© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|371 |
| Gene name | |
| Location | Contig_1070:91..2093 |
| Strand | - |
| Gene length (bp) | 2002 |
| Transcript length (bp) | 1926 |
| Coding sequence length (bp) | 1926 |
| Protein length (aa) | 642 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08733 | PalH | PalH/RIM21 | 4.6E-114 | 18 | 390 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7RY98|PALH_NEUCR | pH-response regulator protein palH/prr-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-4 PE=3 SV=1 | 18 | 519 | 1.0E-180 |
| sp|Q52E66|PALH_MAGO7 | pH-response regulator protein palH/RIM21 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM21 PE=3 SV=1 | 17 | 513 | 7.0E-160 |
| sp|Q5V9L7|PALH_BOTFB | pH-response regulator protein palH/RIM21 OS=Botryotinia fuckeliana (strain B05.10) GN=palH PE=3 SV=2 | 12 | 563 | 1.0E-142 |
| sp|Q9P904|PALH_EMENI | pH-response regulator protein palH/RIM21 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palH PE=3 SV=1 | 8 | 523 | 6.0E-133 |
| sp|Q9UVF6|PALH_YARLI | pH-response regulator protein palH/RIM21 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM21 PE=3 SV=2 | 84 | 387 | 4.0E-43 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7RY98|PALH_NEUCR | pH-response regulator protein palH/prr-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-4 PE=3 SV=1 | 18 | 519 | 1.0E-180 |
| sp|Q52E66|PALH_MAGO7 | pH-response regulator protein palH/RIM21 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM21 PE=3 SV=1 | 17 | 513 | 7.0E-160 |
| sp|Q5V9L7|PALH_BOTFB | pH-response regulator protein palH/RIM21 OS=Botryotinia fuckeliana (strain B05.10) GN=palH PE=3 SV=2 | 12 | 563 | 1.0E-142 |
| sp|Q9P904|PALH_EMENI | pH-response regulator protein palH/RIM21 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palH PE=3 SV=1 | 8 | 523 | 6.0E-133 |
| sp|Q9UVF6|PALH_YARLI | pH-response regulator protein palH/RIM21 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM21 PE=3 SV=2 | 84 | 387 | 4.0E-43 |
| sp|Q6BPR6|PALH_DEBHA | pH-response regulator protein palH/RIM21 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RIM21 PE=3 SV=2 | 18 | 392 | 1.0E-16 |
| sp|Q6CXK7|PALH_KLULA | pH-response regulator protein palH/RIM21 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RIM21 PE=3 SV=1 | 27 | 384 | 6.0E-15 |
| sp|P48565|PALH_YEAST | pH-response regulator protein palH/RIM21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM21 PE=1 SV=1 | 144 | 384 | 6.0E-12 |
| sp|Q758G4|PALH_ASHGO | pH-response regulator protein palH/RIM21 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RIM21 PE=3 SV=1 | 89 | 460 | 6.0E-11 |
| sp|Q59YK4|PALH_CANAL | pH-response regulator protein palH/RIM21 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIM21 PE=3 SV=1 | 18 | 429 | 8.0E-11 |
| sp|Q6FJT9|PALH_CANGA | pH-response regulator protein palH/RIM21 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RIM21 PE=3 SV=1 | 173 | 384 | 2.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 91 | 113 | 22 |
| 2 | 228 | 250 | 22 |
| 3 | 270 | 292 | 22 |
| 4 | 305 | 327 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|371 METLTLASTTITAAPTLCTTTLLPAHGLLTMSNAPSSVVLASAVVYQVPCPTAKPVSALAVISAEDAAGAKADPR DSSSDTRFSDFRDPFYASTFPICYALAATTVTAYMLLIMLFITPRSFLDGGVVYLGRRRGFTHSAGGESIGGRPW LQKVAALTVAVSLTIATHDTFKVAQRQYQWGAQNAGVLQIAVMGSMELRVIRLISNTFLWLAQAQTLIRLFPRHR EKVIIKWAAFALITLDLIFSALNSFKDRDRALYPNAMGGSFDHPVPALSYLFQLLLGVLYAAWVIYYSLMKKRYA FYHPLMKNMPLLAMISLVSILIPVVFFIMDISKPEFTGWGDYVRWVGAAAASVIVWEWVERIEALEREEKKDGIL GREVFDGDETLEVNASEFPWLRHRKHRKDDGAGGADRSSGLEGGGGGGGGAHPRDLCALRANGWHGVSAITGRQR AQARDAHAADEQHTPRIMGDILRPARWPSRPAPAVTPVSRTDTPSAASTVYAVRYQGTSDSNSRTPDPPPPLPHA ADVLRRNGPSRSSWRRGGDRGGDDDYGPAANQALAAAAAPDEDGALSLPRRSTDLEAAVDAASPEPTSPWRTLSL GKNAMSEKEEGEAEARMKATPVTRRNYGKSYDRRRTRRVCR* |
| Coding | >Hirsu2|371 ATGGAGACGTTGACGCTCGCCTCGACCACCATCACGGCGGCGCCCACGCTATGCACGACGACGCTCCTGCCCGCC CACGGGCTCCTGACCATGTCCAACGCCCCGTCGTCGGTCGTTCTCGCCAGCGCCGTCGTCTACCAGGTGCCGTGT CCGACAGCCAAGCCCGTCAGCGCCCTGGCCGTCATCTCCGCCGAGGACGCCGCCGGGGCCAAGGCGGACCCGCGC GACTCGTCGTCCGACACCCGCTTCTCCGACTTCCGTGATCCCTTCTACGCGTCCACCTTCCCCATCTGCTACGCC CTGGCCGCCACCACCGTCACCGCCTACATGCTCCTCATCATGCTCTTCATCACCCCGCGCTCCTTCCTCGACGGC GGCGTCGTCTACCTCGGCCGCCGCCGCGGCTTCACCCACTCCGCCGGCGGCGAGAGCATCGGCGGCCGGCCCTGG CTGCAAAAGGTGGCCGCCCTCACCGTCGCCGTCTCCCTTACCATCGCCACCCACGACACCTTCAAGGTCGCCCAG CGCCAGTACCAATGGGGTGCCCAGAACGCCGGCGTCCTGCAGATTGCCGTCATGGGCAGCATGGAGCTCCGCGTC ATCCGCCTCATCTCCAACACCTTCCTCTGGCTCGCCCAGGCCCAGACGCTGATCCGCCTCTTCCCCCGCCACCGG GAAAAGGTCATCATCAAGTGGGCCGCCTTCGCCCTCATCACCCTCGACCTCATCTTCAGCGCCCTCAACAGCTTC AAGGACCGCGACCGGGCCCTCTACCCCAACGCCATGGGCGGCAGTTTCGACCACCCCGTCCCGGCCCTCAGTTAC CTCTTCCAGCTGCTCCTCGGCGTCCTCTACGCCGCCTGGGTCATCTACTACTCGCTCATGAAGAAGCGCTACGCC TTCTACCATCCGCTCATGAAGAACATGCCGCTCCTCGCCATGATCTCCCTCGTCTCCATCCTCATCCCCGTCGTC TTCTTCATCATGGACATATCCAAGCCCGAGTTCACCGGCTGGGGCGACTACGTGCGCTGGGTCGGCGCCGCCGCC GCCAGCGTCATCGTCTGGGAGTGGGTCGAGCGCATCGAGGCCCTGGAGCGGGAGGAGAAGAAGGACGGCATCCTC GGCAGGGAGGTCTTCGACGGCGACGAAACGCTCGAAGTCAACGCCTCCGAGTTCCCCTGGCTCCGCCACCGCAAA CACCGCAAGGACGACGGCGCCGGTGGTGCCGACCGCTCGAGCGGCCTCGAAGGTGGCGGCGGCGGAGGCGGCGGC GCCCACCCGCGCGACCTCTGCGCGCTCCGCGCAAACGGCTGGCACGGCGTGTCGGCCATCACGGGCCGCCAACGG GCACAGGCGCGCGACGCGCACGCGGCCGACGAGCAGCACACGCCACGCATCATGGGCGACATCCTGCGGCCGGCG CGCTGGCCCTCGCGGCCCGCACCCGCCGTGACGCCCGTCAGCCGAACGGACACGCCCAGCGCGGCCAGCACCGTC TACGCGGTCCGATACCAGGGCACTTCCGACTCCAATTCCAGGACGCCCGACCCCCCGCCGCCTCTGCCCCACGCC GCGGACGTTTTGCGACGAAACGGACCGTCTCGAAGCTCCTGGAGAAGAGGAGGCGACCGCGGCGGCGACGACGAT TACGGACCTGCTGCCAACCAGGCTCTGGCGGCGGCGGCGGCCCCCGACGAAGACGGCGCACTGTCGCTGCCGAGG AGGTCGACCGACCTGGAAGCGGCAGTCGACGCGGCGTCGCCGGAGCCGACGAGTCCATGGCGGACGCTGAGTCTG GGCAAGAACGCCATGTCGGAGAAGGAGGAAGGGGAGGCAGAGGCGCGCATGAAGGCGACGCCGGTGACGCGGAGA AACTACGGGAAAAGCTACGACCGACGGCGGACACGGAGAGTCTGCCGGTGA |
| Transcript | >Hirsu2|371 ATGGAGACGTTGACGCTCGCCTCGACCACCATCACGGCGGCGCCCACGCTATGCACGACGACGCTCCTGCCCGCC CACGGGCTCCTGACCATGTCCAACGCCCCGTCGTCGGTCGTTCTCGCCAGCGCCGTCGTCTACCAGGTGCCGTGT CCGACAGCCAAGCCCGTCAGCGCCCTGGCCGTCATCTCCGCCGAGGACGCCGCCGGGGCCAAGGCGGACCCGCGC GACTCGTCGTCCGACACCCGCTTCTCCGACTTCCGTGATCCCTTCTACGCGTCCACCTTCCCCATCTGCTACGCC CTGGCCGCCACCACCGTCACCGCCTACATGCTCCTCATCATGCTCTTCATCACCCCGCGCTCCTTCCTCGACGGC GGCGTCGTCTACCTCGGCCGCCGCCGCGGCTTCACCCACTCCGCCGGCGGCGAGAGCATCGGCGGCCGGCCCTGG CTGCAAAAGGTGGCCGCCCTCACCGTCGCCGTCTCCCTTACCATCGCCACCCACGACACCTTCAAGGTCGCCCAG CGCCAGTACCAATGGGGTGCCCAGAACGCCGGCGTCCTGCAGATTGCCGTCATGGGCAGCATGGAGCTCCGCGTC ATCCGCCTCATCTCCAACACCTTCCTCTGGCTCGCCCAGGCCCAGACGCTGATCCGCCTCTTCCCCCGCCACCGG GAAAAGGTCATCATCAAGTGGGCCGCCTTCGCCCTCATCACCCTCGACCTCATCTTCAGCGCCCTCAACAGCTTC AAGGACCGCGACCGGGCCCTCTACCCCAACGCCATGGGCGGCAGTTTCGACCACCCCGTCCCGGCCCTCAGTTAC CTCTTCCAGCTGCTCCTCGGCGTCCTCTACGCCGCCTGGGTCATCTACTACTCGCTCATGAAGAAGCGCTACGCC TTCTACCATCCGCTCATGAAGAACATGCCGCTCCTCGCCATGATCTCCCTCGTCTCCATCCTCATCCCCGTCGTC TTCTTCATCATGGACATATCCAAGCCCGAGTTCACCGGCTGGGGCGACTACGTGCGCTGGGTCGGCGCCGCCGCC GCCAGCGTCATCGTCTGGGAGTGGGTCGAGCGCATCGAGGCCCTGGAGCGGGAGGAGAAGAAGGACGGCATCCTC GGCAGGGAGGTCTTCGACGGCGACGAAACGCTCGAAGTCAACGCCTCCGAGTTCCCCTGGCTCCGCCACCGCAAA CACCGCAAGGACGACGGCGCCGGTGGTGCCGACCGCTCGAGCGGCCTCGAAGGTGGCGGCGGCGGAGGCGGCGGC GCCCACCCGCGCGACCTCTGCGCGCTCCGCGCAAACGGCTGGCACGGCGTGTCGGCCATCACGGGCCGCCAACGG GCACAGGCGCGCGACGCGCACGCGGCCGACGAGCAGCACACGCCACGCATCATGGGCGACATCCTGCGGCCGGCG CGCTGGCCCTCGCGGCCCGCACCCGCCGTGACGCCCGTCAGCCGAACGGACACGCCCAGCGCGGCCAGCACCGTC TACGCGGTCCGATACCAGGGCACTTCCGACTCCAATTCCAGGACGCCCGACCCCCCGCCGCCTCTGCCCCACGCC GCGGACGTTTTGCGACGAAACGGACCGTCTCGAAGCTCCTGGAGAAGAGGAGGCGACCGCGGCGGCGACGACGAT TACGGACCTGCTGCCAACCAGGCTCTGGCGGCGGCGGCGGCCCCCGACGAAGACGGCGCACTGTCGCTGCCGAGG AGGTCGACCGACCTGGAAGCGGCAGTCGACGCGGCGTCGCCGGAGCCGACGAGTCCATGGCGGACGCTGAGTCTG GGCAAGAACGCCATGTCGGAGAAGGAGGAAGGGGAGGCAGAGGCGCGCATGAAGGCGACGCCGGTGACGCGGAGA AACTACGGGAAAAGCTACGACCGACGGCGGACACGGAGAGTCTGCCGGTGA |
| Gene | >Hirsu2|371 ATGGAGACGTTGACGCTCGCCTCGACCACCATCACGGCGGCGCCCACGCTATGCACGACGACGCTCCTGCCCGCC CACGGGCTCCTGACCATGTCCAACGCCCCGTCGTCGGTCGTTCTCGCCAGCGCCGTCGTCTACCAGGTGCCGTGT CCGACAGCCAAGCCCGTCAGCGCCCTGGCCGTCATCTCCGCCGAGGACGCCGCCGGGGCCAAGGCGGACCCGCGC GACTCGTCGTCCGACACCCGCTTCTCCGACTTCCGTGATCCCTTCTACGCGTCCACCTTCCCCATCTGCTACGCC CTGGCCGCCACCACCGTCACCGCCTACATGCTCCTCATCATGCTCTTCATCACCCCGCGCTCCTTCCTCGACGGC GGCGTCGTCTACCTCGGCCGCCGCCGCGGCTTCACCCACTCCGCCGGCGGCGAGAGCATCGGCGGCCGGCCCTGG CTGCAAAAGGTGGCCGCCCTCACCGTCGCCGTCTCCCTTACCATCGCCACCCACGACACCTTCAAGGTCGCCCAG CGCCAGTACCAATGGGGTGCCCAGAACGCCGGCGTCCTGCAGATTGCCGTCATGGGCAGCATGGAGCTCCGCGTC ATCCGCCTCATCTCCAACACCTTCCTCTGGCTCGCCCAGGCCCAGACGCTGATCCGCCTCTTCCCCCGCCACCGG GAAAAGGTCATCATCAAGTGGGCCGCCTTCGCCCTCATCACCCTCGACCTCATCTTCAGCGCCCTCAACAGCTTC AAGGACCGCGACCGGGCCCTCTACCCCAACGCCATGGGCGGCAGTTTCGACCACCCCGTCCCGGCCCTCAGTTAC CTCTTCCAGCTGCTCCTCGGCGTCCTCTACGCCGCCTGGGTCATCTACTACTCGCTCATGAAGAAGCGCTACGCC TTCTACCATCCGCTCATGAAGAACATGCCGCTCCTCGCCATGATCTCCCTCGTCTCCATCCTCATCCCCGTCGTC TTCTTCATCATGGACATATCCAAGCCCGAGTTCACCGGCTGGGGCGACTACGTGCGCTGGGTCGGCGCCGCCGCC GCCAGCGTCATCGTCTGGGAGTGGGTCGAGCGCATCGAGGCCCTGGAGCGGGAGGAGAAGAAGGACGGCATCCTC GGCAGGGAGGTCTTCGACGGCGACGAAACGCTCGAAGTCAACGCCTCCGAGTTCCCCTGGCTCCGCCACCGCAAA CACCGCAAGGACGACGGCGCCGGTGGTGCCGACCGCTCGAGCGGCCTCGAAGGTGGCGGCGGCGGAGGCGGCGGC GCCCACCCGCGCGACCTCTGCGCGCTCCGCGCAAACGGCTGGCACGGCGTGTCGGCCATCACGGGCCGCCAACGG GCACAGGCGCGCGACGCGCACGCGGCCGACGAGCAGCACACGCCACGCATCATGGGCGACATCCTGCGGCCGGCG CGCTGGCCCTCGCGGCCCGCACCCGCCGTGACGCCCGTCAGCCGAACGGACACGCCCAGCGCGGCCAGCACCGTC TACGCGGTCCGATACCAGGGCACTTCCGACTCCAATTCCAGGACGCCCGACCCCCCGCCGCCTCTGCCCCACGCC GCGGACGTTTTGCGACGAAACGGACCGTCTCGAAGCTCCTGGAGAAGAGGAGGCGACCGCGGCGGCGACGACGAT TACGGACCTGCTGCCAACCAGGCTCTGGCGGCGGCGGCGGCCCCCGACGAAGACGGCGCACTGTCGCTGCCGAGG AGGTCGACCGACCTGGAAGCGGCAGTCGACGCGGCGTCGCCGGAGCCGACGAGTCCATGGCGGACGCTGAGTCTG GGCAAGAACGCCATGTCGGAGAAGGAGGAAGGGGAGGCAGAGGCGCGCATGAAGGCGACGCCGGTGACGTCGGAG CCGCGGACTCGGGACGAGGCTGGCCGATGGGACATACGTTCAAGACTGGAGCTGTTCGCCGCGAATCAGGCGGAG AAACTACGGGAAAAGCTACGACCGACGGCGGACACGGAGAGTCTGCCGGTGA |