Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3669
Gene name
LocationContig_1986:1544..2221
Strand-
Gene length (bp)677
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.0913 0.9333 0.1259 0.0946 0.1235 0.0172 0.0242 0.0014 0.0132 0.001

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2511
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|324
Ophiocordyceps australis map64 (Brazil) OphauB2|3304
Ophiocordyceps camponoti-floridani Ophcf2|06700
Ophiocordyceps camponoti-rufipedis Ophun1|5049
Ophiocordyceps kimflemingae Ophio5|1560
Ophiocordyceps subramaniannii Hirsu2|3669 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3669
MSKQDSGEQVKFLVSCIRHASNGKPDFAAVAEQLGIVSKAAAQKRYERMLKAHGVNGSKAGANLKPADDAPTPQS
SPVKRKLAARRPARAAAAAKKPKKEPDEDGAEVKAEPKKNGAVAKEDDESELSDAPPSPSESET*
Coding >Hirsu2|3669
ATGTCGAAGCAGGACTCGGGCGAGCAGGTCAAGTTCCTGGTGTCGTGCATCCGCCACGCCAGCAACGGCAAGCCT
GACTTTGCTGCCGTTGCCGAGCAGCTCGGCATCGTGTCCAAGGCCGCTGCGCAGAAGCGCTACGAGAGGATGCTC
AAGGCCCACGGAGTCAACGGCTCCAAGGCCGGCGCCAACCTGAAGCCGGCCGACGACGCCCCGACGCCGCAGTCG
AGCCCCGTCAAGCGTAAGCTCGCCGCCCGTCGTCCGGCCCGCGCCGCCGCCGCGGCCAAGAAGCCCAAGAAGGAG
CCCGACGAGGACGGCGCCGAGGTCAAGGCTGAGCCGAAGAAGAACGGCGCCGTGGCCAAGGAGGACGATGAGTCC
GAGCTGAGCGATGCCCCTCCTTCGCCCTCCGAGTCCGAGACCTAG
Transcript >Hirsu2|3669
ATGTCGAAGCAGGACTCGGGCGAGCAGGTCAAGTTCCTGGTGTCGTGCATCCGCCACGCCAGCAACGGCAAGCCT
GACTTTGCTGCCGTTGCCGAGCAGCTCGGCATCGTGTCCAAGGCCGCTGCGCAGAAGCGCTACGAGAGGATGCTC
AAGGCCCACGGAGTCAACGGCTCCAAGGCCGGCGCCAACCTGAAGCCGGCCGACGACGCCCCGACGCCGCAGTCG
AGCCCCGTCAAGCGTAAGCTCGCCGCCCGTCGTCCGGCCCGCGCCGCCGCCGCGGCCAAGAAGCCCAAGAAGGAG
CCCGACGAGGACGGCGCCGAGGTCAAGGCTGAGCCGAAGAAGAACGGCGCCGTGGCCAAGGAGGACGATGAGTCC
GAGCTGAGCGATGCCCCTCCTTCGCCCTCCGAGTCCGAGACCTAG
Gene >Hirsu2|3669
ATGTCGAAGCAGGACTCGGGCGAGCAGGTCAAGTTCCTGGTGTCGTGCATCCGCCACGCCAGCAACGGCAAGGTA
TGTCGCGCCACGGCTTCCAAAGAGAGAGGGGGAAGAAAAAAGAGCAGACAGACTGATGATCTCCGTTCGTCGTCC
TAGCCTGACTTTGCTGCCGTTGCCGAGCAGCTCGGCATCGTGTCCAAGGCCGCTGCGTGAGTCCCCCCACATCTC
CCTTCTCCCGCGCTTTTGTTTGAAATTCCCTCGCGGCGCCGCTGACGGCGAAGCAGGCAGAAGCGCTACGAGAGG
ATGCTCAAGGCCCACGGAGTCAACGGCTCCAAGGCCGGCGCCAACCTGAAGCCGGCCGACGACGCCCCGACGCCG
CAGTCGAGCCCCGTCAAGCGTAAGCTCGCCGCCCGTCGTCCGGCCCGCGCCGCCGCCGCGGCCAAGAAGCCCAAG
AAGGAGCCCGACGAGGACGGCGCCGAGGTCAAGGCTGAGCCGAAGAAGAACGGCGCCGTGGCCAAGGAGGACGAT
GAGTCCGAGCTGAGCGGTACGCGCCCTCTTTCCCCATCCTTTTCCTTTTTGGGGGGCCCTTCCTGTCTGTGTCGC
TGGCGACTACGTGAGCTTGGGAACTGACCAAGACCGCCGCAGATGCCCCTCCTTCGCCCTCCGAGTCCGAGACCT
AG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail