Protein ID | Hirsu2|3677 |
Gene name | |
Location | Contig_199:20465..20896 |
Strand | + |
Gene length (bp) | 431 |
Transcript length (bp) | 354 |
Coding sequence length (bp) | 354 |
Protein length (aa) | 118 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.3675 | 0.3184 | 0.7458 | 0.1236 | 0.4404 | 0.0561 | 0.1596 | 0.2483 | 0.2628 | 0.1373 |
Orthofinder run ID | 4 |
Orthogroup | 6111 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3677 MLWPTLSSSVHESKPRSQVENPYPMRLRHLQRTTTGNLTVRTDTMCDWEEFLYSCNHSVLRLKSYCHFARNEPDH QCYGVKVLRNSWQQGVLCEKCTAQCQAANTKTQDSSPKQAVV* |
Coding | >Hirsu2|3677 ATGCTGTGGCCCACACTTTCATCTTCTGTTCACGAGTCGAAGCCCCGATCCCAGGTCGAGAACCCCTATCCTATG CGCTTGCGACATTTGCAAAGAACGACAACAGGAAACTTGACCGTCCGGACCGACACCATGTGTGACTGGGAAGAA TTCCTCTACAGCTGCAACCACTCCGTTCTACGGCTCAAGTCCTACTGCCACTTCGCCCGGAACGAGCCGGACCAC CAATGCTACGGGGTCAAGGTGCTGAGGAACTCGTGGCAGCAGGGGGTGCTGTGCGAGAAGTGCACGGCGCAGTGC CAAGCCGCCAACACGAAGACACAAGACTCTTCCCCGAAGCAGGCTGTTGTCTGA |
Transcript | >Hirsu2|3677 ATGCTGTGGCCCACACTTTCATCTTCTGTTCACGAGTCGAAGCCCCGATCCCAGGTCGAGAACCCCTATCCTATG CGCTTGCGACATTTGCAAAGAACGACAACAGGAAACTTGACCGTCCGGACCGACACCATGTGTGACTGGGAAGAA TTCCTCTACAGCTGCAACCACTCCGTTCTACGGCTCAAGTCCTACTGCCACTTCGCCCGGAACGAGCCGGACCAC CAATGCTACGGGGTCAAGGTGCTGAGGAACTCGTGGCAGCAGGGGGTGCTGTGCGAGAAGTGCACGGCGCAGTGC CAAGCCGCCAACACGAAGACACAAGACTCTTCCCCGAAGCAGGCTGTTGTCTGA |
Gene | >Hirsu2|3677 ATGCTGTGGCCCACACTTTCATCTTCTGTTCACGAGTCGAAGCCCCGATCCCAGGTCGAGAACCCCTATCCTATG CGCTTGCGACATTTGCAAAGAACGACAACAGGAAACTTGACGTAAGTTGAGCGATCGGAAGGCGAACCATCGGGC CGCGAGGCGGAAACGGGTTTTGCTGACCGAGGAGCCAGCGCAGCGTCCGGACCGACACCATGTGTGACTGGGAAG AATTCCTCTACAGCTGCAACCACTCCGTTCTACGGCTCAAGTCCTACTGCCACTTCGCCCGGAACGAGCCGGACC ACCAATGCTACGGGGTCAAGGTGCTGAGGAACTCGTGGCAGCAGGGGGTGCTGTGCGAGAAGTGCACGGCGCAGT GCCAAGCCGCCAACACGAAGACACAAGACTCTTCCCCGAAGCAGGCTGTTGTCTGA |