Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3727
Gene name
LocationContig_2:70611..72465
Strand-
Gene length (bp)1854
Transcript length (bp)1500
Coding sequence length (bp)1500
Protein length (aa) 500

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 90 112 22
2 183 205 22
3 215 237 22
4 250 272 22
5 282 304 22
6 317 336 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3727
MEYQEPGVPPPSKLRFFKSPVVHGDDDRRRIDKLGEFTDRDSEDGAEMPRFVRREEPTLLEVFFDLFFAANYNVF
SDNQEVTSNARFKAYIGYFYLLWLTWLLVTLFDVRYVTDSIFNRMTRAVQLGVLVGFTVVAPKFNPTNQHLETMQ
SVSLILMVSRLCLALDYGATLWHVRKVPKARIALYLQISVHLVAAVIYFGITFGFKREARSQIFVAWYFVSGVEA
ILTIFLSNLYTVLSFTMTHLIKRMTLLTVIIIGDGIIQVAREVATIVKNPDAWDGVTIGLVTSAVATIYFVFLVY
FDWLRSSFHLPPLRQQLWISTHLPFHLSLILFTQGFTKFLIWSKIVDVLETLSMGFNQGKMDHLVNATSLQVQEH
LSETIRNFFEMFPPKIPSTWDTVNDALANVTRIPDAFWNELAVYYQTDDVRAFGVTDIEAAEMFSSILRATMSSM
ANALFATFGMDLEGEVTNKNPRIEDDIQGGGFQGQVQDKTWDRYRLVVS*
Coding >Hirsu2|3727
ATGGAGTACCAAGAACCCGGCGTGCCGCCGCCCAGCAAGCTGCGCTTCTTCAAGAGCCCGGTAGTCCACGGCGAC
GACGACCGCCGCCGGATCGACAAGCTGGGCGAATTCACCGATCGGGACAGCGAGGATGGCGCCGAGATGCCACGG
TTTGTGCGCCGCGAGGAGCCGACCCTGCTCGAGGTCTTCTTCGACCTGTTCTTTGCCGCCAACTACAACGTCTTC
TCCGACAACCAGGAGGTCACCAGCAATGCGAGATTCAAGGCTTATATCGGCTACTTTTACCTCTTATGGCTGACT
TGGCTCCTCGTGACGCTATTCGACGTCCGCTATGTCACCGACAGCATCTTCAACCGGATGACGAGGGCCGTCCAG
CTCGGCGTCCTCGTCGGCTTCACCGTCGTCGCTCCAAAATTCAACCCCACGAACCAGCATCTCGAAACGATGCAG
TCAGTTTCCCTTATCCTCATGGTCTCGCGCTTGTGCCTGGCGCTCGACTACGGGGCCACACTGTGGCATGTCAGG
AAGGTCCCCAAAGCCCGCATCGCCCTTTACCTGCAGATCTCGGTTCATCTGGTCGCGGCCGTCATCTACTTCGGC
ATCACCTTCGGTTTCAAGAGGGAAGCCAGGAGCCAGATCTTCGTGGCCTGGTACTTCGTCTCGGGCGTCGAAGCC
ATCCTCACCATTTTCCTCTCCAACCTCTACACCGTCCTGAGCTTCACCATGACACACCTCATCAAGCGCATGACG
CTGCTCACCGTCATCATCATCGGCGACGGCATCATTCAAGTGGCGAGAGAGGTGGCCACCATCGTTAAGAACCCC
GACGCCTGGGACGGGGTCACCATCGGGCTCGTGACATCGGCCGTGGCGACCATCTACTTCGTCTTCCTCGTCTAC
TTCGACTGGCTGAGGTCGTCTTTTCATCTGCCTCCTCTCCGACAGCAGCTCTGGATCAGCACCCACCTGCCCTTC
CACCTCTCGCTCATTCTCTTTACCCAGGGCTTCACCAAGTTTCTCATCTGGTCCAAGATCGTAGACGTGCTGGAA
ACGCTGAGCATGGGCTTCAACCAAGGCAAGATGGACCACCTGGTCAACGCGACGAGCCTGCAGGTCCAAGAGCAT
CTGAGCGAAACGATCCGCAACTTCTTCGAAATGTTCCCTCCAAAGATCCCGAGCACTTGGGACACGGTCAACGAC
GCGCTCGCCAACGTCACCCGGATTCCCGACGCCTTCTGGAACGAGCTCGCCGTATACTACCAGACGGATGACGTG
CGCGCCTTCGGCGTCACCGACATCGAAGCAGCCGAGATGTTCTCCAGCATCTTGCGGGCTACCATGTCCTCCATG
GCGAATGCGCTGTTCGCCACGTTCGGCATGGACCTGGAAGGCGAGGTGACGAATAAGAACCCCCGCATCGAGGAT
GATATCCAGGGAGGCGGCTTCCAGGGCCAGGTCCAAGACAAGACGTGGGACCGTTATCGACTGGTGGTGAGTTAA
Transcript >Hirsu2|3727
ATGGAGTACCAAGAACCCGGCGTGCCGCCGCCCAGCAAGCTGCGCTTCTTCAAGAGCCCGGTAGTCCACGGCGAC
GACGACCGCCGCCGGATCGACAAGCTGGGCGAATTCACCGATCGGGACAGCGAGGATGGCGCCGAGATGCCACGG
TTTGTGCGCCGCGAGGAGCCGACCCTGCTCGAGGTCTTCTTCGACCTGTTCTTTGCCGCCAACTACAACGTCTTC
TCCGACAACCAGGAGGTCACCAGCAATGCGAGATTCAAGGCTTATATCGGCTACTTTTACCTCTTATGGCTGACT
TGGCTCCTCGTGACGCTATTCGACGTCCGCTATGTCACCGACAGCATCTTCAACCGGATGACGAGGGCCGTCCAG
CTCGGCGTCCTCGTCGGCTTCACCGTCGTCGCTCCAAAATTCAACCCCACGAACCAGCATCTCGAAACGATGCAG
TCAGTTTCCCTTATCCTCATGGTCTCGCGCTTGTGCCTGGCGCTCGACTACGGGGCCACACTGTGGCATGTCAGG
AAGGTCCCCAAAGCCCGCATCGCCCTTTACCTGCAGATCTCGGTTCATCTGGTCGCGGCCGTCATCTACTTCGGC
ATCACCTTCGGTTTCAAGAGGGAAGCCAGGAGCCAGATCTTCGTGGCCTGGTACTTCGTCTCGGGCGTCGAAGCC
ATCCTCACCATTTTCCTCTCCAACCTCTACACCGTCCTGAGCTTCACCATGACACACCTCATCAAGCGCATGACG
CTGCTCACCGTCATCATCATCGGCGACGGCATCATTCAAGTGGCGAGAGAGGTGGCCACCATCGTTAAGAACCCC
GACGCCTGGGACGGGGTCACCATCGGGCTCGTGACATCGGCCGTGGCGACCATCTACTTCGTCTTCCTCGTCTAC
TTCGACTGGCTGAGGTCGTCTTTTCATCTGCCTCCTCTCCGACAGCAGCTCTGGATCAGCACCCACCTGCCCTTC
CACCTCTCGCTCATTCTCTTTACCCAGGGCTTCACCAAGTTTCTCATCTGGTCCAAGATCGTAGACGTGCTGGAA
ACGCTGAGCATGGGCTTCAACCAAGGCAAGATGGACCACCTGGTCAACGCGACGAGCCTGCAGGTCCAAGAGCAT
CTGAGCGAAACGATCCGCAACTTCTTCGAAATGTTCCCTCCAAAGATCCCGAGCACTTGGGACACGGTCAACGAC
GCGCTCGCCAACGTCACCCGGATTCCCGACGCCTTCTGGAACGAGCTCGCCGTATACTACCAGACGGATGACGTG
CGCGCCTTCGGCGTCACCGACATCGAAGCAGCCGAGATGTTCTCCAGCATCTTGCGGGCTACCATGTCCTCCATG
GCGAATGCGCTGTTCGCCACGTTCGGCATGGACCTGGAAGGCGAGGTGACGAATAAGAACCCCCGCATCGAGGAT
GATATCCAGGGAGGCGGCTTCCAGGGCCAGGTCCAAGACAAGACGTGGGACCGTTATCGACTGGTGGTGAGTTAA
Gene >Hirsu2|3727
ATGGAGTACCAAGAACCCGGCGTGCCGCCGCCCAGCAAGCTGCGCTTCTTCAAGAGCCCGGTAGTCCACGGCGAC
GACGACCGCCGCCGGATCGACAAGCTGGGCGAATTCACCGATCGGGACAGCGAGGATGGCGCCGAGATGCCACGG
TTTGTGCGCGTGCGTCGCTCCGCCTGGCACAGCTGTTGGGGTTCCAAGGTGCTGACGAGAGGCCGGCAGCGCGAG
GAGCCGACCCTGCTCGAGGTCTTCTTCGACCTGTTCTTTGCCGCCAACTACAACGTCTTCTCCGACAACCAGGAG
GTCACCAGCAATGCGAGATTCAAGGCTTATATCGGCTACTTTTAGTGAGCGGACCCGTCCTTCGCCGCTCGTCCT
CCGTCTGCCGTTCTCTTCCAGTCGTGCGCGTGCTTACAACTTGCTCCGCCTGCCCACAGCCTCTTATGGCTGACT
TGGCTCCTCGTGACGCTATTCGACGTCCGCTATGTCACCGACAGCATCTTCAGTGAGGCGCCCGTCGACGGAAGC
TGGAGGGACCGATCGGCTGACCGGCGACGCAGACCGGATGACGAGGGCCGTCCAGCTCGGCGTCCTCGTCGGCTT
CACCGTCGTCGCTCCAAAATTCAACCCCACGAACCAGCATCTCGAAACGATGCAGTCAGTTTGTGCGTCCTCCAC
CCATCTCACGTCTCCCCTCGCGACAAGAGGACCACGAGTCGGCCTCGACTAGACTGGACTGACTCGAGGCCCTCC
CAGCCCTTATCCTCATGGTCTCGCGCTTGTGCCTGGCGCTCGACTACGGGGCCACACTGTGGCATGTCAGGAAGG
TCCCCAAAGCCCGCATCGCCCTTTACCTGCAGATCTCGGTTCATCTGGTCGCGGCCGTCATCTACTTCGGCATCA
CCTTCGGTTTCAAGAGGGAAGCCAGGAGCCAGATCTTCGTGGCCTGGTACTTCGTCTCGGGCGTCGAAGCCATCC
TCACCATTTTCCTCTCCAACCTCTACACCGTCCTGAGCTTCACCATGACACACCTCATCAAGCGCATGACGCTGC
TCACCGTCATCATCATCGGCGACGGCATCATTCAAGTGGCGAGAGAGGTGGCCACCATCGTTAAGAACCCCGACG
CCTGGGGTCAGTATATATGCAGCACCCCCCATAACAGGCCGGCAATCTGCTAACCAGTCTCCAGACGGGGTCACC
ATCGGGCTCGTGACATCGGCCGTGGCGACCATCTACTTCGTCTTCCTCGTCTACTTCGACTGGCTGAGGTCGTCT
TTTCATCTGCCTCCTCTCCGACAGCAGCTCTGGATCAGCACCCACCTGCCCTTCCACCTCTCGCTCATTCTCTTT
ACCCAGGGCTTCACCAAGTTTCTCATCTGGTCCAAGATCGTAGACGTGCTGGAAACGCTGAGCATGGGCTTCAAC
CAAGGCAAGATGGACCACCTGGTCAACGCGACGAGCCTGCAGGTCCAAGAGCATCTGAGCGAAACGATCCGCAAC
TTCTTCGAAATGTTCCCTCCAAAGATCCCGAGCACTTGGGACACGGTCAACGACGCGCTCGCCAACGTCACCCGG
ATTCCCGACGCCTTCTGGAACGAGCTCGCCGTATACTACCAGACGGATGACGTGCGCGCCTTCGGCGTCACCGAC
ATCGAAGCAGCCGAGATGTTCTCCAGCATCTTGCGGGCTACCATGTCCTCCATGGCGAATGCGCTGTTCGCCACG
TTCGGCATGGACCTGGAAGGCGAGGTGACGAATAAGAACCCCCGCATCGAGGATGATATCCAGGGAGGCGGCTTC
CAGGGCCAGGTCCAAGACAAGACGTGGGACCGTTATCGACTGGTGGTGAGTTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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