Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3685
Gene name
LocationContig_1992:2690..3684
Strand+
Gene length (bp)994
Transcript length (bp)846
Coding sequence length (bp)846
Protein length (aa) 282

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-25 46 208
PF00270 DEAD DEAD/DEAH box helicase 1.1E-11 51 211

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q1MTR1|IRC3_SCHPO Putative mitochondrial ATP-dependent helicase irc3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=irc3 PE=3 SV=2 47 261 2.0E-56
sp|Q06683|IRC3_YEAST Putative ATP-dependent helicase IRC3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC3 PE=1 SV=1 49 267 6.0E-48
sp|P33919|YEJH_ECOLI Uncharacterized protein YejH OS=Escherichia coli (strain K12) GN=yejH PE=3 SV=2 49 176 1.0E-06
sp|Q47281|T1RE_ECOLX Type I restriction enzyme EcoEI R protein OS=Escherichia coli GN=hsdR PE=3 SV=1 50 238 3.0E-06

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0016787 hydrolase activity Yes
GO:0003676 nucleic acid binding Yes
GO:0005524 ATP binding Yes
GO:0030554 adenyl nucleotide binding No
GO:0032555 purine ribonucleotide binding No
GO:0005488 binding No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0017076 purine nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043167 ion binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:0032553 ribonucleotide binding No
GO:0003674 molecular_function No
GO:0097367 carbohydrate derivative binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.117 0.1336 0.1247 0.0516 0.9021 0.0912 0.0306 0.0473 0.053 0.0187

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2520
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4430
Ophiocordyceps australis map64 (Brazil) OphauB2|1165
Ophiocordyceps camponoti-floridani Ophcf2|04156
Ophiocordyceps camponoti-rufipedis Ophun1|2157
Ophiocordyceps kimflemingae Ophio5|3013
Ophiocordyceps subramaniannii Hirsu2|3685 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3685
MMLRIAARCVFRPGPARSARLFRPLGFRAGAATLVTSPGNNIISTKLQLRDYQQECINSVLSSLKHGHKRVGISL
ATGSGKTVIFTQLIDKIPSRPCGGDRTLILAHRRELVEQAARHCRLAYPDKTIELEMGSVHASGAADITVASVQS
ITSKDRLDKYQSDAFKLVLVDEAHHIVAPGYLRTLQQFGLERKRDRSPVLVGVSATFSRFDGVKLGAAIDEIVYH
KDYVDMISDKWLSDVVFTTVKTSANLSKVRNGAFGDFQTGELRRSSSASTWPTWPA*
Coding >Hirsu2|3685
ATGATGCTACGCATCGCTGCAAGATGCGTCTTCCGTCCAGGCCCTGCCAGGAGCGCGCGGCTCTTCCGTCCGCTT
GGCTTCAGGGCCGGCGCCGCGACGCTCGTCACGTCGCCGGGCAACAACATCATCAGCACCAAGCTTCAGCTGCGC
GACTACCAGCAGGAATGCATCAACTCGGTCCTCTCGTCCCTCAAGCACGGCCACAAGCGCGTCGGCATCTCGCTG
GCCACGGGCAGCGGTAAGACGGTCATCTTCACCCAGCTCATCGACAAGATCCCCTCGCGGCCGTGCGGCGGCGAC
CGCACGCTCATCCTGGCCCACCGGCGCGAGCTGGTGGAACAGGCGGCGCGGCACTGCCGCCTCGCCTACCCGGAC
AAGACGATCGAGCTCGAGATGGGGTCGGTGCACGCGTCGGGGGCGGCCGACATCACCGTCGCCAGCGTCCAGAGC
ATCACGTCCAAGGACCGGCTGGACAAGTACCAGTCGGACGCGTTCAAGCTGGTGCTCGTCGACGAGGCCCACCAC
ATCGTCGCGCCGGGCTACCTCAGGACGCTGCAGCAGTTCGGGCTCGAGCGGAAGCGGGACCGGTCGCCCGTCCTC
GTCGGAGTCTCGGCCACCTTCTCGCGCTTCGACGGCGTCAAGCTGGGCGCGGCCATCGACGAGATCGTCTACCAC
AAGGACTACGTCGACATGATCTCGGACAAGTGGCTGTCGGACGTCGTCTTCACCACGGTCAAGACGTCGGCCAAC
CTGTCCAAGGTCCGCAACGGCGCCTTCGGCGACTTCCAGACGGGCGAGCTTCGACGCTCGTCTTCTGCGTCGACC
TGGCCCACGTGGCCGGCCTGA
Transcript >Hirsu2|3685
ATGATGCTACGCATCGCTGCAAGATGCGTCTTCCGTCCAGGCCCTGCCAGGAGCGCGCGGCTCTTCCGTCCGCTT
GGCTTCAGGGCCGGCGCCGCGACGCTCGTCACGTCGCCGGGCAACAACATCATCAGCACCAAGCTTCAGCTGCGC
GACTACCAGCAGGAATGCATCAACTCGGTCCTCTCGTCCCTCAAGCACGGCCACAAGCGCGTCGGCATCTCGCTG
GCCACGGGCAGCGGTAAGACGGTCATCTTCACCCAGCTCATCGACAAGATCCCCTCGCGGCCGTGCGGCGGCGAC
CGCACGCTCATCCTGGCCCACCGGCGCGAGCTGGTGGAACAGGCGGCGCGGCACTGCCGCCTCGCCTACCCGGAC
AAGACGATCGAGCTCGAGATGGGGTCGGTGCACGCGTCGGGGGCGGCCGACATCACCGTCGCCAGCGTCCAGAGC
ATCACGTCCAAGGACCGGCTGGACAAGTACCAGTCGGACGCGTTCAAGCTGGTGCTCGTCGACGAGGCCCACCAC
ATCGTCGCGCCGGGCTACCTCAGGACGCTGCAGCAGTTCGGGCTCGAGCGGAAGCGGGACCGGTCGCCCGTCCTC
GTCGGAGTCTCGGCCACCTTCTCGCGCTTCGACGGCGTCAAGCTGGGCGCGGCCATCGACGAGATCGTCTACCAC
AAGGACTACGTCGACATGATCTCGGACAAGTGGCTGTCGGACGTCGTCTTCACCACGGTCAAGACGTCGGCCAAC
CTGTCCAAGGTCCGCAACGGCGCCTTCGGCGACTTCCAGACGGGCGAGCTTCGACGCTCGTCTTCTGCGTCGACC
TGGCCCACGTGGCCGGCCTGA
Gene >Hirsu2|3685
ATGATGCTACGCATCGCTGCAAGATGCGTCTTCCGTCCAGGCCCTGCCAGGAGCGCGCGGCTCTTCCGTCCGCTT
GGCTTCAGGGCCGGCGCCGCGACGCTCGTCACGTCGCCGGGCAACAACATCATCAGCACCAAGCTTCAGCTGCGC
GACTACCAGCAGGAATGCATCAACTCGGTCCTCTCGTCCCTCAAGCACGGCCACAAGCGCGTCGGCATCTCGCTG
GCCACGGGCAGCGGTAAGACGGTAAGGCACTGCGCCCCGGCCGAGCGACGAGGACGACTTTGTGGCTGACGCTCG
ATCCTCTCCCGTCGCCAGGTCATCTTCACCCAGCTCATCGACAAGATCCCCTCGCGGCCGTGCGGCGGCGACCGC
ACGCTCATCCTGGCCCACCGGCGCGAGCTGGTGGAACAGGCGGCGCGGCACTGCCGCCTCGCCTACCCGGACAAG
ACGATCGAGCTCGAGATGGGGTCGGTGCACGCGTCGGGGGCGGCCGACATCACCGTCGCCAGCGTCCAGAGCATC
ACGTCCAAGGACCGGCTGGACAAGTACCAGTCGGACGCGTTCAAGCTGGTGCTCGTCGACGAGGCCCACCACATC
GTCGCGCCGGGCTACCTCAGGACGCTGCAGCAGTTCGGGCTCGAGCGGAAGCGGGACCGGTCGCCCGTCCTCGTC
GGAGTCTCGGCCACCTTCTCGCGCTTCGACGGCGTCAAGCTGGGCGCGGCCATCGACGAGATCGTCTACCACAAG
GACTACGTCGACATGATCTCGGACAAGTGGCTGTCGGACGTCGTCTTCACCACGGTCAAGACGTCGGCCAACCTG
TCCAAGGTCCGCAACGGCGCCTTCGGCGACTTCCAGACGGGCGAGCTGTCGCGCGTCGTCAACACGGACGAGGTC
AACGAGACCATCGTCCGCAGCTGGCTGGCCAAGGCCGAGGGCCGCAAGTCGACGCTCGTCTTCTGCGTCGACCTG
GCCCACGTGGCCGGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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