Protein ID | Hirsu2|3739 |
Gene name | |
Location | Contig_20:1161..2397 |
Strand | - |
Gene length (bp) | 1236 |
Transcript length (bp) | 1236 |
Coding sequence length (bp) | 1236 |
Protein length (aa) | 412 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01979 | Amidohydro_1 | Amidohydrolase family | 1.0E-22 | 77 | 368 |
PF07969 | Amidohydro_3 | Amidohydrolase family | 1.1E-08 | 267 | 352 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|B2KCN5|PYRC_ELUMP | Dihydroorotase OS=Elusimicrobium minutum (strain Pei191) GN=pyrC PE=3 SV=1 | 26 | 88 | 3.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016787 | hydrolase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1622 | 0.2666 | 0.5861 | 0.1254 | 0.4358 | 0.009 | 0.2412 | 0.217 | 0.2383 | 0.002 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999748 |
Orthofinder run ID | 4 |
Orthogroup | 811 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3739 MHRRTTFKALCFMFFSLSHTTQAASFTISNANIIDVNSGKIQKKQNILIQDDKIASIESAQQGQAQGDNVVDVKG QFVMPGFSDMHTHPYFTNDAKQFPTTDNSTFKEYLASGVTFIRDCGSNFDAVKSAQSRIAAKQLLGPRIASVGPM LDGKDTGFQTVEKIGSAQEANSVVSDLTSQGADYIKVHLKLTADAFGAIATACQQNNISFGGHVPDQINARTAVQ KGMRIFEHMSRIESDNDVALLRGNEFTATCTLVQGPTPQRMKTCAGLQKGQTRVLSGTDSPAGQGLCPGRSLHRE LELMNQAGLSPLEVLQSTTIRAAEAVNMENEIGTVEVGKFADLVILTKNPLEDIKNTRNVAGVVANGTYLSAQDI QKLRSAANVAKTLPFACGDSKAQKLAARTAVTCCSA* |
Coding | >Hirsu2|3739 ATGCATCGACGAACGACCTTCAAGGCGCTATGCTTCATGTTTTTCTCCTTATCACATACCACACAAGCCGCGTCG TTCACGATTTCCAACGCCAATATTATTGATGTGAACTCCGGTAAAATTCAAAAGAAGCAGAACATTCTTATCCAG GATGATAAGATCGCGAGTATTGAGAGTGCACAGCAAGGGCAGGCGCAGGGCGATAACGTCGTTGATGTTAAAGGC CAGTTTGTTATGCCGGGCTTCAGCGACATGCACACTCACCCCTACTTCACGAACGATGCCAAGCAATTTCCGACA ACGGACAATTCGACATTCAAGGAGTATCTTGCCAGCGGCGTCACATTTATACGCGATTGCGGCAGCAACTTTGAC GCCGTCAAGTCGGCACAAAGCAGAATCGCCGCGAAACAACTCCTGGGACCGCGTATCGCCTCGGTGGGCCCAATG CTCGACGGCAAAGACACGGGCTTCCAGACGGTGGAGAAAATAGGAAGCGCCCAAGAAGCTAATAGCGTAGTGAGC GACCTCACGAGCCAAGGTGCCGACTATATTAAGGTACACCTGAAATTGACGGCGGATGCGTTTGGCGCGATAGCA ACAGCATGCCAACAGAACAATATATCCTTCGGAGGACACGTGCCCGACCAGATTAACGCAAGAACAGCCGTGCAG AAGGGTATGAGAATTTTTGAGCACATGAGTCGCATTGAAAGCGATAATGATGTCGCCCTTCTGAGAGGCAACGAG TTTACGGCTACTTGTACGCTTGTGCAAGGGCCGACACCACAGCGCATGAAGACTTGTGCCGGTCTGCAAAAGGGA CAGACCCGAGTACTCTCGGGCACAGATTCGCCGGCGGGCCAAGGCCTCTGTCCGGGTAGAAGCCTCCACCGGGAA TTAGAGCTTATGAATCAGGCCGGCCTCTCCCCGTTAGAAGTGCTCCAGTCCACGACAATCAGGGCAGCCGAGGCG GTTAACATGGAGAATGAAATAGGAACAGTCGAGGTCGGAAAGTTCGCCGATCTGGTAATTCTAACGAAGAATCCG CTCGAAGATATCAAAAATACCCGCAACGTCGCTGGCGTCGTTGCCAATGGGACTTATTTGTCGGCTCAGGATATA CAAAAACTGCGCAGTGCAGCCAATGTCGCCAAGACACTACCATTTGCGTGTGGCGACTCGAAAGCTCAGAAACTT GCAGCAAGAACTGCAGTAACGTGTTGTTCGGCATAG |
Transcript | >Hirsu2|3739 ATGCATCGACGAACGACCTTCAAGGCGCTATGCTTCATGTTTTTCTCCTTATCACATACCACACAAGCCGCGTCG TTCACGATTTCCAACGCCAATATTATTGATGTGAACTCCGGTAAAATTCAAAAGAAGCAGAACATTCTTATCCAG GATGATAAGATCGCGAGTATTGAGAGTGCACAGCAAGGGCAGGCGCAGGGCGATAACGTCGTTGATGTTAAAGGC CAGTTTGTTATGCCGGGCTTCAGCGACATGCACACTCACCCCTACTTCACGAACGATGCCAAGCAATTTCCGACA ACGGACAATTCGACATTCAAGGAGTATCTTGCCAGCGGCGTCACATTTATACGCGATTGCGGCAGCAACTTTGAC GCCGTCAAGTCGGCACAAAGCAGAATCGCCGCGAAACAACTCCTGGGACCGCGTATCGCCTCGGTGGGCCCAATG CTCGACGGCAAAGACACGGGCTTCCAGACGGTGGAGAAAATAGGAAGCGCCCAAGAAGCTAATAGCGTAGTGAGC GACCTCACGAGCCAAGGTGCCGACTATATTAAGGTACACCTGAAATTGACGGCGGATGCGTTTGGCGCGATAGCA ACAGCATGCCAACAGAACAATATATCCTTCGGAGGACACGTGCCCGACCAGATTAACGCAAGAACAGCCGTGCAG AAGGGTATGAGAATTTTTGAGCACATGAGTCGCATTGAAAGCGATAATGATGTCGCCCTTCTGAGAGGCAACGAG TTTACGGCTACTTGTACGCTTGTGCAAGGGCCGACACCACAGCGCATGAAGACTTGTGCCGGTCTGCAAAAGGGA CAGACCCGAGTACTCTCGGGCACAGATTCGCCGGCGGGCCAAGGCCTCTGTCCGGGTAGAAGCCTCCACCGGGAA TTAGAGCTTATGAATCAGGCCGGCCTCTCCCCGTTAGAAGTGCTCCAGTCCACGACAATCAGGGCAGCCGAGGCG GTTAACATGGAGAATGAAATAGGAACAGTCGAGGTCGGAAAGTTCGCCGATCTGGTAATTCTAACGAAGAATCCG CTCGAAGATATCAAAAATACCCGCAACGTCGCTGGCGTCGTTGCCAATGGGACTTATTTGTCGGCTCAGGATATA CAAAAACTGCGCAGTGCAGCCAATGTCGCCAAGACACTACCATTTGCGTGTGGCGACTCGAAAGCTCAGAAACTT GCAGCAAGAACTGCAGTAACGTGTTGTTCGGCATAG |
Gene | >Hirsu2|3739 ATGCATCGACGAACGACCTTCAAGGCGCTATGCTTCATGTTTTTCTCCTTATCACATACCACACAAGCCGCGTCG TTCACGATTTCCAACGCCAATATTATTGATGTGAACTCCGGTAAAATTCAAAAGAAGCAGAACATTCTTATCCAG GATGATAAGATCGCGAGTATTGAGAGTGCACAGCAAGGGCAGGCGCAGGGCGATAACGTCGTTGATGTTAAAGGC CAGTTTGTTATGCCGGGCTTCAGCGACATGCACACTCACCCCTACTTCACGAACGATGCCAAGCAATTTCCGACA ACGGACAATTCGACATTCAAGGAGTATCTTGCCAGCGGCGTCACATTTATACGCGATTGCGGCAGCAACTTTGAC GCCGTCAAGTCGGCACAAAGCAGAATCGCCGCGAAACAACTCCTGGGACCGCGTATCGCCTCGGTGGGCCCAATG CTCGACGGCAAAGACACGGGCTTCCAGACGGTGGAGAAAATAGGAAGCGCCCAAGAAGCTAATAGCGTAGTGAGC GACCTCACGAGCCAAGGTGCCGACTATATTAAGGTACACCTGAAATTGACGGCGGATGCGTTTGGCGCGATAGCA ACAGCATGCCAACAGAACAATATATCCTTCGGAGGACACGTGCCCGACCAGATTAACGCAAGAACAGCCGTGCAG AAGGGTATGAGAATTTTTGAGCACATGAGTCGCATTGAAAGCGATAATGATGTCGCCCTTCTGAGAGGCAACGAG TTTACGGCTACTTGTACGCTTGTGCAAGGGCCGACACCACAGCGCATGAAGACTTGTGCCGGTCTGCAAAAGGGA CAGACCCGAGTACTCTCGGGCACAGATTCGCCGGCGGGCCAAGGCCTCTGTCCGGGTAGAAGCCTCCACCGGGAA TTAGAGCTTATGAATCAGGCCGGCCTCTCCCCGTTAGAAGTGCTCCAGTCCACGACAATCAGGGCAGCCGAGGCG GTTAACATGGAGAATGAAATAGGAACAGTCGAGGTCGGAAAGTTCGCCGATCTGGTAATTCTAACGAAGAATCCG CTCGAAGATATCAAAAATACCCGCAACGTCGCTGGCGTCGTTGCCAATGGGACTTATTTGTCGGCTCAGGATATA CAAAAACTGCGCAGTGCAGCCAATGTCGCCAAGACACTACCATTTGCGTGTGGCGACTCGAAAGCTCAGAAACTT GCAGCAAGAACTGCAGTAACGTGTTGTTCGGCATAG |