© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3680 |
| Gene name | |
| Location | Contig_199:26170..27211 |
| Strand | - |
| Gene length (bp) | 1041 |
| Transcript length (bp) | 783 |
| Coding sequence length (bp) | 783 |
| Protein length (aa) | 261 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.573 | 0.6485 | 0.2543 | 0.077 | 0.117 | 0.1309 | 0.1388 | 0.1381 | 0.1704 | 0.011 |
| Orthofinder run ID | 4 |
| Orthogroup | 9404 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3680 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3680 MTSSHPRRALAHGSPCCSPPRAAKAGQEPDWSWTGTDERRGQPVSRAIAYSIAPSVAVNDVPRPAGTRPSLGGST EESERARKSPRRRRRGGAGPGPCSQSGEEEDDSHVRLLPQGPPPYAYPSLDPRIALFEEEEGAESRKTASFSASS SLFPSLRPQNSGKPRHRLRAWEQRGSCGQMGSKAETWPEKGRKTGRREGARANRRSAGARPSVAQPSSRYLSLPM PLPLPHPYLSSPIFLSPSVFGACEAGPTAISAVGT* |
| Coding | >Hirsu2|3680 ATGACCAGCAGCCATCCTCGTCGGGCGCTGGCCCACGGATCGCCCTGCTGCTCGCCCCCGCGCGCCGCCAAGGCC GGCCAGGAGCCGGACTGGTCATGGACGGGGACAGACGAGCGCAGGGGCCAGCCCGTCTCGCGTGCGATAGCCTAT TCCATCGCGCCCTCAGTTGCGGTCAACGACGTGCCCCGACCGGCCGGGACTCGGCCGAGTCTGGGCGGCAGCACG GAAGAGTCCGAGAGAGCACGGAAGAGCCCGAGACGAAGACGGAGAGGTGGTGCCGGTCCAGGGCCGTGCTCCCAG AGCGGTGAAGAGGAAGACGACTCGCACGTCCGTCTTCTTCCCCAAGGGCCTCCTCCCTACGCATACCCGTCTCTT GACCCACGGATTGCCCTCTTTGAGGAAGAGGAAGGAGCCGAGTCTCGGAAGACGGCCTCTTTTTCTGCTTCCTCT TCCTTATTCCCTTCTTTACGTCCCCAGAACAGCGGCAAGCCTCGTCACCGTCTGCGGGCGTGGGAGCAGCGAGGC TCATGCGGACAGATGGGCAGCAAGGCAGAGACGTGGCCTGAGAAGGGGAGGAAAACTGGCAGAAGGGAGGGTGCT CGCGCGAATCGCCGTTCTGCCGGTGCCCGACCCTCCGTCGCGCAGCCGAGCAGCCGGTATCTGTCTTTGCCTATG CCTCTTCCTCTTCCCCATCCCTACCTCTCCTCTCCCATTTTTCTTTCACCCTCAGTTTTCGGTGCGTGTGAAGCA GGGCCAACAGCCATCTCCGCCGTCGGAACCTGA |
| Transcript | >Hirsu2|3680 ATGACCAGCAGCCATCCTCGTCGGGCGCTGGCCCACGGATCGCCCTGCTGCTCGCCCCCGCGCGCCGCCAAGGCC GGCCAGGAGCCGGACTGGTCATGGACGGGGACAGACGAGCGCAGGGGCCAGCCCGTCTCGCGTGCGATAGCCTAT TCCATCGCGCCCTCAGTTGCGGTCAACGACGTGCCCCGACCGGCCGGGACTCGGCCGAGTCTGGGCGGCAGCACG GAAGAGTCCGAGAGAGCACGGAAGAGCCCGAGACGAAGACGGAGAGGTGGTGCCGGTCCAGGGCCGTGCTCCCAG AGCGGTGAAGAGGAAGACGACTCGCACGTCCGTCTTCTTCCCCAAGGGCCTCCTCCCTACGCATACCCGTCTCTT GACCCACGGATTGCCCTCTTTGAGGAAGAGGAAGGAGCCGAGTCTCGGAAGACGGCCTCTTTTTCTGCTTCCTCT TCCTTATTCCCTTCTTTACGTCCCCAGAACAGCGGCAAGCCTCGTCACCGTCTGCGGGCGTGGGAGCAGCGAGGC TCATGCGGACAGATGGGCAGCAAGGCAGAGACGTGGCCTGAGAAGGGGAGGAAAACTGGCAGAAGGGAGGGTGCT CGCGCGAATCGCCGTTCTGCCGGTGCCCGACCCTCCGTCGCGCAGCCGAGCAGCCGGTATCTGTCTTTGCCTATG CCTCTTCCTCTTCCCCATCCCTACCTCTCCTCTCCCATTTTTCTTTCACCCTCAGTTTTCGGTGCGTGTGAAGCA GGGCCAACAGCCATCTCCGCCGTCGGAACCTGA |
| Gene | >Hirsu2|3680 ATGACCAGCAGCCATCCTCGTCGGGCGCTGGCCCACGGATCGCCCTGCTGCTCGCCCCCGCGCGCCGCCAAGGCC GGCCAGGAGCCGGACTGGTCATGGACGGGGACAGACGAGCGCAGGGGCCAGCCCGTCTCGCGTGCGATAGCCTAT TCCATCGCGCCCTCAGTTGCGGTCAACGACGTGCCCCGACCGGCCGGGACTCGGCCGAGTCTGGGCGGCAGGTGA CCGCGAAGAGTTTTTTTTCCCTTCTCTCTTGATGTCTCTCTCTTCTTGTTTCTCTTCTTGTTCTTTTTTTTTTTT TCGTCTTATTCAATTTCTTCTCGTCCCCCACCCGTCCCGTTCTTCTCCCTGGTGCTTTGCCGAGCAAGGGGTTCC GGACCGCATGCTGCCTCCGGGCCGCGGGACGCGGAGCAACAGCATCGTTTGCATAACTGCATCTCGCGACTGCTC TGCCGATCGGGAAACGCGGACGAGCACAGCACGGAAGAGTCCGAGAGAGCACGGAAGAGCCCGAGACGAAGACGG AGAGGTGGTGCCGGTCCAGGGCCGTGCTCCCAGAGCGGTGAAGAGGAAGACGACTCGCACGTCCGTCTTCTTCCC CAAGGGCCTCCTCCCTACGCATACCCGTCTCTTGACCCACGGATTGCCCTCTTTGAGGAAGAGGAAGGAGCCGAG TCTCGGAAGACGGCCTCTTTTTCTGCTTCCTCTTCCTTATTCCCTTCTTTACGTCCCCAGAACAGCGGCAAGCCT CGTCACCGTCTGCGGGCGTGGGAGCAGCGAGGCTCATGCGGACAGATGGGCAGCAAGGCAGAGACGTGGCCTGAG AAGGGGAGGAAAACTGGCAGAAGGGAGGGTGCTCGCGCGAATCGCCGTTCTGCCGGTGCCCGACCCTCCGTCGCG CAGCCGAGCAGCCGGTATCTGTCTTTGCCTATGCCTCTTCCTCTTCCCCATCCCTACCTCTCCTCTCCCATTTTT CTTTCACCCTCAGTTTTCGGTGCGTGTGAAGCAGGGCCAACAGCCATCTCCGCCGTCGGAACCTGA |