Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3677
Gene name
LocationContig_199:20465..20896
Strand+
Gene length (bp)431
Transcript length (bp)354
Coding sequence length (bp)354
Protein length (aa) 118

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.3675 0.3184 0.7458 0.1236 0.4404 0.0561 0.1596 0.2483 0.2628 0.1373

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6111
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|05483
Ophiocordyceps camponoti-rufipedis Ophun1|4990
Ophiocordyceps kimflemingae Ophio5|7056
Ophiocordyceps subramaniannii Hirsu2|3677 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3677
MLWPTLSSSVHESKPRSQVENPYPMRLRHLQRTTTGNLTVRTDTMCDWEEFLYSCNHSVLRLKSYCHFARNEPDH
QCYGVKVLRNSWQQGVLCEKCTAQCQAANTKTQDSSPKQAVV*
Coding >Hirsu2|3677
ATGCTGTGGCCCACACTTTCATCTTCTGTTCACGAGTCGAAGCCCCGATCCCAGGTCGAGAACCCCTATCCTATG
CGCTTGCGACATTTGCAAAGAACGACAACAGGAAACTTGACCGTCCGGACCGACACCATGTGTGACTGGGAAGAA
TTCCTCTACAGCTGCAACCACTCCGTTCTACGGCTCAAGTCCTACTGCCACTTCGCCCGGAACGAGCCGGACCAC
CAATGCTACGGGGTCAAGGTGCTGAGGAACTCGTGGCAGCAGGGGGTGCTGTGCGAGAAGTGCACGGCGCAGTGC
CAAGCCGCCAACACGAAGACACAAGACTCTTCCCCGAAGCAGGCTGTTGTCTGA
Transcript >Hirsu2|3677
ATGCTGTGGCCCACACTTTCATCTTCTGTTCACGAGTCGAAGCCCCGATCCCAGGTCGAGAACCCCTATCCTATG
CGCTTGCGACATTTGCAAAGAACGACAACAGGAAACTTGACCGTCCGGACCGACACCATGTGTGACTGGGAAGAA
TTCCTCTACAGCTGCAACCACTCCGTTCTACGGCTCAAGTCCTACTGCCACTTCGCCCGGAACGAGCCGGACCAC
CAATGCTACGGGGTCAAGGTGCTGAGGAACTCGTGGCAGCAGGGGGTGCTGTGCGAGAAGTGCACGGCGCAGTGC
CAAGCCGCCAACACGAAGACACAAGACTCTTCCCCGAAGCAGGCTGTTGTCTGA
Gene >Hirsu2|3677
ATGCTGTGGCCCACACTTTCATCTTCTGTTCACGAGTCGAAGCCCCGATCCCAGGTCGAGAACCCCTATCCTATG
CGCTTGCGACATTTGCAAAGAACGACAACAGGAAACTTGACGTAAGTTGAGCGATCGGAAGGCGAACCATCGGGC
CGCGAGGCGGAAACGGGTTTTGCTGACCGAGGAGCCAGCGCAGCGTCCGGACCGACACCATGTGTGACTGGGAAG
AATTCCTCTACAGCTGCAACCACTCCGTTCTACGGCTCAAGTCCTACTGCCACTTCGCCCGGAACGAGCCGGACC
ACCAATGCTACGGGGTCAAGGTGCTGAGGAACTCGTGGCAGCAGGGGGTGCTGTGCGAGAAGTGCACGGCGCAGT
GCCAAGCCGCCAACACGAAGACACAAGACTCTTCCCCGAAGCAGGCTGTTGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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