Protein ID | Hirsu2|3725 |
Gene name | |
Location | Contig_2:60747..61671 |
Strand | - |
Gene length (bp) | 924 |
Transcript length (bp) | 828 |
Coding sequence length (bp) | 828 |
Protein length (aa) | 276 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 4.5E-47 | 46 | 254 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 47 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 37 | 56 | 19 |
2 | 66 | 88 | 22 |
3 | 123 | 145 | 22 |
4 | 155 | 177 | 22 |
5 | 215 | 232 | 17 |
6 | 237 | 259 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3725 MSNSNGYTERAPLLGPKPASSSKALLARWRRRMTAEVSRSWADLVLLLCYVVTGLLDSASTQVWGAFVSMQTGNT VYVGLGLASLVFPPTTPRLYRSGVSLLSFCVGSFLFARFHRFFSPKRRWVLCASFAAQAALTVAAAVIVANAPPA SQDAVDWTVLLPLALVAFQSCAQAVTSRALRHNALTSVVLTSIYCDLFSDHDLFALRNVERNRRATAPLLLLVGA VGGGLLSHSSFGISGALWTAAGLKFCMVVAWFFWPAEPEEDDQAGERAGR* |
Coding | >Hirsu2|3725 ATGAGCAACTCCAACGGCTACACCGAACGCGCGCCTCTGCTCGGCCCCAAGCCCGCGTCGTCGTCCAAGGCGCTG CTGGCCCGATGGCGCCGCCGGATGACGGCTGAGGTGTCGCGCTCCTGGGCCGATCTTGTCTTGCTGCTCTGCTAC GTCGTCACTGGCCTGCTGGACAGCGCGTCGACGCAGGTCTGGGGCGCCTTCGTCTCCATGCAAACAGGAAACACC GTCTATGTCGGCCTCGGCCTCGCCTCTCTCGTCTTCCCGCCCACGACGCCCCGCCTGTACCGCTCCGGCGTCTCG CTGCTCTCCTTCTGCGTCGGCTCCTTTCTCTTCGCCCGCTTCCACCGCTTCTTCTCCCCCAAGCGCCGCTGGGTC CTGTGTGCCTCCTTCGCCGCGCAGGCGGCCCTGACCGTCGCCGCCGCCGTCATCGTAGCCAACGCGCCGCCCGCC TCCCAGGACGCCGTCGACTGGACCGTCCTGCTGCCCCTCGCCCTCGTCGCCTTCCAGAGCTGCGCCCAGGCGGTG ACGAGCAGGGCCCTCCGGCACAACGCGCTGACCAGCGTCGTCCTCACCAGCATCTACTGCGACCTGTTCTCCGAC CACGACCTCTTTGCCCTCCGCAACGTCGAGAGGAACCGCCGCGCCACCGCGCCGCTGCTACTGCTCGTCGGCGCC GTCGGCGGCGGGCTCCTGTCGCATAGCTCGTTCGGCATCAGCGGTGCGCTGTGGACCGCCGCCGGCCTCAAGTTC TGCATGGTCGTCGCCTGGTTCTTCTGGCCCGCAGAACCCGAGGAAGACGACCAGGCTGGCGAGAGGGCAGGGAGA TGA |
Transcript | >Hirsu2|3725 ATGAGCAACTCCAACGGCTACACCGAACGCGCGCCTCTGCTCGGCCCCAAGCCCGCGTCGTCGTCCAAGGCGCTG CTGGCCCGATGGCGCCGCCGGATGACGGCTGAGGTGTCGCGCTCCTGGGCCGATCTTGTCTTGCTGCTCTGCTAC GTCGTCACTGGCCTGCTGGACAGCGCGTCGACGCAGGTCTGGGGCGCCTTCGTCTCCATGCAAACAGGAAACACC GTCTATGTCGGCCTCGGCCTCGCCTCTCTCGTCTTCCCGCCCACGACGCCCCGCCTGTACCGCTCCGGCGTCTCG CTGCTCTCCTTCTGCGTCGGCTCCTTTCTCTTCGCCCGCTTCCACCGCTTCTTCTCCCCCAAGCGCCGCTGGGTC CTGTGTGCCTCCTTCGCCGCGCAGGCGGCCCTGACCGTCGCCGCCGCCGTCATCGTAGCCAACGCGCCGCCCGCC TCCCAGGACGCCGTCGACTGGACCGTCCTGCTGCCCCTCGCCCTCGTCGCCTTCCAGAGCTGCGCCCAGGCGGTG ACGAGCAGGGCCCTCCGGCACAACGCGCTGACCAGCGTCGTCCTCACCAGCATCTACTGCGACCTGTTCTCCGAC CACGACCTCTTTGCCCTCCGCAACGTCGAGAGGAACCGCCGCGCCACCGCGCCGCTGCTACTGCTCGTCGGCGCC GTCGGCGGCGGGCTCCTGTCGCATAGCTCGTTCGGCATCAGCGGTGCGCTGTGGACCGCCGCCGGCCTCAAGTTC TGCATGGTCGTCGCCTGGTTCTTCTGGCCCGCAGAACCCGAGGAAGACGACCAGGCTGGCGAGAGGGCAGGGAGA TGA |
Gene | >Hirsu2|3725 ATGAGCAACTCCAACGGCTACACCGAACGCGCGCCTCTGCTCGGCCCCAAGCCCGCGTCGTCGTCCAAGGCGCTG CTGGCCCGATGGCGCCGCCGGATGACGGCTGAGGTGTCGCGCTCCTGGGCCGATCTTGTCTTGCTGCTCTGCTAC GTCGTCACTGGCCTGCTGGACAGCGCGTCGACGCAGGTCTGGGGCGCCTTCGTCTCCATGCAAACAGGTCCGATC ACCCCTCTCCGCGTGTTACACAGCCGAGATGACGTCCGGCCCCCTTGCAGGCCTCGGCTCGCTCTGACTGTTGCT GGACGAATCACAGGAAACACCGTCTATGTCGGCCTCGGCCTCGCCTCTCTCGTCTTCCCGCCCACGACGCCCCGC CTGTACCGCTCCGGCGTCTCGCTGCTCTCCTTCTGCGTCGGCTCCTTTCTCTTCGCCCGCTTCCACCGCTTCTTC TCCCCCAAGCGCCGCTGGGTCCTGTGTGCCTCCTTCGCCGCGCAGGCGGCCCTGACCGTCGCCGCCGCCGTCATC GTAGCCAACGCGCCGCCCGCCTCCCAGGACGCCGTCGACTGGACCGTCCTGCTGCCCCTCGCCCTCGTCGCCTTC CAGAGCTGCGCCCAGGCGGTGACGAGCAGGGCCCTCCGGCACAACGCGCTGACCAGCGTCGTCCTCACCAGCATC TACTGCGACCTGTTCTCCGACCACGACCTCTTTGCCCTCCGCAACGTCGAGAGGAACCGCCGCGCCACCGCGCCG CTGCTACTGCTCGTCGGCGCCGTCGGCGGCGGGCTCCTGTCGCATAGCTCGTTCGGCATCAGCGGTGCGCTGTGG ACCGCCGCCGGCCTCAAGTTCTGCATGGTCGTCGCCTGGTTCTTCTGGCCCGCAGAACCCGAGGAAGACGACCAG GCTGGCGAGAGGGCAGGGAGATGA |