Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3712
Gene name
LocationContig_2:36405..37064
Strand-
Gene length (bp)659
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 50 72 22
3 77 99 22
4 150 172 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3712
MASPPALGALGLTFTAMRALQAVALITIIGLTSNFISEMVTANYVAPSALVGTLVVACMAAVYTVITYILYWDSL
LPLLVSTAADGLCLIAVIVVACVLGKPVSYLSCPALPDAGNTANFIGSLFLNLSRNNLYEWVDPDKAACLEIKAI
WGLSICLCILFFFSAVASACLWKRIKGSPPPARKDVE*
Coding >Hirsu2|3712
ATGGCGTCTCCTCCTGCGCTCGGGGCCCTGGGCCTGACCTTCACGGCGATGCGGGCGCTGCAGGCCGTTGCCCTC
ATCACCATCATCGGGCTGACGTCCAACTTCATCTCCGAGATGGTGACGGCCAACTACGTGGCCCCGTCCGCCCTG
GTCGGCACGCTGGTCGTGGCATGCATGGCGGCCGTCTACACCGTCATCACCTACATCCTCTACTGGGACTCGCTG
CTGCCCCTGCTCGTGTCGACGGCGGCCGACGGCCTGTGCCTGATCGCCGTCATCGTCGTGGCCTGCGTGCTGGGC
AAGCCCGTCAGCTACCTGTCGTGCCCGGCGCTGCCGGACGCGGGCAACACGGCCAACTTCATCGGCTCGCTCTTC
CTCAACCTGTCGCGCAACAACCTGTATGAATGGGTCGACCCCGATAAGGCAGCCTGCCTGGAGATCAAGGCCATC
TGGGGCCTGAGCATCTGCCTCTGCATCCTCTTCTTCTTCTCCGCCGTCGCCTCGGCTTGCCTGTGGAAGCGCATC
AAGGGATCCCCGCCGCCCGCCCGCAAGGACGTCGAGTGA
Transcript >Hirsu2|3712
ATGGCGTCTCCTCCTGCGCTCGGGGCCCTGGGCCTGACCTTCACGGCGATGCGGGCGCTGCAGGCCGTTGCCCTC
ATCACCATCATCGGGCTGACGTCCAACTTCATCTCCGAGATGGTGACGGCCAACTACGTGGCCCCGTCCGCCCTG
GTCGGCACGCTGGTCGTGGCATGCATGGCGGCCGTCTACACCGTCATCACCTACATCCTCTACTGGGACTCGCTG
CTGCCCCTGCTCGTGTCGACGGCGGCCGACGGCCTGTGCCTGATCGCCGTCATCGTCGTGGCCTGCGTGCTGGGC
AAGCCCGTCAGCTACCTGTCGTGCCCGGCGCTGCCGGACGCGGGCAACACGGCCAACTTCATCGGCTCGCTCTTC
CTCAACCTGTCGCGCAACAACCTGTATGAATGGGTCGACCCCGATAAGGCAGCCTGCCTGGAGATCAAGGCCATC
TGGGGCCTGAGCATCTGCCTCTGCATCCTCTTCTTCTTCTCCGCCGTCGCCTCGGCTTGCCTGTGGAAGCGCATC
AAGGGATCCCCGCCGCCCGCCCGCAAGGACGTCGAGTGA
Gene >Hirsu2|3712
ATGGCGTCTCCTCCTGCGCTCGGGGCCCTGGGCCTGACCTTCACGGCGATGCGGGCGCTGCAGGCCGTTGCCCTC
ATCACCATCATCGGGCTGACGTCCAACTTCATCTCCGAGATGGTGACGGCCAACTACGTGGCCCCGTCCGCCCTG
GTCGGCACGCTGGTCGTGGTATGTCGTCTTCTTCCCCTCCTGAGTGTGGCCGTATTGTCGGCCGTGAGGGAAGAT
GTAATGAGTGAAATAAGCTGACGATGAGAGGGGGCTAGGCATGCATGGCGGCCGTCTACACCGTCATCACCTACA
TCCTCTACTGGGACTCGCTGCTGCCCCTGCTCGTGTCGACGGCGGCCGACGGCCTGTGCCTGATCGCCGTCATCG
TCGTGGCCTGCGTGCTGGGCAAGCCCGTCAGCTACCTGTCGTGCCCGGCGCTGCCGGACGCGGGCAACACGGCCA
ACTTCATCGGCTCGCTCTTCCTCAACCTGTCGCGCAACAACCTGTATGAATGGGTCGACCCCGATAAGGCAGCCT
GCCTGGAGATCAAGGCCATCTGGGGCCTGAGCATCTGCCTCTGCATCCTCTTCTTCTTCTCCGCCGTCGCCTCGG
CTTGCCTGTGGAAGCGCATCAAGGGATCCCCGCCGCCCGCCCGCAAGGACGTCGAGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail