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| Protein ID | Hirsu2|3683 |
| Gene name | |
| Location | Contig_1991:585..2263 |
| Strand | - |
| Gene length (bp) | 1678 |
| Transcript length (bp) | 1584 |
| Coding sequence length (bp) | 1584 |
| Protein length (aa) | 528 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74839|YC1B_SCHPO | Uncharacterized MscS family protein C1183.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1183.11 PE=1 SV=1 | 137 | 501 | 2.0E-61 |
| sp|O14050|YEYH_SCHPO | Uncharacterized MscS family protein C2C4.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.17c PE=3 SV=1 | 96 | 504 | 2.0E-39 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum|Lysosome/Vacuole|Golgi apparatus | Signal peptide|Transmembrane domain | 0.1051 | 0.2227 | 0.0136 | 0.41 | 0.1311 | 0.016 | 0.8601 | 0.6001 | 0.6779 | 0.0205 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 139 | 161 | 22 |
| 2 | 171 | 193 | 22 |
| 3 | 222 | 244 | 22 |
| 4 | 264 | 286 | 22 |
| 5 | 484 | 501 | 17 |
| Orthofinder run ID | 4 |
| Orthogroup | 5160 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3683 MAGLAAPRSQPDGAEPRPPPLHVHQEEEFDEKHTAPSLDTFNTLATPPDTDALSPSGQRIEARRLNDDLELLRAE RLVSNQEQEQQLGSKSKNRSHHPEPEDAFNQPSTKDPTVKLKNKDAALYKFWLLLKKFPRSVRYLLYLFPGAALL LVPVLLGGIEFRPDDKLVGGVGGVQLMWFGIWLEVVWCSLWLSRLLTSLLPSLFYTVAHVGGSINARKWKEIGSR LELPTALFLWFLAILVSFKPTTDGHRGRVPPGRDADVGVAWIDVVNKVIIALFTLATLNLVEKLVIQWIATSFHQ RTYSTRIENNKADTLHLVRLYEYAKAKLEHSDSFWQRATGTTNTGAHTPLKSLHNNARHVLGKVGQVANRVGNDL IGRKVNTNVPRKVVSELLRTTTASHSLARLIYRSLVRDGRDTVYPDDLAVVFDEQDDIDATFSVFDKDLNGDISI DEFEAVCNEIHLEKKAIAASLKDLDSVIRKLDNVFLFIIVVIAIIVFISILPSSSSSSSTPSTSATASPSTAPPA PT* |
| Coding | >Hirsu2|3683 ATGGCCGGCTTGGCGGCCCCTCGTTCGCAGCCAGACGGCGCCGAGCCTCGGCCGCCGCCGCTCCACGTCCACCAG GAGGAGGAGTTCGACGAGAAGCACACGGCGCCGTCGCTCGACACGTTCAACACGCTGGCCACGCCGCCCGACACC GACGCCCTGTCGCCCTCGGGCCAGCGCATCGAGGCCAGGCGTCTTAACGACGACCTCGAGCTCCTCCGCGCCGAG CGCCTCGTCTCCAACCAGGAGCAGGAGCAGCAGCTGGGCTCCAAGTCTAAGAACCGGAGCCACCACCCCGAGCCC GAGGACGCCTTCAACCAGCCCAGCACCAAGGACCCGACCGTCAAGCTCAAGAACAAGGACGCCGCCCTCTACAAG TTCTGGCTGCTGCTCAAAAAGTTCCCCCGCTCCGTCCGCTACCTCCTCTACCTCTTCCCCGGCGCCGCCCTGCTG CTCGTGCCCGTCCTCCTCGGCGGCATCGAGTTCCGCCCCGACGACAAGCTCGTCGGCGGCGTCGGCGGCGTCCAG CTCATGTGGTTCGGCATCTGGCTCGAGGTCGTCTGGTGCTCGCTCTGGCTGTCGCGCCTGCTCACAAGTCTGCTG CCCAGCCTCTTCTACACCGTCGCCCACGTCGGCGGCTCCATCAACGCCCGTAAGTGGAAGGAGATTGGCAGCCGG CTCGAGCTGCCCACCGCCCTCTTCCTCTGGTTCCTCGCCATCCTCGTCTCCTTCAAGCCCACCACCGACGGCCAC CGCGGCCGCGTGCCGCCCGGCCGCGACGCCGACGTCGGCGTCGCCTGGATCGACGTCGTCAACAAGGTCATCATC GCCCTCTTCACCCTCGCCACCCTCAACCTGGTGGAGAAGCTGGTGATCCAGTGGATCGCCACCTCCTTCCACCAG CGCACCTACTCGACCCGCATCGAGAACAACAAGGCCGACACGCTCCACCTCGTCCGGCTGTACGAGTATGCCAAG GCCAAGCTCGAGCACAGCGACAGCTTCTGGCAGCGCGCCACCGGCACCACCAACACCGGCGCCCACACGCCCCTC AAGTCGCTGCACAACAACGCCCGCCACGTGCTGGGCAAGGTCGGCCAGGTGGCCAACCGCGTCGGCAACGACCTC ATCGGCCGCAAGGTCAACACCAACGTGCCGCGCAAGGTCGTCTCCGAGCTCCTCCGCACCACGACCGCCTCGCAC AGCCTGGCCCGCCTCATCTACCGCAGCCTCGTCCGCGACGGCCGCGACACCGTCTACCCGGACGACCTGGCCGTC GTCTTCGACGAGCAGGACGACATCGACGCCACCTTCAGCGTCTTCGACAAGGACCTCAACGGCGACATCTCCATC GACGAGTTCGAGGCCGTCTGCAACGAGATCCACCTGGAGAAGAAGGCCATCGCCGCCTCGCTCAAGGACCTCGAC TCCGTCATCCGCAAGCTCGACAACGTCTTCCTCTTCATCATCGTCGTCATCGCCATCATCGTCTTCATCTCCATC CTTCCGTCATCTTCGTCTTCATCAAGCACCCCTTCGACGTCGGCGACCGCGTCACCATCTACGGCTCCACCGGCG CCGACATGA |
| Transcript | >Hirsu2|3683 ATGGCCGGCTTGGCGGCCCCTCGTTCGCAGCCAGACGGCGCCGAGCCTCGGCCGCCGCCGCTCCACGTCCACCAG GAGGAGGAGTTCGACGAGAAGCACACGGCGCCGTCGCTCGACACGTTCAACACGCTGGCCACGCCGCCCGACACC GACGCCCTGTCGCCCTCGGGCCAGCGCATCGAGGCCAGGCGTCTTAACGACGACCTCGAGCTCCTCCGCGCCGAG CGCCTCGTCTCCAACCAGGAGCAGGAGCAGCAGCTGGGCTCCAAGTCTAAGAACCGGAGCCACCACCCCGAGCCC GAGGACGCCTTCAACCAGCCCAGCACCAAGGACCCGACCGTCAAGCTCAAGAACAAGGACGCCGCCCTCTACAAG TTCTGGCTGCTGCTCAAAAAGTTCCCCCGCTCCGTCCGCTACCTCCTCTACCTCTTCCCCGGCGCCGCCCTGCTG CTCGTGCCCGTCCTCCTCGGCGGCATCGAGTTCCGCCCCGACGACAAGCTCGTCGGCGGCGTCGGCGGCGTCCAG CTCATGTGGTTCGGCATCTGGCTCGAGGTCGTCTGGTGCTCGCTCTGGCTGTCGCGCCTGCTCACAAGTCTGCTG CCCAGCCTCTTCTACACCGTCGCCCACGTCGGCGGCTCCATCAACGCCCGTAAGTGGAAGGAGATTGGCAGCCGG CTCGAGCTGCCCACCGCCCTCTTCCTCTGGTTCCTCGCCATCCTCGTCTCCTTCAAGCCCACCACCGACGGCCAC CGCGGCCGCGTGCCGCCCGGCCGCGACGCCGACGTCGGCGTCGCCTGGATCGACGTCGTCAACAAGGTCATCATC GCCCTCTTCACCCTCGCCACCCTCAACCTGGTGGAGAAGCTGGTGATCCAGTGGATCGCCACCTCCTTCCACCAG CGCACCTACTCGACCCGCATCGAGAACAACAAGGCCGACACGCTCCACCTCGTCCGGCTGTACGAGTATGCCAAG GCCAAGCTCGAGCACAGCGACAGCTTCTGGCAGCGCGCCACCGGCACCACCAACACCGGCGCCCACACGCCCCTC AAGTCGCTGCACAACAACGCCCGCCACGTGCTGGGCAAGGTCGGCCAGGTGGCCAACCGCGTCGGCAACGACCTC ATCGGCCGCAAGGTCAACACCAACGTGCCGCGCAAGGTCGTCTCCGAGCTCCTCCGCACCACGACCGCCTCGCAC AGCCTGGCCCGCCTCATCTACCGCAGCCTCGTCCGCGACGGCCGCGACACCGTCTACCCGGACGACCTGGCCGTC GTCTTCGACGAGCAGGACGACATCGACGCCACCTTCAGCGTCTTCGACAAGGACCTCAACGGCGACATCTCCATC GACGAGTTCGAGGCCGTCTGCAACGAGATCCACCTGGAGAAGAAGGCCATCGCCGCCTCGCTCAAGGACCTCGAC TCCGTCATCCGCAAGCTCGACAACGTCTTCCTCTTCATCATCGTCGTCATCGCCATCATCGTCTTCATCTCCATC CTTCCGTCATCTTCGTCTTCATCAAGCACCCCTTCGACGTCGGCGACCGCGTCACCATCTACGGCTCCACCGGCG CCGACATGA |
| Gene | >Hirsu2|3683 ATGGCCGGCTTGGCGGCCCCTCGTTCGCAGCCAGACGGCGCCGAGCCTCGGCCGCCGCCGCTCCACGTCCACCAG GAGGAGGAGTTCGACGAGAAGCACACGGCGCCGTCGCTCGACACGTTCAACACGCTGGCCACGCCGCCCGACACC GACGCCCTGTCGCCCTCGGGCCAGCGCATCGAGGCCAGGCGTCTTAACGACGACCTCGAGCTCCTCCGCGCCGAG CGCCTCGTCTCCAACCAGGAGCAGGAGCAGCAGCTGGGCTCCAAGTCTAAGAACCGGAGCCACCACCCCGAGCCC GAGGACGCCTTCAACCAGCCCAGCACCAAGGACCCGACCGTCAAGCTCAAGAACAAGGACGCCGCCCTCTACAAG TTCTGGCTGCTGCTCAAAAAGTTCCCCCGCTCCGTCCGCTACCTCCTCTACCTCTTCCCCGGCGCCGCCCTGCTG CTCGTGCCCGTCCTCCTCGGCGGCATCGAGTTCCGCCCCGACGACAAGCTCGTCGGCGGCGTCGGCGGCGTCCAG CTCATGTGGTTCGGCATCTGGCTCGAGGTCGTCTGGTGCTCGCTCTGGCTGTCGCGCCTGCTCACAAGTCTGCTG CCCAGCCTCTTCTACACCGTCGCCCACGTCGGCGGCTCCATCAACGCCCGTAAGTGGAAGGAGATTGGCAGCCGG CTCGAGCTGCCCACCGCCCTCTTCCTCTGGTTCCTCGCCATCCTCGTCTCCTTCAAGCCCACCACCGACGGCCAC CGCGGCCGCGTGCCGCCCGGCCGCGACGCCGACGTCGGCGTCGCCTGGATCGACGTCGTCAACAAGGTCATCATC GCCCTCTTCACCCTCGCCACCCTCAACCTGGTGGAGAAGCTGGTGATCCAGTGGATCGCCACCTCCTTCCACCAG CGCACCTACTCGACCCGCATCGAGAACAACAAGGCCGACACGCTCCACCTCGTCCGGCTGTACGAGTATGCCAAG GCCAAGCTCGAGCACAGCGACAGCTTCTGGCAGCGCGCCACCGGCACCACCAACACCGGCGCCCACACGCCCCTC AAGTCGCTGCACAACAACGCCCGCCACGTGCTGGGCAAGGTCGGCCAGGTGGCCAACCGCGTCGGCAACGACCTC ATCGGCCGCAAGGTCAACACCAACGTGCCGCGCAAGGTCGTCTCCGAGCTCCTCCGCACCACGACCGCCTCGCAC AGCCTGGCCCGCCTCATCTACCGCAGCCTCGTCCGCGACGGCCGCGACACCGTCTACCCGGACGACCTGGCCGTC GTCTTCGACGAGCAGGACGACATCGACGCCACCTTCAGCGTCTTCGACAAGGACCTCAACGGCGACATCTCCATC GACGAGTTCGAGGCCGTCTGCAACGAGATCCACCTGGAGAAGAAGGCCATCGCCGCCTCGCTCAAGGACCTCGAC TCCGTCATCCGCAAGCTCGACAACGTCTTCCTCTTCATCATCGTCGTCATCGCCATCATCGTCTTCATCTCCATC CTGTCCGGCTCCGCCGCCGCCGGCCTCGCCTCCGCCGGCACCTCCTTCCTCGGCCTGGCCTGGATGCTGCAGGCC ACGGCCCAGGAGTTTCTGCAGTCCGTCATCTTCGTCTTCATCAAGCACCCCTTCGACGTCGGCGACCGCGTCACC ATCTACGGCTCCACCGGCGCCGACATGA |