Gene name | |
| Location | Contig_1070:9024..9303 |
| Strand | + |
| Gene length (bp) | 279 |
| Transcript length (bp) | 279 |
| Coding sequence length (bp) | 279 |
| Protein length (aa) | 93 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 3.9E-07 | 21 | 85 |
| PF00890 | FAD_binding_2 | FAD binding domain | 2.4E-06 | 21 | 57 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 7.0E-06 | 23 | 53 |
| PF00070 | Pyr_redox | Pyridine nucleotide-disulphide oxidoreductase | 1.0E-04 | 20 | 67 |
| PF04820 | Trp_halogenase | Tryptophan halogenase | 1.4E-04 | 20 | 88 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9F131|3HBH1_PSEAC | 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 | 20 | 77 | 8.0E-09 |
| sp|B6D1N4|HPXO_KLEPN | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 | 19 | 75 | 7.0E-06 |
| sp|A6T923|HPXO_KLEP7 | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 | 19 | 75 | 7.0E-06 |
| sp|Q8NLB6|3HBH_CORGL | 3-hydroxybenzoate 6-hydroxylase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=Cgl3026 PE=1 SV=1 | 43 | 80 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004497 | monooxygenase activity | Yes |
| GO:0071949 | FAD binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0043168 | anion binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0000166 | nucleotide binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003824 | catalytic activity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|374 MDPDGEGRFFANRRAARPLRIVVVGAGIAGLTAGLGLKMTGHDVTILEQAAHFREAGAGIQIAPNAARVLDRFGV LEEVLRDADVLERVSVR* |
| Coding | >Hirsu2|374 ATGGATCCCGACGGCGAGGGGCGCTTCTTCGCCAACCGGCGCGCGGCCCGGCCGCTGCGCATCGTCGTCGTCGGC GCCGGCATCGCCGGCCTCACTGCCGGCCTCGGCCTCAAGATGACGGGCCACGACGTCACCATCCTCGAGCAGGCC GCCCACTTCCGCGAGGCCGGCGCCGGCATCCAGATCGCGCCCAACGCCGCCCGCGTCCTCGACCGCTTCGGCGTC CTGGAGGAGGTCCTGCGCGACGCCGACGTCCTGGAGCGGGTGTCCGTGAGGTAG |
| Transcript | >Hirsu2|374 ATGGATCCCGACGGCGAGGGGCGCTTCTTCGCCAACCGGCGCGCGGCCCGGCCGCTGCGCATCGTCGTCGTCGGC GCCGGCATCGCCGGCCTCACTGCCGGCCTCGGCCTCAAGATGACGGGCCACGACGTCACCATCCTCGAGCAGGCC GCCCACTTCCGCGAGGCCGGCGCCGGCATCCAGATCGCGCCCAACGCCGCCCGCGTCCTCGACCGCTTCGGCGTC CTGGAGGAGGTCCTGCGCGACGCCGACGTCCTGGAGCGGGTGTCCGTGAGGTAG |
| Gene | >Hirsu2|374 ATGGATCCCGACGGCGAGGGGCGCTTCTTCGCCAACCGGCGCGCGGCCCGGCCGCTGCGCATCGTCGTCGTCGGC GCCGGCATCGCCGGCCTCACTGCCGGCCTCGGCCTCAAGATGACGGGCCACGACGTCACCATCCTCGAGCAGGCC GCCCACTTCCGCGAGGCCGGCGCCGGCATCCAGATCGCGCCCAACGCCGCCCGCGTCCTCGACCGCTTCGGCGTC CTGGAGGAGGTCCTGCGCGACGCCGACGTCCTGGAGCGGGTGTCCGTGAGGTAG |