Fungal Genomics

General Properties

Protein ID	Hirsu2|3686
Gene name
Location	Contig_1993:870..1681
Strand	-
Gene length (bp)	811
Transcript length (bp)	558
Coding sequence length (bp)	558
Protein length (aa)	186

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04000	Sas10_Utp3	Sas10/Utp3/C1D family	2.6E-13	11	88

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|O74469|YQC7_SCHPO	Exosome complex protein C1739.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1739.07 PE=1 SV=1	11	104	1.0E-12
sp|Q7TSU0|C1D_CRIGR	Nuclear nucleic acid-binding protein C1D OS=Cricetulus griseus GN=C1D PE=2 SV=1	6	120	3.0E-07
sp|Q5XJ97|C1D_DANRE	Nuclear nucleic acid-binding protein C1D OS=Danio rerio GN=c1d PE=2 SV=1	6	116	4.0E-07
sp|O35473|C1D_MOUSE	Nuclear nucleic acid-binding protein C1D OS=Mus musculus GN=C1d PE=1 SV=1	6	120	5.0E-07
sp|Q3KPR1|C1D_XENLA	Nuclear nucleic acid-binding protein C1D OS=Xenopus laevis GN=c1d PE=2 SV=1	42	118	2.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Nucleus	Nuclear localization signal	0.1668	0.9505	0.1111	0.0111	0.0105	0.0068	0.0308	0.0149	0.0394	0.0009

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	2521
Change Orthofinder run	4: Insect Pathogens

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2|3998
Ophiocordyceps australis map64 (Brazil)	OphauB2|7462
Ophiocordyceps camponoti-floridani	Ophcf2|06246
Ophiocordyceps camponoti-rufipedis	Ophun1|5933
Ophiocordyceps kimflemingae	Ophio5|3268
Ophiocordyceps subramaniannii	Hirsu2|3686 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2|3686 MSDVKDITPDLDRLDSHLDGLEDALAPMLDGLDQTASQLPLLDKAKLFSLSAYAIETLLFSYLRLHGVDAQNHAV FTELKRVQQYFAKIKVAEEPEAKRSTTVNQEAAVRILKADLSDNKTLSRKLAEKIAEERAKALLKSVEAKKRPAD DSTGSGSEEQARGKKKKKEEKRKKKKEKRKSETES*
Coding	>Hirsu2|3686 ATGTCGGACGTCAAGGACATAACGCCCGACCTCGACCGACTGGACTCGCACCTCGACGGCCTGGAAGATGCGCTG GCTCCCATGCTAGACGGCCTGGACCAGACGGCCTCCCAACTTCCTCTGCTTGACAAGGCGAAGCTGTTTTCGCTC TCGGCCTACGCCATCGAGACCCTGCTGTTCTCGTATTTGCGGCTGCACGGCGTCGACGCCCAGAACCATGCCGTC TTCACTGAACTGAAGCGGGTGCAGCAGTACTTCGCCAAGATCAAGGTCGCCGAGGAACCAGAAGCCAAGCGGAGC ACGACGGTGAACCAGGAAGCAGCTGTGCGGATACTGAAAGCCGACCTGTCTGACAACAAGACGCTGAGCCGCAAG CTCGCGGAGAAGATCGCCGAGGAGCGCGCCAAGGCGCTGCTCAAGTCCGTCGAGGCCAAGAAGCGGCCGGCCGAC GACTCAACCGGCTCCGGCAGCGAGGAGCAGGCGCGGGGCAAGAAAAAGAAGAAGGAGGAGAAGAGGAAGAAGAAG AAGGAGAAGCGCAAGTCGGAGACGGAGAGCTAG
Transcript	>Hirsu2|3686 ATGTCGGACGTCAAGGACATAACGCCCGACCTCGACCGACTGGACTCGCACCTCGACGGCCTGGAAGATGCGCTG GCTCCCATGCTAGACGGCCTGGACCAGACGGCCTCCCAACTTCCTCTGCTTGACAAGGCGAAGCTGTTTTCGCTC TCGGCCTACGCCATCGAGACCCTGCTGTTCTCGTATTTGCGGCTGCACGGCGTCGACGCCCAGAACCATGCCGTC TTCACTGAACTGAAGCGGGTGCAGCAGTACTTCGCCAAGATCAAGGTCGCCGAGGAACCAGAAGCCAAGCGGAGC ACGACGGTGAACCAGGAAGCAGCTGTGCGGATACTGAAAGCCGACCTGTCTGACAACAAGACGCTGAGCCGCAAG CTCGCGGAGAAGATCGCCGAGGAGCGCGCCAAGGCGCTGCTCAAGTCCGTCGAGGCCAAGAAGCGGCCGGCCGAC GACTCAACCGGCTCCGGCAGCGAGGAGCAGGCGCGGGGCAAGAAAAAGAAGAAGGAGGAGAAGAGGAAGAAGAAG AAGGAGAAGCGCAAGTCGGAGACGGAGAGCTAG
Gene	>Hirsu2|3686 ATGTCGGACGTCAAGGACATAACGCCCGACCTCGACCGACTGGACTCGCACCTCGACGGCCTGGAAGATGCGCTG GCTCCCATGCTAGACGGCCTGGACCAGACGGCCTCCCAACTTCCTCTGCTTGACAAGGCGAAGCTGTTTTCGCTC TCGGCCTACGCCATCGAGACCCTGCTGTTCTGTGAGTCCGCCCAGGGCTGAGCTGGACCGTCAAACAGATAGGAG GCAGATCGAAGAGGACCCAGCATGCCGATCGGGGACGGGCAAAATGCGTGCATACAGAAGGGAAATGGCTGATGC GAGAAACAGCGTATTTGCGGCTGCACGGCGTCGACGCCCAGAACCATGCCGTCTTCACTGAACTGAAGCGGGTGC AGCAGTACTTCGCCAAGATCAAGGTCGCCGAGGAACCAGAAGCCAAGCGGAGCACGACGGTGAACCAGGAAGCAG CTGTGCGGATACTGAAAGCCGACCTGGTGCGTCCTCGCCGCCCCCTCTCCCCCCGAATCGCGTCTGCCCGTTCTC CGTTCTCTGTCTTCTCTGCGCGATTGGAATCACATTTTTGGCTAACACAGCGCCCTTTTCTTCTCCGTTTGTACA GTCTGACAACAAGACGCTGAGCCGCAAGCTCGCGGAGAAGATCGCCGAGGAGCGCGCCAAGGCGCTGCTCAAGTC CGTCGAGGCCAAGAAGCGGCCGGCCGACGACTCAACCGGCTCCGGCAGCGAGGAGCAGGCGCGGGGCAAGAAAAA GAAGAAGGAGGAGAAGAGGAAGAAGAAGAAGGAGAAGCGCAAGTCGGAGACGGAGAGCTAG