Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3672
Gene name
LocationContig_1989:532..1291
Strand-
Gene length (bp)759
Transcript length (bp)450
Coding sequence length (bp)450
Protein length (aa) 150

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10355 Ytp1 Protein of unknown function (Ytp1) 1.5E-53 2 123

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59714|YBH6_SCHPO Uncharacterized membrane protein C3B8.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B8.06 PE=1 SV=1 2 120 6.0E-33
sp|P25639|YCV1_YEAST Uncharacterized membrane protein YCR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR061W PE=1 SV=2 12 119 7.0E-29

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.0802 0.224 0.1561 0.2292 0.1491 0.0698 0.5611 0.5194 0.4836 0.0054

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 62 84 22
3 99 121 22
4 128 147 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2513
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1101
Ophiocordyceps australis map64 (Brazil) OphauB2|5437
Ophiocordyceps camponoti-floridani Ophcf2|00091
Ophiocordyceps camponoti-rufipedis Ophun1|179
Ophiocordyceps kimflemingae Ophio5|588
Ophiocordyceps subramaniannii Hirsu2|3672 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3672
MSGIATLGRFFEGEAIFSGLAHWIKGGVFFWLGLFTLGRWTGSFGDLGWAWNVRPQTKLRKWCPTAELVECALIF
SYGSTNIFLEHLGHWGGAWRPQDLEHVAITILFIGGGLCGMLVESCRDSRKAASPAWFTSSGAIYCWVLLVLEV*
Coding >Hirsu2|3672
ATGTCAGGAATTGCCACCCTCGGTCGCTTTTTTGAAGGCGAAGCGATTTTCAGCGGACTGGCACATTGGATCAAA
GGCGGTGTTTTTTTCTGGCTAGGCCTCTTTACTCTTGGCCGCTGGACGGGGAGCTTCGGAGACCTTGGCTGGGCC
TGGAACGTACGACCGCAAACGAAGCTGCGAAAATGGTGCCCTACGGCTGAACTGGTGGAGTGTGCTCTCATCTTC
TCCTACGGCTCCACCAATATCTTCCTCGAGCACCTCGGTCACTGGGGTGGGGCTTGGAGGCCCCAAGACCTGGAG
CATGTTGCCATCACAATCTTGTTTATCGGTGGCGGCCTGTGCGGCATGCTCGTAGAGTCGTGCCGCGACAGTCGC
AAAGCGGCATCTCCAGCATGGTTCACAAGCAGTGGGGCAATCTACTGCTGGGTGCTTCTTGTGCTCGAGGTCTGA
Transcript >Hirsu2|3672
ATGTCAGGAATTGCCACCCTCGGTCGCTTTTTTGAAGGCGAAGCGATTTTCAGCGGACTGGCACATTGGATCAAA
GGCGGTGTTTTTTTCTGGCTAGGCCTCTTTACTCTTGGCCGCTGGACGGGGAGCTTCGGAGACCTTGGCTGGGCC
TGGAACGTACGACCGCAAACGAAGCTGCGAAAATGGTGCCCTACGGCTGAACTGGTGGAGTGTGCTCTCATCTTC
TCCTACGGCTCCACCAATATCTTCCTCGAGCACCTCGGTCACTGGGGTGGGGCTTGGAGGCCCCAAGACCTGGAG
CATGTTGCCATCACAATCTTGTTTATCGGTGGCGGCCTGTGCGGCATGCTCGTAGAGTCGTGCCGCGACAGTCGC
AAAGCGGCATCTCCAGCATGGTTCACAAGCAGTGGGGCAATCTACTGCTGGGTGCTTCTTGTGCTCGAGGTCTGA
Gene >Hirsu2|3672
ATGTCAGGAATTGCCACCCTCGGTCGCTTTTTTGTAAGTTGACTACTGCAACTTCCTATAATGCAGCGCGTTCCG
CGTCCCGAGCTTATCTCTCACTGACCGCCCCCAGGAAGGCGAAGCGATTTTCAGCGGACTGGCACATTGGATCAA
AGGCGGTGTTTTTTTCTGGCTAGGCCTCTTTACTCTTGGCCGCTGGACGGGGAGCTTCGGAGACCTTGGCTGGGC
CTGGAACGTACGACCGCAAACGAAGCTGCGAAAATGGTGCCCTACGGCTGAACTGGTGGAGTGTGCTCTCATCTT
CTCCTACGGCTCCACCAATATCTTCCTCGAGCACCTCGGTCACTGGGGTGGGGCTTGGAGGCCCCAAGACCTGGA
GCATGTTGCCATCACAATCTTGTTTATCGGTGGCGGCCTGGTAAGCAGGATTCGTTGACCTCTTCAAGTTCAAGA
CTCGAAAATACGCATGCTAACTGACGGCTGCGGCATAGTGCGGCATGCTCGTAGAGTCGTGCCGCGTACGTGACT
TGCTTAATACCACTGTTTTGGAGGTATTGCCCGGCGGCGAATTGTCTGAGGAAGGACAGTCGCAAAGGTCTGTTC
CGGAAACTTACAAACTCTCCTTGAACCCCATTCCCGCACTCGTCATCTTGATGCTGGGCATTACTATGAGTTCTC
ACCAGCAGTCCAGCGGCATCTCCAGCATGGTTCACAAGCAGTGGGGCAATCTACTGCTGGGTGCTTCTTGTGCTC
GAGGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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