Protein ID | Hirsu2|3675 |
Gene name | |
Location | Contig_199:13272..16317 |
Strand | - |
Gene length (bp) | 3045 |
Transcript length (bp) | 2457 |
Coding sequence length (bp) | 2457 |
Protein length (aa) | 819 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 6.5E-03 | 509 | 530 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P34708|TRA1_CAEEL | Sex-determining transformer protein 1 OS=Caenorhabditis elegans GN=tra-1 PE=1 SV=1 | 509 | 590 | 5.0E-07 |
sp|P19544|WT1_HUMAN | Wilms tumor protein OS=Homo sapiens GN=WT1 PE=1 SV=2 | 511 | 606 | 7.0E-06 |
sp|O62651|WT1_PIG | Wilms tumor protein homolog OS=Sus scrofa GN=WT1 PE=2 SV=1 | 511 | 606 | 7.0E-06 |
sp|B7ZSG3|WT1A_XENLA | Wilms tumor protein homolog A OS=Xenopus laevis GN=wt1-a PE=2 SV=1 | 511 | 606 | 9.0E-06 |
sp|P49952|WT1_RAT | Wilms tumor protein homolog OS=Rattus norvegicus GN=Wt1 PE=2 SV=1 | 511 | 606 | 1.0E-05 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P34708|TRA1_CAEEL | Sex-determining transformer protein 1 OS=Caenorhabditis elegans GN=tra-1 PE=1 SV=1 | 509 | 590 | 5.0E-07 |
sp|P19544|WT1_HUMAN | Wilms tumor protein OS=Homo sapiens GN=WT1 PE=1 SV=2 | 511 | 606 | 7.0E-06 |
sp|O62651|WT1_PIG | Wilms tumor protein homolog OS=Sus scrofa GN=WT1 PE=2 SV=1 | 511 | 606 | 7.0E-06 |
sp|B7ZSG3|WT1A_XENLA | Wilms tumor protein homolog A OS=Xenopus laevis GN=wt1-a PE=2 SV=1 | 511 | 606 | 9.0E-06 |
sp|P49952|WT1_RAT | Wilms tumor protein homolog OS=Rattus norvegicus GN=Wt1 PE=2 SV=1 | 511 | 606 | 1.0E-05 |
sp|P22561|WT1_MOUSE | Wilms tumor protein homolog OS=Mus musculus GN=Wt1 PE=1 SV=1 | 511 | 606 | 1.0E-05 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.3106 | 0.945 | 0.2016 | 0.0178 | 0.0911 | 0.0072 | 0.085 | 0.031 | 0.0229 | 0.0094 |
Transcription Factor Class (based on PFAM domains) |
---|
C2H2 zinc finger |
Orthofinder run ID | 4 |
Orthogroup | 2515 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3675 MDQYDESQPVEGTPQPWNIYNFYAAPAKSDPWVPLGVIPPSVPDDPPGRAVPSEQFASQPSFLDWRSTGSPSECA TLPQDSGYGSIRQSYSIASASVHGGDDMVLDSQMGQVMGECHINNPEASQFDPQHHQPATGKYRCPDCSTWLKSP GELKKHTQRHIKSFKCPYVDCAKRQRGFSTANDLVRHKRSVHGDHSLPGRSFVCPYCVPGSKGPKIWPRADNFRS HLSRSHNLKLKSEDDHGKYIFQPPLRRNDLDGVGDSLELVDSRARPMSLQESPALSEGPRCDVGPHFFGGQMAQQ QTAEPPTVTRPDVNPTLSRPPRNVAAEPAVATVASPASQESPCVRPDALSRPVGFVVARTQGQTPVHTLHAQPEN VVHPRGSLSHLTHTDGDHDDNSDSNDGSDLCDDDCDDEDDNDNDDDCGDGRGAGPYASAPTSMDAAPLGQSQSAT GTKCEETWNLGASDCTMPWLASWHKPGGDESSRLLGETGLEGELEGQSDNDASPRAHVECPECEKIFSRRCELKK HFKRHLKPYGCTFKSCLKRFGSKNDWKRHESSQHFLLEKWDCDEPNCTKICQRRESFKSHLQRDHNMSDSDKIDE KLETCRLGRHCDPRFWCGFCVKIIQIDMNEKGGNSWTKRCDHIDNHLFGKEGLQKKSIKDWIHQEDQLEHPASTT AGATDPQPANRTEAGDGEGLERKRRSSGGTSSRPCKRASKSQATTYMWICCMCAAEMVLKTSSSCFETTWDRTWD RTWDRTWDRTWRWRQRLRRRKLVQQPSQSGLKGKTEQGLEGRRYRPCLYLGLDSRRADGGGFQASESM* |
Coding | >Hirsu2|3675 ATGGATCAATACGATGAATCTCAACCGGTCGAGGGCACGCCGCAGCCATGGAATATCTACAACTTCTACGCTGCG CCCGCCAAGAGCGACCCTTGGGTTCCCCTTGGCGTCATCCCGCCCTCGGTGCCGGACGACCCACCCGGCCGTGCC GTGCCCTCGGAGCAGTTCGCCTCTCAGCCCAGCTTTCTCGACTGGAGGAGTACCGGCTCGCCGTCCGAATGCGCC ACACTACCCCAAGACTCGGGATACGGAAGCATCCGCCAATCGTACAGTATAGCGAGCGCCTCCGTCCACGGCGGC GACGACATGGTCCTGGACTCGCAAATGGGTCAGGTCATGGGCGAATGCCACATCAATAACCCCGAGGCATCACAG TTCGATCCGCAGCATCACCAGCCGGCGACTGGAAAGTACCGCTGCCCAGACTGCAGCACTTGGCTCAAGAGCCCA GGCGAGCTCAAAAAGCATACGCAGCGCCACATCAAGTCCTTCAAATGTCCCTATGTCGACTGCGCCAAGAGGCAG CGAGGATTTAGTACTGCGAATGATCTCGTGCGACACAAGAGATCGGTTCACGGCGATCACAGCCTGCCAGGCCGG TCTTTCGTCTGCCCTTACTGCGTGCCCGGGAGCAAGGGACCCAAGATATGGCCGAGGGCAGACAACTTTCGCTCT CACCTGTCCCGCTCACATAACCTGAAGCTCAAATCGGAAGATGACCATGGAAAATACATATTCCAGCCGCCATTG CGGAGGAACGATCTAGACGGTGTTGGCGACTCCCTCGAACTCGTCGATTCGAGGGCTCGGCCGATGAGTCTCCAA GAGTCTCCGGCTCTGTCGGAAGGCCCGCGTTGCGACGTCGGTCCGCACTTCTTCGGGGGCCAAATGGCGCAGCAG CAAACTGCGGAGCCGCCGACGGTAACTCGGCCGGACGTCAATCCCACGCTTTCCCGGCCACCCCGCAATGTGGCG GCCGAACCGGCGGTGGCCACGGTTGCGTCCCCGGCCAGTCAGGAGTCTCCATGCGTCCGGCCAGACGCCCTTAGC CGGCCCGTTGGCTTTGTCGTCGCCCGTACACAAGGCCAGACCCCTGTGCACACGCTGCATGCGCAGCCCGAGAAC GTTGTCCACCCTCGCGGCAGCCTCTCTCACCTTACTCACACCGATGGTGACCACGACGACAACAGCGACAGCAAT GATGGCAGCGACCTTTGTGACGACGATTGTGACGACGAAGACGACAACGACAATGATGATGATTGTGGCGACGGC CGCGGCGCTGGGCCCTATGCCTCTGCTCCCACATCCATGGACGCCGCACCACTCGGGCAATCGCAGTCAGCCACA GGCACAAAATGTGAAGAGACCTGGAATCTGGGCGCTTCAGATTGCACGATGCCATGGCTTGCCAGCTGGCACAAG CCTGGAGGCGATGAGAGTAGCCGCCTCCTGGGCGAGACGGGGCTAGAGGGAGAGCTCGAGGGTCAGTCCGACAAC GACGCAAGTCCAAGGGCTCATGTCGAGTGCCCAGAATGTGAAAAGATCTTCAGCCGGCGGTGCGAGCTCAAGAAA CACTTCAAACGGCACCTCAAACCTTACGGGTGCACGTTCAAAAGCTGTCTGAAGAGATTTGGAAGTAAGAACGAC TGGAAGAGGCACGAAAGCAGCCAACATTTCTTGCTCGAGAAATGGGACTGCGACGAGCCCAACTGCACCAAGATT TGCCAGCGTCGGGAAAGCTTCAAGAGCCACTTGCAAAGAGACCACAACATGAGCGACTCGGACAAGATTGACGAG AAACTGGAGACGTGCCGGCTGGGGCGCCACTGCGACCCGCGCTTCTGGTGCGGCTTTTGCGTCAAGATCATCCAA ATCGACATGAACGAAAAGGGGGGCAACTCTTGGACCAAGAGGTGCGACCACATCGACAACCACTTGTTTGGCAAG GAGGGTCTGCAGAAGAAGTCGATCAAAGACTGGATACACCAAGAAGACCAGCTAGAACATCCGGCCTCGACAACG GCGGGCGCCACGGATCCGCAGCCGGCCAACAGGACGGAGGCGGGCGATGGCGAAGGGCTGGAAAGAAAACGAAGA AGCAGCGGCGGCACCAGCTCTCGGCCTTGCAAGAGGGCCAGCAAGTCACAGGCAACAACATACATGTGGATATGC TGCATGTGCGCGGCGGAAATGGTGCTCAAGACGTCGTCCAGCTGCTTCGAGACGACGTGGGACCGGACGTGGGAC CGGACGTGGGACCGGACGTGGGACCGGACGTGGAGATGGAGGCAGAGGCTTCGCAGGCGGAAGCTTGTGCAGCAA CCGAGCCAGAGCGGGCTGAAGGGCAAGACGGAGCAGGGTCTCGAAGGACGCAGATACCGCCCCTGCCTCTACTTG GGCCTTGACAGCAGACGGGCGGACGGGGGTGGGTTTCAGGCTTCCGAGAGTATGTAG |
Transcript | >Hirsu2|3675 ATGGATCAATACGATGAATCTCAACCGGTCGAGGGCACGCCGCAGCCATGGAATATCTACAACTTCTACGCTGCG CCCGCCAAGAGCGACCCTTGGGTTCCCCTTGGCGTCATCCCGCCCTCGGTGCCGGACGACCCACCCGGCCGTGCC GTGCCCTCGGAGCAGTTCGCCTCTCAGCCCAGCTTTCTCGACTGGAGGAGTACCGGCTCGCCGTCCGAATGCGCC ACACTACCCCAAGACTCGGGATACGGAAGCATCCGCCAATCGTACAGTATAGCGAGCGCCTCCGTCCACGGCGGC GACGACATGGTCCTGGACTCGCAAATGGGTCAGGTCATGGGCGAATGCCACATCAATAACCCCGAGGCATCACAG TTCGATCCGCAGCATCACCAGCCGGCGACTGGAAAGTACCGCTGCCCAGACTGCAGCACTTGGCTCAAGAGCCCA GGCGAGCTCAAAAAGCATACGCAGCGCCACATCAAGTCCTTCAAATGTCCCTATGTCGACTGCGCCAAGAGGCAG CGAGGATTTAGTACTGCGAATGATCTCGTGCGACACAAGAGATCGGTTCACGGCGATCACAGCCTGCCAGGCCGG TCTTTCGTCTGCCCTTACTGCGTGCCCGGGAGCAAGGGACCCAAGATATGGCCGAGGGCAGACAACTTTCGCTCT CACCTGTCCCGCTCACATAACCTGAAGCTCAAATCGGAAGATGACCATGGAAAATACATATTCCAGCCGCCATTG CGGAGGAACGATCTAGACGGTGTTGGCGACTCCCTCGAACTCGTCGATTCGAGGGCTCGGCCGATGAGTCTCCAA GAGTCTCCGGCTCTGTCGGAAGGCCCGCGTTGCGACGTCGGTCCGCACTTCTTCGGGGGCCAAATGGCGCAGCAG CAAACTGCGGAGCCGCCGACGGTAACTCGGCCGGACGTCAATCCCACGCTTTCCCGGCCACCCCGCAATGTGGCG GCCGAACCGGCGGTGGCCACGGTTGCGTCCCCGGCCAGTCAGGAGTCTCCATGCGTCCGGCCAGACGCCCTTAGC CGGCCCGTTGGCTTTGTCGTCGCCCGTACACAAGGCCAGACCCCTGTGCACACGCTGCATGCGCAGCCCGAGAAC GTTGTCCACCCTCGCGGCAGCCTCTCTCACCTTACTCACACCGATGGTGACCACGACGACAACAGCGACAGCAAT GATGGCAGCGACCTTTGTGACGACGATTGTGACGACGAAGACGACAACGACAATGATGATGATTGTGGCGACGGC CGCGGCGCTGGGCCCTATGCCTCTGCTCCCACATCCATGGACGCCGCACCACTCGGGCAATCGCAGTCAGCCACA GGCACAAAATGTGAAGAGACCTGGAATCTGGGCGCTTCAGATTGCACGATGCCATGGCTTGCCAGCTGGCACAAG CCTGGAGGCGATGAGAGTAGCCGCCTCCTGGGCGAGACGGGGCTAGAGGGAGAGCTCGAGGGTCAGTCCGACAAC GACGCAAGTCCAAGGGCTCATGTCGAGTGCCCAGAATGTGAAAAGATCTTCAGCCGGCGGTGCGAGCTCAAGAAA CACTTCAAACGGCACCTCAAACCTTACGGGTGCACGTTCAAAAGCTGTCTGAAGAGATTTGGAAGTAAGAACGAC TGGAAGAGGCACGAAAGCAGCCAACATTTCTTGCTCGAGAAATGGGACTGCGACGAGCCCAACTGCACCAAGATT TGCCAGCGTCGGGAAAGCTTCAAGAGCCACTTGCAAAGAGACCACAACATGAGCGACTCGGACAAGATTGACGAG AAACTGGAGACGTGCCGGCTGGGGCGCCACTGCGACCCGCGCTTCTGGTGCGGCTTTTGCGTCAAGATCATCCAA ATCGACATGAACGAAAAGGGGGGCAACTCTTGGACCAAGAGGTGCGACCACATCGACAACCACTTGTTTGGCAAG GAGGGTCTGCAGAAGAAGTCGATCAAAGACTGGATACACCAAGAAGACCAGCTAGAACATCCGGCCTCGACAACG GCGGGCGCCACGGATCCGCAGCCGGCCAACAGGACGGAGGCGGGCGATGGCGAAGGGCTGGAAAGAAAACGAAGA AGCAGCGGCGGCACCAGCTCTCGGCCTTGCAAGAGGGCCAGCAAGTCACAGGCAACAACATACATGTGGATATGC TGCATGTGCGCGGCGGAAATGGTGCTCAAGACGTCGTCCAGCTGCTTCGAGACGACGTGGGACCGGACGTGGGAC CGGACGTGGGACCGGACGTGGGACCGGACGTGGAGATGGAGGCAGAGGCTTCGCAGGCGGAAGCTTGTGCAGCAA CCGAGCCAGAGCGGGCTGAAGGGCAAGACGGAGCAGGGTCTCGAAGGACGCAGATACCGCCCCTGCCTCTACTTG GGCCTTGACAGCAGACGGGCGGACGGGGGTGGGTTTCAGGCTTCCGAGAGTATGTAG |
Gene | >Hirsu2|3675 ATGGATCAATACGATGAATCTCAACCGGTCGAGGGCACGCCGCAGCCATGGAATATCTACAACTTCTACGCTGCG CCCGCCAAGAGCGACCCTTGGGTTCCCCTTGGCGTCATCCCGCCCTCGGTGCCGGACGACCCACCCGGCCGTGCC GTGCCCTCGGAGCAGTTCGCCTCTCAGCCCAGCTTTCTCGACTGGAGGAGTACCGGCTCGCCGTCCGAATGCGCC ACACTACCCCAAGACTCGGGATACGGAAGCATCCGCCAATCGTACAGTATAGCGAGCGCCTCCGTCCACGGCGGC GACGACATGGTCCTGGACTCGCAAATGGGTCAGGTCATGGGCGAATGCCACATCAATAACCCCGAGGCATCACAG TTCGATCCGCAGCATCACCAGCCGGCGACTGGAAAGTACCGCTGCCCAGACTGCAGCACTTGGCTCAAGAGCCCA GGCGAGCTCAAGTAGGTTTCCGCTACCCGCCCCGCTCCGGGGCCTTTCACAGGCAAGCAGTCTATGGATCAAGGC TGACGCGCGTCAACAATCAAAAGAAAGCATACGCAGCGCCACATCAAGTCCTTCAAATGTCCCTATGTCGACTGC GCCAAGAGGCAGCGAGGATTTAGTACTGCGAATGATCTCGTGCGACACAAGAGATCGGTTCACGGCGATCACAGC CTGCCAGGCCGGTCTTTCGTCTGCCCTTACTGCGTGCCCGGGAGCAAGGGACCCAAGATATGGCCGAGGGCAGAC AACTTTCGCTCTCACCTGTCCCGCTCACATAACCTGAAGCTCAAATCGGAAGATGACCATGGAAAATACATATTC CAGTATGTTTGACCGCCACACAACTCCGGCTGTGGATCAGTTTGACAACTCTGCAGGCCGCCATTGCGGAGGAAC GATCTAGACGGTGTTGGCGACTCCCTCGAACTCGTCGATTCGAGGGCTCGGCCGATGAGTCTCCAAGAGTCTCCG GCTCTGTCGGAAGGCCCGCGTTGCGACGTCGGTCCGCACTTCTTCGGGGGCCAAATGGCGCAGCAGCAAACTGCG GAGCCGCCGACGGTAACTCGGCCGGACGTCAATCCCACGCTTTCCCGGCCACCCCGCAATGTGGCGGCCGAACCG GCGGTGGCCACGGTTGCGTCCCCGGCCAGTCAGGAGTCTCCATGCGTCCGGCCAGACGCCCTTAGCCGGCCCGTT GGCTTTGTCGTCGCCCGTACACAAGGCCAGACCCCTGTGCACACGCTGCATGCGCAGCCCGAGAACGTTGTCCAC CCTCGCGGCAGCCTCTCTCACCTTACTCACACCGATGGTGACCACGACGACAACAGCGACAGCAATGATGGCAGC GACCTTTGTGACGACGATTGTGACGACGAAGACGACAACGACAATGATGATGATTGTGGCGACGGCCGCGGCGCT GGGCCCTATGCCTCTGCTCCCACATCCATGGACGCCGCACCACTCGGGCAATCGCAGTCAGCCACAGGCACAAAA TGTGAAGAGACCTGGAATCTGGGCGCTTCAGATTGCAGTGAGTCCACCCAAGTAGGGCTTCGTGATCTCAGCGCC GACATGGTGGGCTCGCAGCGATGCCATGGCTTGCCAGCTGGCACAAGCCTGGAGGCGATGAGAGTAGCCGCCTCC TGTATGGAGCCTGGGCGCTCTGATAACATCATCAAGTTTCTCCAAAGTTTCCCTAAAGAGCTCCTTGAATCGGCA CTTAGGGGCGAGACGGGGCTAGAGGGAGAGCTCGAGGGTCAGTCCGACAACGACGCAAGTCCAAGGGCTCATGTC GAGTGCCCAGAATGTGAAAAGATCTTCAGCCGGCGGTGCGAGCTCAAGTAAGCCATGCTCACGACTCCCTCCGTC CCAGACGTCTGCGGGGGTCGTTTTTTTTTTTCGTCGCCGCTGACAGGTGTGCCGTCCAAGGAAACACTTCAAACG GCACCTCAAACCTTACGGGTGCACGTTCAAAAGCTGTCTGAAGAGATTTGGAAGTAAGAACGACTGGAAGAGGCA CGAAAGCAGCCAACATTTCTTGCTCGAGAAATGGGACTGCGACGAGCCCAACTGCACCAAGATTTGCCAGCGTCG GGAAAGCTTCAAGAGCCACTTGCAAAGAGACCACAACATGAGCGACTCGGACAAGATTGACGAGAAACTGGAGAC GTGCCGGCTGGGGCGCCACTGCGACCCGCGCTTCTGGTGCGGCTTTTGCGTCAAGATCATCCAAATCGACATGAA CGAAAAGGGGGGCAACTCTTGGACCAAGAGGTGCGACCACATCGACAACCACTTGTTTGGCAAGGAGGGTCTGCA GAAGAAGTCGATCAAAGACTGGATACACCAAGAAGACCAGCTAGAACATCCGGCCTCGACAACGGCGGGCGCCAC GGATCCGCAGCCGGCCAACAGGACGGAGGCGGGCGATGGCGAAGGGCTGGAAAGAAAACGAAGAAGCAGCGGCGG CACCAGCTCTCGGCCTTGCAAGAGGGCCAGCAAGTCACAGGCAACAACATACATGTGGATATGCGTAAGTTGTGA AGCATTTCTCGAGTCGTCTCCTCGTTTACCTGACGCTCATTATCACTATTCCCCCCGTTTACTCTCCTTCGGTCG GCTACGCACTTTTCCCCTCTGATTTCTCACCAACGTGTCGTATTGGATGGTGATGCGGACAAGGAGGCTCACACA GATGACAGTGCATGTGCGCGGCGGAAATGGTGCTCAAGACGTCGTCCAGCTGCTTCGAGTGCCATCATCCAAGAT GTTCGGCCGACTGCGAAGTGATAACGATTTCGCCACAGGACGACGTGGGACCGGACGTGGGACCGGACGTGGGAC CGGACGTGGGACCGGACGTGGAGATGGAGGCAGAGGCTTCGCAGGCGGAAGCTTGTGCAGCAACCGAGCCAGAGC GGGCTGAAGGGCAAGACGGAGCAGGGTCTCGAAGGACGCAGATACCGCCCCTGCCTCTACTTGGGCCTTGACAGC AGACGGGCGGACGGGGGTGGGTTTCAGGCTTCCGAGAGTATGTAG |