Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3670
Gene name
LocationContig_1987:2163..3930
Strand+
Gene length (bp)1767
Transcript length (bp)1515
Coding sequence length (bp)1515
Protein length (aa) 505

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13641 Glyco_tranf_2_3 Glycosyltransferase like family 2 1.1E-28 76 314
PF00535 Glycos_transf_2 Glycosyl transferase family 2 3.6E-07 78 248

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O00219|HYAS3_HUMAN Hyaluronan synthase 3 OS=Homo sapiens GN=HAS3 PE=2 SV=3 116 435 1.0E-07
sp|O08650|HYAS3_MOUSE Hyaluronan synthase 3 OS=Mus musculus GN=Has3 PE=1 SV=2 150 435 4.0E-07
sp|O57424|HYAS2_CHICK Hyaluronan synthase 2 OS=Gallus gallus GN=HAS2 PE=2 SV=2 110 435 3.0E-06
sp|O57427|HYAS2_XENLA Hyaluronan synthase 2 OS=Xenopus laevis GN=has2 PE=2 SV=2 142 435 7.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 26 45 19
2 339 361 22
3 376 398 22
4 405 427 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3670
MDDDAAAAAEWLTGIAGRLLASLPPLLSLRFSVTFWAYVFWVLWIHRYVRLIVHCVSHWAYKSKPLPESPEFTEE
DVTVVIPTIHNFFPDLEPSLSSILNCNPAKLILVTTSAKRDSLEDLAKSLSQRYPGRIRVLATDIANKRRQVCAA
LPEVATKITVMADDDVTWPRTMLPWILAPFQDASMGGVGTCQRVKRERSGPWATRAWNWLGAAYIERRNFEISAT
HNIDGGTSCMSGRTGAYRSSILQSPEFLEGFTNEKWRKWNLNADDDNFVTRWLVSNRWKTWIQYSHECELETTLE
NDHKFLYQCSRWARSNWRSNWTSLFRDRHVWRQQPWCTYALHIATFTSLAFAIDPLLLASCWWATGGWETRQRLC
AFWAQFVFMFAFTKVVKLMGLFVRNPGDLVFLPVSIAFGYFHGLIKLYALWTLNMTAWGSRADGDTHDRVRMSPA
QQSPTLKGPPGPDMTIPLYNTPGGRQASSRGGSAGSALEKHLGGHMPAAAFRQS*
Coding >Hirsu2|3670
ATGGACGACGACGCCGCCGCCGCCGCCGAATGGCTGACGGGCATCGCAGGCCGCCTGCTCGCCAGCCTGCCGCCC
CTCCTCAGCCTCCGCTTCTCCGTCACTTTCTGGGCCTACGTCTTCTGGGTCTTATGGATCCATCGCTACGTACGC
CTCATCGTCCACTGCGTCAGCCACTGGGCCTACAAGTCCAAGCCGCTGCCGGAGAGCCCCGAATTCACCGAAGAG
GACGTGACGGTCGTCATCCCGACCATCCACAACTTCTTCCCCGACCTGGAGCCGTCGCTCTCGAGCATCCTCAAC
TGCAACCCCGCCAAGCTGATCCTGGTGACGACGTCGGCCAAGCGCGACAGCCTCGAAGACCTGGCCAAGTCGCTG
TCGCAGCGGTACCCGGGCCGGATCCGCGTCCTCGCCACCGACATCGCCAACAAGAGGCGACAGGTCTGCGCGGCC
CTGCCCGAGGTCGCGACCAAGATCACCGTCATGGCCGACGACGACGTGACCTGGCCGCGGACCATGCTGCCCTGG
ATCCTGGCCCCCTTCCAAGACGCCAGCATGGGCGGCGTCGGGACGTGCCAGCGGGTCAAGCGCGAGCGCTCCGGG
CCCTGGGCCACCCGCGCCTGGAACTGGCTCGGGGCCGCCTACATCGAGCGGCGCAACTTTGAGATCTCGGCCACC
CACAACATCGACGGCGGCACCTCGTGCATGTCGGGCCGCACCGGCGCCTACCGATCCTCCATCCTGCAGAGCCCC
GAGTTCCTCGAGGGCTTCACCAACGAGAAGTGGCGCAAGTGGAACCTCAACGCCGATGACGACAACTTCGTCACC
CGCTGGCTCGTCAGCAACCGGTGGAAGACGTGGATCCAGTACAGCCACGAGTGCGAGCTCGAGACGACGCTCGAG
AACGACCACAAGTTTCTCTACCAGTGCTCCCGCTGGGCCCGGAGCAACTGGAGGAGCAACTGGACCAGCCTCTTC
CGCGACCGGCACGTGTGGAGGCAGCAACCATGGTGCACGTACGCGCTACACATTGCGACTTTCACCTCGCTCGCC
TTCGCCATAGACCCCCTGCTGCTGGCCTCGTGCTGGTGGGCGACGGGCGGGTGGGAGACGCGGCAGCGCCTCTGC
GCCTTCTGGGCCCAATTCGTCTTCATGTTCGCCTTCACCAAGGTGGTGAAGCTGATGGGGCTCTTCGTCCGCAAC
CCGGGCGACCTCGTCTTCCTGCCCGTCTCCATCGCCTTTGGCTACTTCCACGGCCTCATCAAGCTGTACGCGCTG
TGGACCTTGAACATGACAGCGTGGGGCAGCCGGGCCGATGGCGATACCCATGACCGTGTGCGGATGTCCCCTGCC
CAACAGTCCCCAACGCTCAAGGGACCCCCGGGTCCTGATATGACGATCCCGCTCTACAACACGCCGGGCGGGCGG
CAGGCGAGCAGCCGGGGCGGCAGTGCGGGGAGCGCCTTGGAGAAGCACCTTGGCGGCCACATGCCCGCGGCCGCC
TTTCGGCAAAGTTGA
Transcript >Hirsu2|3670
ATGGACGACGACGCCGCCGCCGCCGCCGAATGGCTGACGGGCATCGCAGGCCGCCTGCTCGCCAGCCTGCCGCCC
CTCCTCAGCCTCCGCTTCTCCGTCACTTTCTGGGCCTACGTCTTCTGGGTCTTATGGATCCATCGCTACGTACGC
CTCATCGTCCACTGCGTCAGCCACTGGGCCTACAAGTCCAAGCCGCTGCCGGAGAGCCCCGAATTCACCGAAGAG
GACGTGACGGTCGTCATCCCGACCATCCACAACTTCTTCCCCGACCTGGAGCCGTCGCTCTCGAGCATCCTCAAC
TGCAACCCCGCCAAGCTGATCCTGGTGACGACGTCGGCCAAGCGCGACAGCCTCGAAGACCTGGCCAAGTCGCTG
TCGCAGCGGTACCCGGGCCGGATCCGCGTCCTCGCCACCGACATCGCCAACAAGAGGCGACAGGTCTGCGCGGCC
CTGCCCGAGGTCGCGACCAAGATCACCGTCATGGCCGACGACGACGTGACCTGGCCGCGGACCATGCTGCCCTGG
ATCCTGGCCCCCTTCCAAGACGCCAGCATGGGCGGCGTCGGGACGTGCCAGCGGGTCAAGCGCGAGCGCTCCGGG
CCCTGGGCCACCCGCGCCTGGAACTGGCTCGGGGCCGCCTACATCGAGCGGCGCAACTTTGAGATCTCGGCCACC
CACAACATCGACGGCGGCACCTCGTGCATGTCGGGCCGCACCGGCGCCTACCGATCCTCCATCCTGCAGAGCCCC
GAGTTCCTCGAGGGCTTCACCAACGAGAAGTGGCGCAAGTGGAACCTCAACGCCGATGACGACAACTTCGTCACC
CGCTGGCTCGTCAGCAACCGGTGGAAGACGTGGATCCAGTACAGCCACGAGTGCGAGCTCGAGACGACGCTCGAG
AACGACCACAAGTTTCTCTACCAGTGCTCCCGCTGGGCCCGGAGCAACTGGAGGAGCAACTGGACCAGCCTCTTC
CGCGACCGGCACGTGTGGAGGCAGCAACCATGGTGCACGTACGCGCTACACATTGCGACTTTCACCTCGCTCGCC
TTCGCCATAGACCCCCTGCTGCTGGCCTCGTGCTGGTGGGCGACGGGCGGGTGGGAGACGCGGCAGCGCCTCTGC
GCCTTCTGGGCCCAATTCGTCTTCATGTTCGCCTTCACCAAGGTGGTGAAGCTGATGGGGCTCTTCGTCCGCAAC
CCGGGCGACCTCGTCTTCCTGCCCGTCTCCATCGCCTTTGGCTACTTCCACGGCCTCATCAAGCTGTACGCGCTG
TGGACCTTGAACATGACAGCGTGGGGCAGCCGGGCCGATGGCGATACCCATGACCGTGTGCGGATGTCCCCTGCC
CAACAGTCCCCAACGCTCAAGGGACCCCCGGGTCCTGATATGACGATCCCGCTCTACAACACGCCGGGCGGGCGG
CAGGCGAGCAGCCGGGGCGGCAGTGCGGGGAGCGCCTTGGAGAAGCACCTTGGCGGCCACATGCCCGCGGCCGCC
TTTCGGCAAAGTTGA
Gene >Hirsu2|3670
ATGGACGACGACGCCGCCGCCGCCGCCGAATGGCTGACGGGCATCGCAGGCCGCCTGCTCGCCAGCCTGCCGCCC
CTCCTCAGCCTCCGCTTCTCCGTCACTTTCTGGGCCTACGTCTTCTGGGTCTTATGGTGTGTTTCGAGACCTTGC
TTGACCTGGCCCCTGGTGGCCTGGCCCCCCCCCCCCCCCAGAGCGGCCACCGATTGGCCCGTGTTAACGCAATCT
TCAGGATCCATCGCTACGTACGCCTCATCGTCCACTGCGTCAGCCACTGGGCCTACAAGTCCAAGCCGCTGCCGG
AGAGCCCCGAATTCACCGAAGAGGACGTGACGGTCGTCATCCCGACCATCCACAACTTCTTCCCCGACCTGGAGC
CGTCGCTCTCGAGCATCCTCAACTGCAACCCCGCCAAGCTGATCCTGGTGACGACGTCGGCCAAGCGCGACAGCC
TCGAAGACCTGGCCAAGTCGCTGTCGCAGCGGTACCCGGGCCGGATCCGCGTCCTCGCCACCGACATCGCCAACA
AGAGGCGACAGGTCTGCGCGGCCCTGCCCGAGGTCGCGACCAAGATCACCGTCATGGCCGACGACGACGTGACCT
GGCCGCGGACCATGCTGCCCTGGATCCTGGCCCCCTTCCAAGACGCCAGCATGGGCGGCGTCGGGACGTGCCAGC
GGGTCAAGCGCGAGCGCTCCGGGCCCTGGGCCACCCGCGCCTGGAACTGGCTCGGGGCCGCCTACATCGAGCGGC
GCAACTTTGAGATCTCGGCCACCCACAACATCGACGGCGGCACCTCGTGCATGTCGGGCCGCACCGGCGCCTACC
GATCCTCCATCCTGCAGAGCCCCGAGTTCCTCGAGGGCTTCACCAACGAGAAGTGGCGCAAGTGGAACCTCAACG
CCGATGACGACAACTTCGTCACCCGCTGGCTCGTCAGCAACCGGTGGAAGACGTGGATCCAGTACAGCCACGAGT
GCGAGCTCGAGACGACGCTCGAGAACGACCACAAGTTTCTCTACCAGTGCTCCCGCTGGGCCCGGAGCAACTGGA
GGAGCAACTGGACCAGCCTCTTCCGCGACCGGCACGTGTGGAGGTATGTGTGTGCATCGCACGCGGATTGGGCGT
GTCCATGTCGGCGCTGACGCATCTCGCTCTACGTGCAGGCAGCAACCATGGTGCACGTACGCGCTACACATTGCG
ACTTTCACCTCGCTCGCCTTCGCCATAGACCCCCTGCTGCTGGCCTCGTGCTGGTGGGCGACGGGCGGGTGGGAG
ACGCGGCAGCGCCTCTGCGCCTTCTGGGCCCAATTCGTCTTCATGTTCGCCTTCACCAAGGTGGTGAAGCTGATG
GGGCTCTTCGTCCGCAACCCGGGCGACCTCGTCTTCCTGCCCGTCTCCATCGCCTTTGGCTACTTCCACGGCCTC
ATCAAGCTGTACGCGCTGTGGACCTTGAACATGGTATGTCGTCGGCGGAAACCCCCCGACTTGCCCTGCCCCCTT
TTTGCACCAGGCCGCCCAGCTGACCACCCACACCGGTGGCAGACAGCGTGGGGCAGCCGGGCCGATGGCGATACC
CATGACCGTGTGCGGATGTCCCCTGCCCAACAGTCCCCAACGCTCAAGGGACCCCCGGGTCCTGATATGACGATC
CCGCTCTACAACACGCCGGGCGGGCGGCAGGCGAGCAGCCGGGGCGGCAGTGCGGGGAGCGCCTTGGAGAAGCAC
CTTGGCGGCCACATGCCCGCGGCCGCCTTTCGGCAAAGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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