Protein ID | Hirsu2|3684 |
Gene name | |
Location | Contig_1992:531..2211 |
Strand | - |
Gene length (bp) | 1680 |
Transcript length (bp) | 1680 |
Coding sequence length (bp) | 1680 |
Protein length (aa) | 560 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.1497 | 0.9519 | 0.0507 | 0.0045 | 0.0655 | 0.0007 | 0.0235 | 0.0093 | 0.0062 | 0.0507 |
Orthofinder run ID | 4 |
Orthogroup | 2519 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3684 MDPDSDASYNEESSAREDGFASDADVESDEEAHSSPRAPDADHLPSQQGSDDESSLSAYERGRDRKRRRIRDGVA HRPFKRQKGVFSAEYLELLNRDIDDAAYAVCLDDDFGLPSSRPGLIRWSSVEKQQFYEALARLGRHDLPGIAARV GTKSPIEVGHYLDFLAEALRLRRLRDRRSFLELAEYPAAVELSQQCCRAQEEAADALSLRQEHREAQREKKKWGD YWDVTHRVAARLDHGRDADVRQSLAFARMFHLGRWLRLSERLFMNSSIPADNWTSVNDVPPSVWATAFDDFYSLV VSVTRRLVQTTLFVSMSRIRAKRELIPKTRDIVRRRDAEAAIASLGMEPNARRFWPECARRLRLNVYHEPPAEAE EEEEEPLAYDEVEGALGEERDGDCNQQTEVDDEVKQESASDGDDISSGSGEEEEEGEGEEEVPSGDQERQEIRRE ANEILWFSATEMRDVRSARKPLERRIAMERMQEDQARRWDEYASYQAELDLWDLLQREPPTEIPKKQEPGRLETS NLDVESIYPMNGDWAGQLQYRAEWETWRREPPSG* |
Coding | >Hirsu2|3684 ATGGACCCCGACAGCGACGCCTCGTACAATGAGGAGTCTTCGGCTCGGGAGGACGGCTTTGCGTCCGACGCCGAC GTCGAGTCGGACGAGGAGGCGCACTCGTCGCCCCGGGCCCCCGACGCCGACCATCTTCCCTCCCAGCAGGGCTCA GACGACGAGTCCTCGCTGTCGGCCTATGAGCGCGGCCGCGACCGGAAGAGGAGACGCATCCGAGACGGCGTGGCC CACCGGCCCTTCAAGCGCCAGAAGGGCGTCTTCAGCGCCGAATACCTCGAGCTGCTCAACCGAGACATCGACGAC GCTGCCTACGCCGTCTGCCTCGACGACGACTTTGGCCTCCCGAGCTCGCGGCCGGGCCTCATCCGCTGGTCGTCG GTGGAGAAGCAGCAGTTCTACGAGGCCCTCGCCCGTCTCGGCCGCCACGACCTGCCCGGCATCGCCGCCCGCGTC GGCACCAAGAGCCCCATCGAGGTCGGGCACTACCTTGACTTCCTCGCCGAGGCACTCCGTCTCCGCCGCCTCCGG GATCGCCGCTCCTTCCTGGAGCTGGCCGAGTACCCAGCCGCCGTCGAGCTGAGCCAGCAGTGCTGCCGCGCCCAG GAGGAGGCCGCCGACGCCCTCTCGCTCCGCCAGGAGCACCGGGAGGCGCAGCGCGAGAAGAAGAAATGGGGCGAC TACTGGGACGTCACCCACAGGGTGGCCGCCAGGCTTGATCACGGCCGAGACGCCGACGTCCGTCAGTCGCTGGCG TTCGCGCGCATGTTCCATCTCGGCCGTTGGCTCCGCCTCTCGGAACGTCTCTTTATGAACTCGTCCATCCCGGCC GACAACTGGACGTCTGTCAACGACGTACCTCCGTCCGTGTGGGCCACCGCCTTCGATGACTTCTACTCGCTGGTC GTGTCCGTGACCCGGCGCCTTGTCCAGACAACGCTCTTCGTCAGCATGTCGAGAATCAGGGCCAAGAGGGAGCTC ATCCCCAAAACAAGAGACATCGTGAGGAGGAGGGATGCCGAGGCCGCCATCGCCTCCCTGGGCATGGAGCCCAAC GCTCGGCGGTTCTGGCCCGAGTGTGCGAGGAGGCTGCGTCTGAACGTCTACCATGAACCGCCAGCAGAGGCGGAG GAGGAGGAGGAGGAGCCCCTGGCTTACGACGAGGTCGAGGGCGCGCTGGGGGAAGAGCGGGATGGCGACTGCAAC CAGCAGACCGAGGTGGACGACGAGGTCAAGCAGGAGTCGGCCTCGGACGGCGACGACATCTCGAGCGGTTCCGGG GAGGAAGAGGAAGAGGGAGAGGGAGAAGAAGAGGTGCCGTCCGGGGACCAGGAGCGGCAGGAGATCCGCCGCGAG GCCAACGAGATACTGTGGTTTTCCGCCACGGAGATGCGCGACGTGCGGAGCGCTAGGAAGCCGCTCGAGCGGCGC ATCGCCATGGAGCGGATGCAGGAGGACCAGGCCCGGCGCTGGGACGAGTACGCCAGCTACCAGGCCGAGCTCGAC CTCTGGGACCTGCTGCAGAGGGAGCCGCCGACGGAGATACCCAAGAAGCAGGAGCCGGGCAGGCTCGAGACGTCC AACCTCGACGTCGAGAGCATCTACCCCATGAACGGGGACTGGGCCGGCCAGCTGCAGTACCGCGCCGAGTGGGAG ACGTGGCGGCGAGAGCCCCCGTCAGGTTAG |
Transcript | >Hirsu2|3684 ATGGACCCCGACAGCGACGCCTCGTACAATGAGGAGTCTTCGGCTCGGGAGGACGGCTTTGCGTCCGACGCCGAC GTCGAGTCGGACGAGGAGGCGCACTCGTCGCCCCGGGCCCCCGACGCCGACCATCTTCCCTCCCAGCAGGGCTCA GACGACGAGTCCTCGCTGTCGGCCTATGAGCGCGGCCGCGACCGGAAGAGGAGACGCATCCGAGACGGCGTGGCC CACCGGCCCTTCAAGCGCCAGAAGGGCGTCTTCAGCGCCGAATACCTCGAGCTGCTCAACCGAGACATCGACGAC GCTGCCTACGCCGTCTGCCTCGACGACGACTTTGGCCTCCCGAGCTCGCGGCCGGGCCTCATCCGCTGGTCGTCG GTGGAGAAGCAGCAGTTCTACGAGGCCCTCGCCCGTCTCGGCCGCCACGACCTGCCCGGCATCGCCGCCCGCGTC GGCACCAAGAGCCCCATCGAGGTCGGGCACTACCTTGACTTCCTCGCCGAGGCACTCCGTCTCCGCCGCCTCCGG GATCGCCGCTCCTTCCTGGAGCTGGCCGAGTACCCAGCCGCCGTCGAGCTGAGCCAGCAGTGCTGCCGCGCCCAG GAGGAGGCCGCCGACGCCCTCTCGCTCCGCCAGGAGCACCGGGAGGCGCAGCGCGAGAAGAAGAAATGGGGCGAC TACTGGGACGTCACCCACAGGGTGGCCGCCAGGCTTGATCACGGCCGAGACGCCGACGTCCGTCAGTCGCTGGCG TTCGCGCGCATGTTCCATCTCGGCCGTTGGCTCCGCCTCTCGGAACGTCTCTTTATGAACTCGTCCATCCCGGCC GACAACTGGACGTCTGTCAACGACGTACCTCCGTCCGTGTGGGCCACCGCCTTCGATGACTTCTACTCGCTGGTC GTGTCCGTGACCCGGCGCCTTGTCCAGACAACGCTCTTCGTCAGCATGTCGAGAATCAGGGCCAAGAGGGAGCTC ATCCCCAAAACAAGAGACATCGTGAGGAGGAGGGATGCCGAGGCCGCCATCGCCTCCCTGGGCATGGAGCCCAAC GCTCGGCGGTTCTGGCCCGAGTGTGCGAGGAGGCTGCGTCTGAACGTCTACCATGAACCGCCAGCAGAGGCGGAG GAGGAGGAGGAGGAGCCCCTGGCTTACGACGAGGTCGAGGGCGCGCTGGGGGAAGAGCGGGATGGCGACTGCAAC CAGCAGACCGAGGTGGACGACGAGGTCAAGCAGGAGTCGGCCTCGGACGGCGACGACATCTCGAGCGGTTCCGGG GAGGAAGAGGAAGAGGGAGAGGGAGAAGAAGAGGTGCCGTCCGGGGACCAGGAGCGGCAGGAGATCCGCCGCGAG GCCAACGAGATACTGTGGTTTTCCGCCACGGAGATGCGCGACGTGCGGAGCGCTAGGAAGCCGCTCGAGCGGCGC ATCGCCATGGAGCGGATGCAGGAGGACCAGGCCCGGCGCTGGGACGAGTACGCCAGCTACCAGGCCGAGCTCGAC CTCTGGGACCTGCTGCAGAGGGAGCCGCCGACGGAGATACCCAAGAAGCAGGAGCCGGGCAGGCTCGAGACGTCC AACCTCGACGTCGAGAGCATCTACCCCATGAACGGGGACTGGGCCGGCCAGCTGCAGTACCGCGCCGAGTGGGAG ACGTGGCGGCGAGAGCCCCCGTCAGGTTAG |
Gene | >Hirsu2|3684 ATGGACCCCGACAGCGACGCCTCGTACAATGAGGAGTCTTCGGCTCGGGAGGACGGCTTTGCGTCCGACGCCGAC GTCGAGTCGGACGAGGAGGCGCACTCGTCGCCCCGGGCCCCCGACGCCGACCATCTTCCCTCCCAGCAGGGCTCA GACGACGAGTCCTCGCTGTCGGCCTATGAGCGCGGCCGCGACCGGAAGAGGAGACGCATCCGAGACGGCGTGGCC CACCGGCCCTTCAAGCGCCAGAAGGGCGTCTTCAGCGCCGAATACCTCGAGCTGCTCAACCGAGACATCGACGAC GCTGCCTACGCCGTCTGCCTCGACGACGACTTTGGCCTCCCGAGCTCGCGGCCGGGCCTCATCCGCTGGTCGTCG GTGGAGAAGCAGCAGTTCTACGAGGCCCTCGCCCGTCTCGGCCGCCACGACCTGCCCGGCATCGCCGCCCGCGTC GGCACCAAGAGCCCCATCGAGGTCGGGCACTACCTTGACTTCCTCGCCGAGGCACTCCGTCTCCGCCGCCTCCGG GATCGCCGCTCCTTCCTGGAGCTGGCCGAGTACCCAGCCGCCGTCGAGCTGAGCCAGCAGTGCTGCCGCGCCCAG GAGGAGGCCGCCGACGCCCTCTCGCTCCGCCAGGAGCACCGGGAGGCGCAGCGCGAGAAGAAGAAATGGGGCGAC TACTGGGACGTCACCCACAGGGTGGCCGCCAGGCTTGATCACGGCCGAGACGCCGACGTCCGTCAGTCGCTGGCG TTCGCGCGCATGTTCCATCTCGGCCGTTGGCTCCGCCTCTCGGAACGTCTCTTTATGAACTCGTCCATCCCGGCC GACAACTGGACGTCTGTCAACGACGTACCTCCGTCCGTGTGGGCCACCGCCTTCGATGACTTCTACTCGCTGGTC GTGTCCGTGACCCGGCGCCTTGTCCAGACAACGCTCTTCGTCAGCATGTCGAGAATCAGGGCCAAGAGGGAGCTC ATCCCCAAAACAAGAGACATCGTGAGGAGGAGGGATGCCGAGGCCGCCATCGCCTCCCTGGGCATGGAGCCCAAC GCTCGGCGGTTCTGGCCCGAGTGTGCGAGGAGGCTGCGTCTGAACGTCTACCATGAACCGCCAGCAGAGGCGGAG GAGGAGGAGGAGGAGCCCCTGGCTTACGACGAGGTCGAGGGCGCGCTGGGGGAAGAGCGGGATGGCGACTGCAAC CAGCAGACCGAGGTGGACGACGAGGTCAAGCAGGAGTCGGCCTCGGACGGCGACGACATCTCGAGCGGTTCCGGG GAGGAAGAGGAAGAGGGAGAGGGAGAAGAAGAGGTGCCGTCCGGGGACCAGGAGCGGCAGGAGATCCGCCGCGAG GCCAACGAGATACTGTGGTTTTCCGCCACGGAGATGCGCGACGTGCGGAGCGCTAGGAAGCCGCTCGAGCGGCGC ATCGCCATGGAGCGGATGCAGGAGGACCAGGCCCGGCGCTGGGACGAGTACGCCAGCTACCAGGCCGAGCTCGAC CTCTGGGACCTGCTGCAGAGGGAGCCGCCGACGGAGATACCCAAGAAGCAGGAGCCGGGCAGGCTCGAGACGTCC AACCTCGACGTCGAGAGCATCTACCCCATGAACGGGGACTGGGCCGGCCAGCTGCAGTACCGCGCCGAGTGGGAG ACGTGGCGGCGAGAGCCCCCGTCAGGTTAG |