© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|370 |
| Gene name | |
| Location | Contig_107:36560..37862 |
| Strand | + |
| Gene length (bp) | 1302 |
| Transcript length (bp) | 1302 |
| Coding sequence length (bp) | 1302 |
| Protein length (aa) | 434 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.8E-04 | 52 | 200 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0090729 | toxin activity | Yes |
| GO:0005615 | extracellular space | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1631 | 0.0683 | 0.9315 | 0.1384 | 0.0753 | 0.033 | 0.3182 | 0.2529 | 0.2823 | 0.0021 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 24 | 0.983658 |
| Orthofinder run ID | 4 |
| Orthogroup | 5162 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|370 MLTGASLLSASTLAWLMLAGVGQSQSAEVNAEPPEANAEPPEANAGPPPSRLYRGDHWGPEKVKSRGGFNARSRN PPRLKAGTLGDSTAFPPWDPHVHIASYGHWDTPWISTTSNLTVASSYSKKDGFVYDIQATPHIISNAKFQPDLQE YVGLIKIFWGQVHGYWNVSTCRDVKNIETCQYTENPDYDHKFDDAVAGPNLASELSPDLYGGPTDEELEDIKANL VKYVESICYRDYLAEWLGPQAATNDDCTRPDAAGFAGSDAGKADGPEPGSDPANASSTRPQPTDSSKQTSQQQLD DRCDDESGNPAICRKAARQCAARMRADAPQADFFKCIDTMQSCIPDRANRAQCEKIAAKCRETLLERSVSFEDMT SCVCTGEKQGNPGDSTHSRCMCIKEVQGLKTGFNGDFSTEIDECVGRRDKSIQGSDNS* |
| Coding | >Hirsu2|370 ATGTTGACTGGGGCCTCTCTTCTCTCTGCTTCCACACTGGCGTGGCTTATGCTGGCTGGCGTGGGACAATCTCAA TCAGCTGAGGTGAATGCTGAGCCGCCAGAGGCAAACGCTGAGCCGCCCGAGGCAAATGCTGGGCCGCCTCCAAGC AGGCTCTATCGCGGCGATCACTGGGGTCCAGAAAAAGTGAAGTCCCGCGGAGGATTCAACGCGCGATCTCGAAAC CCCCCTAGGTTGAAGGCGGGTACTTTGGGTGATTCAACTGCGTTTCCACCTTGGGACCCTCATGTGCATATTGCC TCCTACGGCCATTGGGATACTCCTTGGATCTCAACAACCTCGAATCTGACAGTTGCAAGCTCTTATTCCAAAAAG GACGGATTTGTTTATGATATCCAGGCCACGCCTCATATTATCTCAAACGCCAAATTCCAGCCCGACTTACAGGAG TACGTTGGCCTCATCAAAATCTTCTGGGGGCAGGTTCACGGCTATTGGAACGTGTCTACCTGCCGGGATGTCAAG AATATCGAGACTTGCCAATATACTGAAAATCCGGACTACGATCATAAATTCGACGATGCCGTGGCCGGCCCCAAT CTGGCTTCGGAATTATCTCCGGATTTGTACGGTGGCCCGACGGATGAAGAACTTGAGGACATCAAGGCCAACCTT GTGAAGTACGTGGAAAGCATCTGCTACCGCGATTACCTCGCAGAATGGCTTGGTCCTCAAGCGGCCACCAACGAC GACTGTACGAGGCCGGACGCTGCGGGTTTTGCTGGGTCGGATGCCGGTAAGGCTGATGGCCCTGAGCCCGGCTCT GATCCTGCGAATGCCAGCTCTACTCGACCGCAGCCCACAGACTCCTCCAAGCAGACCAGCCAGCAGCAGCTCGAC GACCGCTGCGATGACGAATCAGGCAATCCGGCCATCTGCCGCAAGGCCGCCAGGCAGTGCGCCGCCCGCATGCGC GCGGACGCACCCCAGGCCGACTTCTTCAAATGCATTGACACGATGCAGAGCTGCATCCCGGATCGTGCCAATAGA GCCCAGTGCGAGAAGATTGCAGCCAAATGCCGCGAAACGCTCCTGGAAAGGTCTGTCAGCTTCGAGGACATGACA TCCTGCGTGTGCACGGGGGAGAAGCAGGGAAACCCCGGAGACTCCACACATAGCAGGTGCATGTGTATTAAAGAG GTGCAGGGACTCAAAACGGGTTTCAATGGAGACTTCTCAACAGAGATTGACGAGTGTGTAGGGCGTCGAGACAAG TCCATTCAAGGCTCTGATAACAGCTAA |
| Transcript | >Hirsu2|370 ATGTTGACTGGGGCCTCTCTTCTCTCTGCTTCCACACTGGCGTGGCTTATGCTGGCTGGCGTGGGACAATCTCAA TCAGCTGAGGTGAATGCTGAGCCGCCAGAGGCAAACGCTGAGCCGCCCGAGGCAAATGCTGGGCCGCCTCCAAGC AGGCTCTATCGCGGCGATCACTGGGGTCCAGAAAAAGTGAAGTCCCGCGGAGGATTCAACGCGCGATCTCGAAAC CCCCCTAGGTTGAAGGCGGGTACTTTGGGTGATTCAACTGCGTTTCCACCTTGGGACCCTCATGTGCATATTGCC TCCTACGGCCATTGGGATACTCCTTGGATCTCAACAACCTCGAATCTGACAGTTGCAAGCTCTTATTCCAAAAAG GACGGATTTGTTTATGATATCCAGGCCACGCCTCATATTATCTCAAACGCCAAATTCCAGCCCGACTTACAGGAG TACGTTGGCCTCATCAAAATCTTCTGGGGGCAGGTTCACGGCTATTGGAACGTGTCTACCTGCCGGGATGTCAAG AATATCGAGACTTGCCAATATACTGAAAATCCGGACTACGATCATAAATTCGACGATGCCGTGGCCGGCCCCAAT CTGGCTTCGGAATTATCTCCGGATTTGTACGGTGGCCCGACGGATGAAGAACTTGAGGACATCAAGGCCAACCTT GTGAAGTACGTGGAAAGCATCTGCTACCGCGATTACCTCGCAGAATGGCTTGGTCCTCAAGCGGCCACCAACGAC GACTGTACGAGGCCGGACGCTGCGGGTTTTGCTGGGTCGGATGCCGGTAAGGCTGATGGCCCTGAGCCCGGCTCT GATCCTGCGAATGCCAGCTCTACTCGACCGCAGCCCACAGACTCCTCCAAGCAGACCAGCCAGCAGCAGCTCGAC GACCGCTGCGATGACGAATCAGGCAATCCGGCCATCTGCCGCAAGGCCGCCAGGCAGTGCGCCGCCCGCATGCGC GCGGACGCACCCCAGGCCGACTTCTTCAAATGCATTGACACGATGCAGAGCTGCATCCCGGATCGTGCCAATAGA GCCCAGTGCGAGAAGATTGCAGCCAAATGCCGCGAAACGCTCCTGGAAAGGTCTGTCAGCTTCGAGGACATGACA TCCTGCGTGTGCACGGGGGAGAAGCAGGGAAACCCCGGAGACTCCACACATAGCAGGTGCATGTGTATTAAAGAG GTGCAGGGACTCAAAACGGGTTTCAATGGAGACTTCTCAACAGAGATTGACGAGTGTGTAGGGCGTCGAGACAAG TCCATTCAAGGCTCTGATAACAGCTAA |
| Gene | >Hirsu2|370 ATGTTGACTGGGGCCTCTCTTCTCTCTGCTTCCACACTGGCGTGGCTTATGCTGGCTGGCGTGGGACAATCTCAA TCAGCTGAGGTGAATGCTGAGCCGCCAGAGGCAAACGCTGAGCCGCCCGAGGCAAATGCTGGGCCGCCTCCAAGC AGGCTCTATCGCGGCGATCACTGGGGTCCAGAAAAAGTGAAGTCCCGCGGAGGATTCAACGCGCGATCTCGAAAC CCCCCTAGGTTGAAGGCGGGTACTTTGGGTGATTCAACTGCGTTTCCACCTTGGGACCCTCATGTGCATATTGCC TCCTACGGCCATTGGGATACTCCTTGGATCTCAACAACCTCGAATCTGACAGTTGCAAGCTCTTATTCCAAAAAG GACGGATTTGTTTATGATATCCAGGCCACGCCTCATATTATCTCAAACGCCAAATTCCAGCCCGACTTACAGGAG TACGTTGGCCTCATCAAAATCTTCTGGGGGCAGGTTCACGGCTATTGGAACGTGTCTACCTGCCGGGATGTCAAG AATATCGAGACTTGCCAATATACTGAAAATCCGGACTACGATCATAAATTCGACGATGCCGTGGCCGGCCCCAAT CTGGCTTCGGAATTATCTCCGGATTTGTACGGTGGCCCGACGGATGAAGAACTTGAGGACATCAAGGCCAACCTT GTGAAGTACGTGGAAAGCATCTGCTACCGCGATTACCTCGCAGAATGGCTTGGTCCTCAAGCGGCCACCAACGAC GACTGTACGAGGCCGGACGCTGCGGGTTTTGCTGGGTCGGATGCCGGTAAGGCTGATGGCCCTGAGCCCGGCTCT GATCCTGCGAATGCCAGCTCTACTCGACCGCAGCCCACAGACTCCTCCAAGCAGACCAGCCAGCAGCAGCTCGAC GACCGCTGCGATGACGAATCAGGCAATCCGGCCATCTGCCGCAAGGCCGCCAGGCAGTGCGCCGCCCGCATGCGC GCGGACGCACCCCAGGCCGACTTCTTCAAATGCATTGACACGATGCAGAGCTGCATCCCGGATCGTGCCAATAGA GCCCAGTGCGAGAAGATTGCAGCCAAATGCCGCGAAACGCTCCTGGAAAGGTCTGTCAGCTTCGAGGACATGACA TCCTGCGTGTGCACGGGGGAGAAGCAGGGAAACCCCGGAGACTCCACACATAGCAGGTGCATGTGTATTAAAGAG GTGCAGGGACTCAAAACGGGTTTCAATGGAGACTTCTCAACAGAGATTGACGAGTGTGTAGGGCGTCGAGACAAG TCCATTCAAGGCTCTGATAACAGCTAA |