Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3735
Gene name
LocationContig_2:96797..97871
Strand-
Gene length (bp)1074
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1869 0.0489 0.9157 0.0793 0.146 0.007 0.2477 0.2813 0.1492 0.0086

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999675

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup810
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2613
Ophiocordyceps australis map64 (Brazil) OphauB2|6820
Ophiocordyceps camponoti-floridani Ophcf2|02728
Ophiocordyceps camponoti-rufipedis Ophun1|606
Ophiocordyceps kimflemingae Ophio5|1811
Ophiocordyceps subramaniannii Hirsu2|3735 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3735
MRGPSLSVCCALFALLASTASAANSTRSSSCKATTTGQAQAQAQAASQSPLSHRTVVQFDEETWIENIAVRQNGN
LLLTGLMPNASLYEVTNPDSQNPTVARLFTINEVKGLLGIAEISPDVFLIAGGNGGEKGSFHVWTVDFAAGDPSQ
PKMVQDIPEAMLLNGVTKIPGNNNTDVFISDSMLGLVWIVKVGEQKHEVALNVTETQLAPNGAKPLGVNGVHACN
DSLCWTNLGLTTFNKIQIGQDGKPAQGAKVEVLAKLPVSALDDFIMGPATGDTAWITTNSPDNSLFALNSAGKNV
KVAGSPDALDFATSTACQFGRKDGDKNILYVSAGNGEINGKKYGGKVEAIDVTNFAF*
Coding >Hirsu2|3735
ATGCGCGGCCCGTCGCTGAGCGTATGCTGTGCCCTGTTCGCCCTGCTGGCCTCGACGGCCTCGGCGGCGAACTCG
ACGCGAAGTTCCAGTTGCAAGGCCACGACGACCGGTCAGGCGCAGGCTCAAGCTCAGGCCGCGTCTCAGTCCCCC
CTGTCTCACCGGACCGTCGTCCAGTTCGATGAGGAAACGTGGATCGAAAACATCGCCGTCCGGCAGAACGGCAAC
CTCCTGCTCACCGGCCTGATGCCGAACGCCTCTCTCTACGAAGTCACGAACCCGGATTCGCAGAACCCAACCGTC
GCGCGCCTGTTCACCATCAACGAGGTCAAGGGCCTGCTCGGGATAGCCGAGATCTCGCCCGACGTCTTCCTGATC
GCCGGCGGCAACGGCGGGGAGAAGGGCTCGTTCCACGTCTGGACCGTCGACTTCGCCGCCGGCGACCCGTCGCAG
CCGAAGATGGTGCAGGACATCCCCGAGGCCATGCTGCTCAACGGCGTGACGAAGATCCCGGGCAACAACAACACC
GACGTCTTCATCTCGGACTCGATGCTGGGCCTCGTCTGGATCGTCAAAGTGGGCGAGCAGAAGCACGAGGTCGCG
CTCAACGTCACGGAGACGCAGCTGGCGCCCAACGGCGCCAAGCCGCTCGGCGTCAACGGCGTCCACGCCTGCAAC
GACAGCCTCTGCTGGACCAACCTCGGCCTGACGACCTTCAACAAGATCCAGATCGGCCAGGACGGCAAGCCGGCG
CAGGGCGCCAAGGTCGAGGTCCTCGCCAAGCTCCCCGTCTCGGCCCTCGACGACTTCATCATGGGGCCCGCCACC
GGCGACACGGCCTGGATCACGACAAACTCGCCCGACAACAGCCTCTTCGCCCTCAACTCGGCGGGCAAGAACGTC
AAGGTGGCCGGCAGCCCGGACGCGCTCGACTTTGCCACCTCGACGGCCTGTCAGTTTGGCAGAAAGGACGGCGAC
AAGAACATCCTGTACGTCTCGGCCGGCAACGGTGAGATCAACGGGAAGAAGTACGGAGGAAAGGTCGAGGCTATC
GATGTCACAAACTTTGCCTTTTGA
Transcript >Hirsu2|3735
ATGCGCGGCCCGTCGCTGAGCGTATGCTGTGCCCTGTTCGCCCTGCTGGCCTCGACGGCCTCGGCGGCGAACTCG
ACGCGAAGTTCCAGTTGCAAGGCCACGACGACCGGTCAGGCGCAGGCTCAAGCTCAGGCCGCGTCTCAGTCCCCC
CTGTCTCACCGGACCGTCGTCCAGTTCGATGAGGAAACGTGGATCGAAAACATCGCCGTCCGGCAGAACGGCAAC
CTCCTGCTCACCGGCCTGATGCCGAACGCCTCTCTCTACGAAGTCACGAACCCGGATTCGCAGAACCCAACCGTC
GCGCGCCTGTTCACCATCAACGAGGTCAAGGGCCTGCTCGGGATAGCCGAGATCTCGCCCGACGTCTTCCTGATC
GCCGGCGGCAACGGCGGGGAGAAGGGCTCGTTCCACGTCTGGACCGTCGACTTCGCCGCCGGCGACCCGTCGCAG
CCGAAGATGGTGCAGGACATCCCCGAGGCCATGCTGCTCAACGGCGTGACGAAGATCCCGGGCAACAACAACACC
GACGTCTTCATCTCGGACTCGATGCTGGGCCTCGTCTGGATCGTCAAAGTGGGCGAGCAGAAGCACGAGGTCGCG
CTCAACGTCACGGAGACGCAGCTGGCGCCCAACGGCGCCAAGCCGCTCGGCGTCAACGGCGTCCACGCCTGCAAC
GACAGCCTCTGCTGGACCAACCTCGGCCTGACGACCTTCAACAAGATCCAGATCGGCCAGGACGGCAAGCCGGCG
CAGGGCGCCAAGGTCGAGGTCCTCGCCAAGCTCCCCGTCTCGGCCCTCGACGACTTCATCATGGGGCCCGCCACC
GGCGACACGGCCTGGATCACGACAAACTCGCCCGACAACAGCCTCTTCGCCCTCAACTCGGCGGGCAAGAACGTC
AAGGTGGCCGGCAGCCCGGACGCGCTCGACTTTGCCACCTCGACGGCCTGTCAGTTTGGCAGAAAGGACGGCGAC
AAGAACATCCTGTACGTCTCGGCCGGCAACGGTGAGATCAACGGGAAGAAGTACGGAGGAAAGGTCGAGGCTATC
GATGTCACAAACTTTGCCTTTTGA
Gene >Hirsu2|3735
ATGCGCGGCCCGTCGCTGAGCGTATGCTGTGCCCTGTTCGCCCTGCTGGCCTCGACGGCCTCGGCGGCGAACTCG
ACGCGAAGTTCCAGTTGCAAGGCCACGACGACCGGTCAGGCGCAGGCTCAAGCTCAGGCCGCGTCTCAGTCCCCC
CTGTCTCACCGGACCGTCGTCCAGTTCGATGAGGAAACGTGGATCGAAAACATCGCCGTCCGGCAGAACGGCAAC
CTCCTGCTCACCGGCCTGATGCCGAACGCCTCTCTCTACGAAGTCACGAACCCGGATTCGCAGAACCCAACCGTC
GCGCGCCTGTTCACCATCAACGAGGTCAAGGGCCTGCTCGGGATAGCCGAGATCTCGCCCGACGTCTTCCTGATC
GCCGGCGGCAACGGCGGGGAGAAGGGCTCGTTCCACGTCTGGACCGTCGACTTCGCCGCCGGCGACCCGTCGCAG
CCGAAGATGGTGCAGGACATCCCCGAGGCCATGCTGCTCAACGGCGTGACGAAGATCCCGGGCAACAACAACACC
GACGTCTTCATCTCGGACTCGATGCTGGGCCTCGTCTGGATCGTCAAAGTGGGCGAGCAGAAGCACGAGGTCGCG
CTCAACGTCACGGAGACGCAGCTGGCGCCCAACGGCGCCAAGCCGCTCGGCGTCAACGGCGTCCACGCCTGCAAC
GACAGCCTCTGCTGGACCAACCTCGGCCTGACGACCTTCAACAAGATCCAGATCGGCCAGGACGGCAAGCCGGCG
CAGGGCGCCAAGGTCGAGGTCCTCGCCAAGCTCCCCGTCTCGGCCCTCGACGACTTCATCATGGGGCCCGCCACC
GGCGACACGGCCTGGATCACGACAAACTCGCCCGACAACAGCCTCTTCGCCCTCAACTCGGCGGGCAAGAACGTC
AAGGTGGCCGGCAGCCCGGACGCGCTCGACTTTGCCACCTCGACGGCCTGTCAGTTTGGCAGAAAGGACGGCGAC
AAGAACATCCTGTACGTCTCGGCCGGCAACGGTGAGATCAACGGGAAGAAGTACGGAGGAAAGGTCGAGGCTATC
GATGTCACAAACTTTGCCTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail