Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3683
Gene name
LocationContig_1991:585..2263
Strand-
Gene length (bp)1678
Transcript length (bp)1584
Coding sequence length (bp)1584
Protein length (aa) 528

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74839|YC1B_SCHPO Uncharacterized MscS family protein C1183.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1183.11 PE=1 SV=1 137 501 2.0E-61
sp|O14050|YEYH_SCHPO Uncharacterized MscS family protein C2C4.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.17c PE=3 SV=1 96 504 2.0E-39

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum|Lysosome/Vacuole|Golgi apparatus Signal peptide|Transmembrane domain 0.1051 0.2227 0.0136 0.41 0.1311 0.016 0.8601 0.6001 0.6779 0.0205

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 139 161 22
2 171 193 22
3 222 244 22
4 264 286 22
5 484 501 17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5160
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4631
Ophiocordyceps australis map64 (Brazil) OphauB2|1668
Ophiocordyceps camponoti-rufipedis Ophun1|5836
Ophiocordyceps kimflemingae Ophio5|1493
Ophiocordyceps subramaniannii Hirsu2|3683 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3683
MAGLAAPRSQPDGAEPRPPPLHVHQEEEFDEKHTAPSLDTFNTLATPPDTDALSPSGQRIEARRLNDDLELLRAE
RLVSNQEQEQQLGSKSKNRSHHPEPEDAFNQPSTKDPTVKLKNKDAALYKFWLLLKKFPRSVRYLLYLFPGAALL
LVPVLLGGIEFRPDDKLVGGVGGVQLMWFGIWLEVVWCSLWLSRLLTSLLPSLFYTVAHVGGSINARKWKEIGSR
LELPTALFLWFLAILVSFKPTTDGHRGRVPPGRDADVGVAWIDVVNKVIIALFTLATLNLVEKLVIQWIATSFHQ
RTYSTRIENNKADTLHLVRLYEYAKAKLEHSDSFWQRATGTTNTGAHTPLKSLHNNARHVLGKVGQVANRVGNDL
IGRKVNTNVPRKVVSELLRTTTASHSLARLIYRSLVRDGRDTVYPDDLAVVFDEQDDIDATFSVFDKDLNGDISI
DEFEAVCNEIHLEKKAIAASLKDLDSVIRKLDNVFLFIIVVIAIIVFISILPSSSSSSSTPSTSATASPSTAPPA
PT*
Coding >Hirsu2|3683
ATGGCCGGCTTGGCGGCCCCTCGTTCGCAGCCAGACGGCGCCGAGCCTCGGCCGCCGCCGCTCCACGTCCACCAG
GAGGAGGAGTTCGACGAGAAGCACACGGCGCCGTCGCTCGACACGTTCAACACGCTGGCCACGCCGCCCGACACC
GACGCCCTGTCGCCCTCGGGCCAGCGCATCGAGGCCAGGCGTCTTAACGACGACCTCGAGCTCCTCCGCGCCGAG
CGCCTCGTCTCCAACCAGGAGCAGGAGCAGCAGCTGGGCTCCAAGTCTAAGAACCGGAGCCACCACCCCGAGCCC
GAGGACGCCTTCAACCAGCCCAGCACCAAGGACCCGACCGTCAAGCTCAAGAACAAGGACGCCGCCCTCTACAAG
TTCTGGCTGCTGCTCAAAAAGTTCCCCCGCTCCGTCCGCTACCTCCTCTACCTCTTCCCCGGCGCCGCCCTGCTG
CTCGTGCCCGTCCTCCTCGGCGGCATCGAGTTCCGCCCCGACGACAAGCTCGTCGGCGGCGTCGGCGGCGTCCAG
CTCATGTGGTTCGGCATCTGGCTCGAGGTCGTCTGGTGCTCGCTCTGGCTGTCGCGCCTGCTCACAAGTCTGCTG
CCCAGCCTCTTCTACACCGTCGCCCACGTCGGCGGCTCCATCAACGCCCGTAAGTGGAAGGAGATTGGCAGCCGG
CTCGAGCTGCCCACCGCCCTCTTCCTCTGGTTCCTCGCCATCCTCGTCTCCTTCAAGCCCACCACCGACGGCCAC
CGCGGCCGCGTGCCGCCCGGCCGCGACGCCGACGTCGGCGTCGCCTGGATCGACGTCGTCAACAAGGTCATCATC
GCCCTCTTCACCCTCGCCACCCTCAACCTGGTGGAGAAGCTGGTGATCCAGTGGATCGCCACCTCCTTCCACCAG
CGCACCTACTCGACCCGCATCGAGAACAACAAGGCCGACACGCTCCACCTCGTCCGGCTGTACGAGTATGCCAAG
GCCAAGCTCGAGCACAGCGACAGCTTCTGGCAGCGCGCCACCGGCACCACCAACACCGGCGCCCACACGCCCCTC
AAGTCGCTGCACAACAACGCCCGCCACGTGCTGGGCAAGGTCGGCCAGGTGGCCAACCGCGTCGGCAACGACCTC
ATCGGCCGCAAGGTCAACACCAACGTGCCGCGCAAGGTCGTCTCCGAGCTCCTCCGCACCACGACCGCCTCGCAC
AGCCTGGCCCGCCTCATCTACCGCAGCCTCGTCCGCGACGGCCGCGACACCGTCTACCCGGACGACCTGGCCGTC
GTCTTCGACGAGCAGGACGACATCGACGCCACCTTCAGCGTCTTCGACAAGGACCTCAACGGCGACATCTCCATC
GACGAGTTCGAGGCCGTCTGCAACGAGATCCACCTGGAGAAGAAGGCCATCGCCGCCTCGCTCAAGGACCTCGAC
TCCGTCATCCGCAAGCTCGACAACGTCTTCCTCTTCATCATCGTCGTCATCGCCATCATCGTCTTCATCTCCATC
CTTCCGTCATCTTCGTCTTCATCAAGCACCCCTTCGACGTCGGCGACCGCGTCACCATCTACGGCTCCACCGGCG
CCGACATGA
Transcript >Hirsu2|3683
ATGGCCGGCTTGGCGGCCCCTCGTTCGCAGCCAGACGGCGCCGAGCCTCGGCCGCCGCCGCTCCACGTCCACCAG
GAGGAGGAGTTCGACGAGAAGCACACGGCGCCGTCGCTCGACACGTTCAACACGCTGGCCACGCCGCCCGACACC
GACGCCCTGTCGCCCTCGGGCCAGCGCATCGAGGCCAGGCGTCTTAACGACGACCTCGAGCTCCTCCGCGCCGAG
CGCCTCGTCTCCAACCAGGAGCAGGAGCAGCAGCTGGGCTCCAAGTCTAAGAACCGGAGCCACCACCCCGAGCCC
GAGGACGCCTTCAACCAGCCCAGCACCAAGGACCCGACCGTCAAGCTCAAGAACAAGGACGCCGCCCTCTACAAG
TTCTGGCTGCTGCTCAAAAAGTTCCCCCGCTCCGTCCGCTACCTCCTCTACCTCTTCCCCGGCGCCGCCCTGCTG
CTCGTGCCCGTCCTCCTCGGCGGCATCGAGTTCCGCCCCGACGACAAGCTCGTCGGCGGCGTCGGCGGCGTCCAG
CTCATGTGGTTCGGCATCTGGCTCGAGGTCGTCTGGTGCTCGCTCTGGCTGTCGCGCCTGCTCACAAGTCTGCTG
CCCAGCCTCTTCTACACCGTCGCCCACGTCGGCGGCTCCATCAACGCCCGTAAGTGGAAGGAGATTGGCAGCCGG
CTCGAGCTGCCCACCGCCCTCTTCCTCTGGTTCCTCGCCATCCTCGTCTCCTTCAAGCCCACCACCGACGGCCAC
CGCGGCCGCGTGCCGCCCGGCCGCGACGCCGACGTCGGCGTCGCCTGGATCGACGTCGTCAACAAGGTCATCATC
GCCCTCTTCACCCTCGCCACCCTCAACCTGGTGGAGAAGCTGGTGATCCAGTGGATCGCCACCTCCTTCCACCAG
CGCACCTACTCGACCCGCATCGAGAACAACAAGGCCGACACGCTCCACCTCGTCCGGCTGTACGAGTATGCCAAG
GCCAAGCTCGAGCACAGCGACAGCTTCTGGCAGCGCGCCACCGGCACCACCAACACCGGCGCCCACACGCCCCTC
AAGTCGCTGCACAACAACGCCCGCCACGTGCTGGGCAAGGTCGGCCAGGTGGCCAACCGCGTCGGCAACGACCTC
ATCGGCCGCAAGGTCAACACCAACGTGCCGCGCAAGGTCGTCTCCGAGCTCCTCCGCACCACGACCGCCTCGCAC
AGCCTGGCCCGCCTCATCTACCGCAGCCTCGTCCGCGACGGCCGCGACACCGTCTACCCGGACGACCTGGCCGTC
GTCTTCGACGAGCAGGACGACATCGACGCCACCTTCAGCGTCTTCGACAAGGACCTCAACGGCGACATCTCCATC
GACGAGTTCGAGGCCGTCTGCAACGAGATCCACCTGGAGAAGAAGGCCATCGCCGCCTCGCTCAAGGACCTCGAC
TCCGTCATCCGCAAGCTCGACAACGTCTTCCTCTTCATCATCGTCGTCATCGCCATCATCGTCTTCATCTCCATC
CTTCCGTCATCTTCGTCTTCATCAAGCACCCCTTCGACGTCGGCGACCGCGTCACCATCTACGGCTCCACCGGCG
CCGACATGA
Gene >Hirsu2|3683
ATGGCCGGCTTGGCGGCCCCTCGTTCGCAGCCAGACGGCGCCGAGCCTCGGCCGCCGCCGCTCCACGTCCACCAG
GAGGAGGAGTTCGACGAGAAGCACACGGCGCCGTCGCTCGACACGTTCAACACGCTGGCCACGCCGCCCGACACC
GACGCCCTGTCGCCCTCGGGCCAGCGCATCGAGGCCAGGCGTCTTAACGACGACCTCGAGCTCCTCCGCGCCGAG
CGCCTCGTCTCCAACCAGGAGCAGGAGCAGCAGCTGGGCTCCAAGTCTAAGAACCGGAGCCACCACCCCGAGCCC
GAGGACGCCTTCAACCAGCCCAGCACCAAGGACCCGACCGTCAAGCTCAAGAACAAGGACGCCGCCCTCTACAAG
TTCTGGCTGCTGCTCAAAAAGTTCCCCCGCTCCGTCCGCTACCTCCTCTACCTCTTCCCCGGCGCCGCCCTGCTG
CTCGTGCCCGTCCTCCTCGGCGGCATCGAGTTCCGCCCCGACGACAAGCTCGTCGGCGGCGTCGGCGGCGTCCAG
CTCATGTGGTTCGGCATCTGGCTCGAGGTCGTCTGGTGCTCGCTCTGGCTGTCGCGCCTGCTCACAAGTCTGCTG
CCCAGCCTCTTCTACACCGTCGCCCACGTCGGCGGCTCCATCAACGCCCGTAAGTGGAAGGAGATTGGCAGCCGG
CTCGAGCTGCCCACCGCCCTCTTCCTCTGGTTCCTCGCCATCCTCGTCTCCTTCAAGCCCACCACCGACGGCCAC
CGCGGCCGCGTGCCGCCCGGCCGCGACGCCGACGTCGGCGTCGCCTGGATCGACGTCGTCAACAAGGTCATCATC
GCCCTCTTCACCCTCGCCACCCTCAACCTGGTGGAGAAGCTGGTGATCCAGTGGATCGCCACCTCCTTCCACCAG
CGCACCTACTCGACCCGCATCGAGAACAACAAGGCCGACACGCTCCACCTCGTCCGGCTGTACGAGTATGCCAAG
GCCAAGCTCGAGCACAGCGACAGCTTCTGGCAGCGCGCCACCGGCACCACCAACACCGGCGCCCACACGCCCCTC
AAGTCGCTGCACAACAACGCCCGCCACGTGCTGGGCAAGGTCGGCCAGGTGGCCAACCGCGTCGGCAACGACCTC
ATCGGCCGCAAGGTCAACACCAACGTGCCGCGCAAGGTCGTCTCCGAGCTCCTCCGCACCACGACCGCCTCGCAC
AGCCTGGCCCGCCTCATCTACCGCAGCCTCGTCCGCGACGGCCGCGACACCGTCTACCCGGACGACCTGGCCGTC
GTCTTCGACGAGCAGGACGACATCGACGCCACCTTCAGCGTCTTCGACAAGGACCTCAACGGCGACATCTCCATC
GACGAGTTCGAGGCCGTCTGCAACGAGATCCACCTGGAGAAGAAGGCCATCGCCGCCTCGCTCAAGGACCTCGAC
TCCGTCATCCGCAAGCTCGACAACGTCTTCCTCTTCATCATCGTCGTCATCGCCATCATCGTCTTCATCTCCATC
CTGTCCGGCTCCGCCGCCGCCGGCCTCGCCTCCGCCGGCACCTCCTTCCTCGGCCTGGCCTGGATGCTGCAGGCC
ACGGCCCAGGAGTTTCTGCAGTCCGTCATCTTCGTCTTCATCAAGCACCCCTTCGACGTCGGCGACCGCGTCACC
ATCTACGGCTCCACCGGCGCCGACATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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