Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3689
Gene name
LocationContig_1995:262..706
Strand-
Gene length (bp)444
Transcript length (bp)444
Coding sequence length (bp)444
Protein length (aa) 148

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 2.6E-06 107 132
PF00646 F-box F-box domain 1.1E-05 107 132

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5492 0.4523 0.1241 0.1872 0.2495 0.116 0.2929 0.1795 0.1746 0.0044

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2522
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|273
Ophiocordyceps australis map64 (Brazil) OphauB2|5367
Ophiocordyceps camponoti-floridani Ophcf2|01334
Ophiocordyceps camponoti-rufipedis Ophun1|6946
Ophiocordyceps kimflemingae Ophio5|1463
Ophiocordyceps subramaniannii Hirsu2|3689 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3689
MMRQDSRAPPPAPYPGQLIMHTGPVVAPAQPMPSSVIVVTVVDPSLPAVGADARVSSRDDDDDDNDEYDYGYSRF
TDDIAAAVAAAAAPPPDDGCRRCRPPRPPPLERLPNEVLLHILGFLDVDDLLSASRVRVACPVGPPACLPAR*
Coding >Hirsu2|3689
ATGATGCGCCAGGATTCTCGTGCCCCGCCGCCGGCTCCGTATCCCGGCCAGCTCATCATGCACACGGGCCCCGTG
GTCGCGCCGGCTCAGCCGATGCCGTCGTCGGTCATCGTCGTCACCGTAGTCGACCCAAGCCTGCCGGCCGTCGGC
GCCGATGCCAGGGTCTCGTCCCGCGACGACGACGACGACGACAACGACGAATACGATTACGGCTACAGCCGCTTC
ACCGACGATATAGCGGCGGCCGTGGCGGCGGCGGCAGCCCCGCCGCCCGACGACGGCTGCAGGCGATGCCGTCCG
CCGCGCCCTCCACCGCTGGAACGGCTGCCGAACGAGGTCTTGCTCCACATCCTCGGCTTCCTGGACGTCGACGAC
CTGCTGTCTGCCTCCCGGGTACGTGTTGCCTGCCCCGTCGGCCCGCCCGCCTGCCTTCCTGCCCGCTGA
Transcript >Hirsu2|3689
ATGATGCGCCAGGATTCTCGTGCCCCGCCGCCGGCTCCGTATCCCGGCCAGCTCATCATGCACACGGGCCCCGTG
GTCGCGCCGGCTCAGCCGATGCCGTCGTCGGTCATCGTCGTCACCGTAGTCGACCCAAGCCTGCCGGCCGTCGGC
GCCGATGCCAGGGTCTCGTCCCGCGACGACGACGACGACGACAACGACGAATACGATTACGGCTACAGCCGCTTC
ACCGACGATATAGCGGCGGCCGTGGCGGCGGCGGCAGCCCCGCCGCCCGACGACGGCTGCAGGCGATGCCGTCCG
CCGCGCCCTCCACCGCTGGAACGGCTGCCGAACGAGGTCTTGCTCCACATCCTCGGCTTCCTGGACGTCGACGAC
CTGCTGTCTGCCTCCCGGGTACGTGTTGCCTGCCCCGTCGGCCCGCCCGCCTGCCTTCCTGCCCGCTGA
Gene >Hirsu2|3689
ATGATGCGCCAGGATTCTCGTGCCCCGCCGCCGGCTCCGTATCCCGGCCAGCTCATCATGCACACGGGCCCCGTG
GTCGCGCCGGCTCAGCCGATGCCGTCGTCGGTCATCGTCGTCACCGTAGTCGACCCAAGCCTGCCGGCCGTCGGC
GCCGATGCCAGGGTCTCGTCCCGCGACGACGACGACGACGACAACGACGAATACGATTACGGCTACAGCCGCTTC
ACCGACGATATAGCGGCGGCCGTGGCGGCGGCGGCAGCCCCGCCGCCCGACGACGGCTGCAGGCGATGCCGTCCG
CCGCGCCCTCCACCGCTGGAACGGCTGCCGAACGAGGTCTTGCTCCACATCCTCGGCTTCCTGGACGTCGACGAC
CTGCTGTCTGCCTCCCGGGTACGTGTTGCCTGCCCCGTCGGCCCGCCCGCCTGCCTTCCTGCCCGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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