Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3662
Gene name
LocationContig_198:27676..28608
Strand+
Gene length (bp)932
Transcript length (bp)771
Coding sequence length (bp)771
Protein length (aa) 257

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01652 IF4E Eukaryotic initiation factor 4E 1.2E-53 54 236

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P78954|IF4E1_SCHPO Eukaryotic translation initiation factor 4E-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif451 PE=3 SV=1 41 253 8.0E-72
sp|Q9P975|IF4E_CANAL Eukaryotic translation initiation factor 4E OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TIF45 PE=3 SV=1 22 247 1.0E-62
sp|O74743|IF4E2_SCHPO Eukaryotic translation initiation factor 4E-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif452 PE=3 SV=1 7 253 3.0E-62
sp|Q75AV8|IF4E_ASHGO Eukaryotic translation initiation factor 4E OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TIF45 PE=3 SV=2 41 242 2.0E-56
sp|Q9P974|IF4E_CANGA Eukaryotic translation initiation factor 4E OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TIF45 PE=3 SV=2 37 248 8.0E-55
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Swissprot ID Swissprot Description Start End E-value
sp|P78954|IF4E1_SCHPO Eukaryotic translation initiation factor 4E-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif451 PE=3 SV=1 41 253 8.0E-72
sp|Q9P975|IF4E_CANAL Eukaryotic translation initiation factor 4E OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TIF45 PE=3 SV=1 22 247 1.0E-62
sp|O74743|IF4E2_SCHPO Eukaryotic translation initiation factor 4E-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif452 PE=3 SV=1 7 253 3.0E-62
sp|Q75AV8|IF4E_ASHGO Eukaryotic translation initiation factor 4E OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TIF45 PE=3 SV=2 41 242 2.0E-56
sp|Q9P974|IF4E_CANGA Eukaryotic translation initiation factor 4E OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TIF45 PE=3 SV=2 37 248 8.0E-55
sp|P07260|IF4E_YEAST Eukaryotic translation initiation factor 4E OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC33 PE=1 SV=1 39 242 8.0E-53
sp|O77210|IF4E_APLCA Eukaryotic translation initiation factor 4E OS=Aplysia californica PE=1 SV=1 51 256 1.0E-39
sp|P48598|IF4E_DROME Eukaryotic translation initiation factor 4E OS=Drosophila melanogaster GN=eIF-4E PE=1 SV=1 24 255 3.0E-39
sp|P48597|IF4E_XENLA Eukaryotic translation initiation factor 4E OS=Xenopus laevis GN=eif4e PE=1 SV=1 51 256 1.0E-38
sp|Q9DFS6|IF4EA_DANRE Eukaryotic translation initiation factor 4E-1A OS=Danio rerio GN=eif4e1a PE=1 SV=1 51 256 1.0E-38
sp|P06730|IF4E_HUMAN Eukaryotic translation initiation factor 4E OS=Homo sapiens GN=EIF4E PE=1 SV=2 51 256 4.0E-38
sp|Q9N0T5|IF4E_BOVIN Eukaryotic translation initiation factor 4E OS=Bos taurus GN=EIF4E PE=2 SV=2 51 256 8.0E-38
sp|P29338|IF4E_RABIT Eukaryotic translation initiation factor 4E OS=Oryctolagus cuniculus GN=EIF4E PE=1 SV=1 51 256 1.0E-37
sp|P63074|IF4E_RAT Eukaryotic translation initiation factor 4E OS=Rattus norvegicus GN=Eif4e PE=1 SV=1 51 256 2.0E-37
sp|P63073|IF4E_MOUSE Eukaryotic translation initiation factor 4E OS=Mus musculus GN=Eif4e PE=1 SV=1 51 256 2.0E-37
sp|Q55FE0|IF4E_DICDI Eukaryotic translation initiation factor 4E OS=Dictyostelium discoideum GN=eif4e PE=3 SV=1 51 246 5.0E-37
sp|A6NMX2|I4E1B_HUMAN Eukaryotic translation initiation factor 4E type 1B OS=Homo sapiens GN=EIF4E1B PE=3 SV=3 53 256 7.0E-37
sp|Q9PW28|IF4EB_DANRE Eukaryotic translation initiation factor 4E-1B OS=Danio rerio GN=eif4e1b PE=2 SV=1 51 256 1.0E-35
sp|O04663|IF4E4_ARATH Eukaryotic translation initiation factor isoform 4E OS=Arabidopsis thaliana GN=EIF(ISO)4E PE=1 SV=2 53 248 5.0E-34
sp|O61955|IF4E3_CAEEL Eukaryotic translation initiation factor 4E-3 OS=Caenorhabditis elegans GN=ife-3 PE=1 SV=2 22 255 4.0E-32
sp|Q3UTA9|I4E1B_MOUSE Eukaryotic translation initiation factor 4E type 1B OS=Mus musculus GN=Eif4e1b PE=2 SV=1 53 250 3.0E-31
sp|Q03389|IF4E2_WHEAT Eukaryotic translation initiation factor isoform 4E-2 OS=Triticum aestivum PE=1 SV=1 53 249 1.0E-30
sp|O81482|IF4E2_MAIZE Eukaryotic translation initiation factor isoform 4E-2 OS=Zea mays PE=2 SV=1 53 249 8.0E-30
sp|P48600|IF4E2_ORYSJ Eukaryotic translation initiation factor isoform 4E-2 OS=Oryza sativa subsp. japonica GN=Os10g0467600 PE=2 SV=2 53 249 1.0E-29
sp|O23252|IF4E1_ARATH Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=1 SV=1 53 256 2.0E-29
sp|O81481|IF4E1_MAIZE Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1 53 242 9.0E-29
sp|P29557|IF4E1_WHEAT Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3 53 245 2.0E-28
sp|Q9C7P6|IF4E3_ARATH Eukaryotic translation initiation factor 4E-3 OS=Arabidopsis thaliana GN=EIF4E3 PE=1 SV=1 12 255 5.0E-27
sp|O45551|IF4E1_CAEEL Eukaryotic translation initiation factor 4E-1 OS=Caenorhabditis elegans GN=ife-1 PE=1 SV=2 53 253 1.0E-25
sp|P48599|IF4E1_ORYSJ Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1 55 242 2.0E-25
sp|A3RCV9|IF4E3_WHEAT Eukaryotic translation initiation factor NCBP OS=Triticum aestivum GN=NCBP PE=2 SV=1 53 248 5.0E-25
sp|Q9C7P2|IF4E2_ARATH Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2 53 256 1.0E-24
sp|Q10NQ9|IF4E3_ORYSJ Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica GN=NCBP PE=2 SV=1 53 248 2.0E-24
sp|P56570|IF4E5_CAEEL Eukaryotic translation initiation factor 4E-5 OS=Caenorhabditis elegans GN=ife-5 PE=1 SV=2 53 254 3.0E-24
sp|Q21693|IF4E2_CAEEL Eukaryotic translation initiation factor 4E-2 OS=Caenorhabditis elegans GN=ife-2 PE=1 SV=1 51 254 1.0E-23
sp|Q9FK59|IF4E5_ARATH Eukaryotic translation initiation factor NCBP OS=Arabidopsis thaliana GN=NCBP PE=2 SV=1 53 248 6.0E-23
sp|Q66HY7|IF4E3_DANRE Eukaryotic translation initiation factor 4E type 3 OS=Danio rerio GN=eif4e3 PE=2 SV=1 54 238 4.0E-21
sp|Q8BMB3|IF4E2_MOUSE Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1 51 242 5.0E-21
sp|O60573|IF4E2_HUMAN Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1 51 242 7.0E-21
sp|Q9DBB5|IF4E3_MOUSE Eukaryotic translation initiation factor 4E type 3 OS=Mus musculus GN=Eif4e3 PE=1 SV=1 54 238 2.0E-20
sp|Q8N5X7|IF4E3_HUMAN Eukaryotic translation initiation factor 4E type 3 OS=Homo sapiens GN=EIF4E3 PE=2 SV=4 54 238 2.0E-20
sp|Q22888|IF4E4_CAEEL Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1 53 248 2.0E-18
sp|Q6NU27|I4E3B_XENLA Eukaryotic translation initiation factor 4E type 3-B OS=Xenopus laevis GN=eif4e3-b PE=2 SV=1 54 238 2.0E-18
sp|Q28ET8|IF4E3_XENTR Eukaryotic translation initiation factor 4E type 3 OS=Xenopus tropicalis GN=eif4e3 PE=2 SV=1 54 238 5.0E-18
sp|Q6GR08|I4E3A_XENLA Eukaryotic translation initiation factor 4E type 3-A OS=Xenopus laevis GN=eif4e3-a PE=2 SV=1 54 238 3.0E-17
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GO

GO Term Description Terminal node
GO:0006413 translational initiation Yes
GO:0003723 RNA binding Yes
GO:0003743 translation initiation factor activity Yes
GO:0008135 translation factor activity, RNA binding No
GO:0008152 metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0009987 cellular process No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0090079 translation regulator activity, nucleic acid binding No
GO:0045182 translation regulator activity No
GO:0044237 cellular metabolic process No
GO:0008150 biological_process No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6091 0.2224 0.0432 0.1344 0.1333 0.0083 0.0577 0.05 0.0433 0.0019

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2506
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5650
Ophiocordyceps australis map64 (Brazil) OphauB2|7886
Ophiocordyceps camponoti-floridani Ophcf2|01034
Ophiocordyceps camponoti-rufipedis Ophun1|6085
Ophiocordyceps kimflemingae Ophio5|2728
Ophiocordyceps subramaniannii Hirsu2|3662 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3662
MAAAATDTSKLDQQVDLSTIPISPDGKEETADASAGDKPVTVFHDKDNFNVKHPLQNKWTLWFTKPPSGKGDNWN
DLLKEVITFDSVEEFWGVYNNVAPVSELPQKADYHLFKASVRPEWEDPQNKHGGKWSYQYKDKRNVDVDRLWLQV
MMGAIGETLEDEDDGEVMGVVVNVRKAFYRIGVWTRTIGKSIPGRGDGDVAGGKGRTGEKGKEVLMSIGRRFKEI
LELPSGEQVEFSGHTDSAHSGSTRAKAKYVA*
Coding >Hirsu2|3662
ATGGCGGCCGCGGCGACCGATACGTCCAAGCTCGACCAGCAGGTCGACCTGTCCACGATCCCCATTTCCCCGGAC
GGCAAGGAGGAGACTGCTGATGCCAGCGCCGGCGACAAGCCTGTCACTGTCTTTCACGACAAGGACAACTTCAAC
GTCAAACATCCCCTTCAGAACAAGTGGACCCTCTGGTTCACCAAGCCCCCGAGCGGCAAGGGCGACAACTGGAAT
GACCTCCTCAAGGAGGTCATCACCTTCGACTCGGTCGAGGAGTTTTGGGGGGTTTACAACAATGTCGCACCCGTG
TCCGAGCTGCCCCAGAAGGCCGACTACCACCTCTTCAAGGCTAGCGTGCGCCCCGAATGGGAGGATCCCCAGAAC
AAGCACGGCGGCAAGTGGTCCTACCAGTACAAGGACAAGCGGAACGTCGACGTCGACCGCCTCTGGCTGCAGGTG
ATGATGGGCGCTATTGGCGAAACACTCGAGGACGAGGACGACGGCGAGGTCATGGGCGTCGTCGTCAACGTGCGC
AAGGCCTTTTACCGCATCGGCGTCTGGACTCGCACCATCGGCAAGAGCATTCCGGGCCGAGGCGACGGCGACGTC
GCCGGTGGCAAGGGACGCACCGGCGAGAAGGGCAAGGAGGTGCTCATGTCGATTGGCCGGCGGTTCAAGGAGATC
CTGGAGCTGCCCAGCGGCGAGCAGGTCGAGTTCTCGGGCCACACCGACAGCGCCCACTCGGGCAGCACGAGGGCC
AAGGCCAAGTACGTGGCATAG
Transcript >Hirsu2|3662
ATGGCGGCCGCGGCGACCGATACGTCCAAGCTCGACCAGCAGGTCGACCTGTCCACGATCCCCATTTCCCCGGAC
GGCAAGGAGGAGACTGCTGATGCCAGCGCCGGCGACAAGCCTGTCACTGTCTTTCACGACAAGGACAACTTCAAC
GTCAAACATCCCCTTCAGAACAAGTGGACCCTCTGGTTCACCAAGCCCCCGAGCGGCAAGGGCGACAACTGGAAT
GACCTCCTCAAGGAGGTCATCACCTTCGACTCGGTCGAGGAGTTTTGGGGGGTTTACAACAATGTCGCACCCGTG
TCCGAGCTGCCCCAGAAGGCCGACTACCACCTCTTCAAGGCTAGCGTGCGCCCCGAATGGGAGGATCCCCAGAAC
AAGCACGGCGGCAAGTGGTCCTACCAGTACAAGGACAAGCGGAACGTCGACGTCGACCGCCTCTGGCTGCAGGTG
ATGATGGGCGCTATTGGCGAAACACTCGAGGACGAGGACGACGGCGAGGTCATGGGCGTCGTCGTCAACGTGCGC
AAGGCCTTTTACCGCATCGGCGTCTGGACTCGCACCATCGGCAAGAGCATTCCGGGCCGAGGCGACGGCGACGTC
GCCGGTGGCAAGGGACGCACCGGCGAGAAGGGCAAGGAGGTGCTCATGTCGATTGGCCGGCGGTTCAAGGAGATC
CTGGAGCTGCCCAGCGGCGAGCAGGTCGAGTTCTCGGGCCACACCGACAGCGCCCACTCGGGCAGCACGAGGGCC
AAGGCCAAGTACGTGGCATAG
Gene >Hirsu2|3662
ATGGCGGCCGCGGCGACCGATACGTCCAAGCTCGACCAGCAGGTCGACCTGTCCACGATCCCCATTTCCCCGGAC
GGCAAGGAGGAGACTGCTGATGCCAGCGCCGGCGACAAGCCTGTCACTGTCTTTCACGACAAGGACAACTTCAAC
GTCAAACATCCCCTTCAGAACAAGTGGACCCTCTGGTTCACCAAGCCCCCGAGCGGCAAGGTACGATCGGCTCGC
CCAGAACCCGGCCTCACGGCCGACATGTGGCTGACCTTGGCTCTCCGTTCAAGGGCGACAACTGGAATGACCTCC
TCAAGGAGGTCATCACCTTCGACTCGGTCGAGGAGTTTTGGGGGGTTTACGTAAGTCCGCCCCCGGGCTGTCTCG
CCCACCTACCTGCTTCTGCCCACGGCCGGCCCAGACAAGTCGGGTCCTGACGGCTTCGCACCTCGCAGAACAATG
TCGCACCCGTGTCCGAGCTGCCCCAGAAGGCCGACTACCACCTCTTCAAGGCTAGCGTGCGCCCCGAATGGGAGG
ATCCCCAGAACAAGCACGGCGGCAAGTGGTCCTACCAGTACAAGGACAAGCGGAACGTCGACGTCGACCGCCTCT
GGCTGCAGGTGATGATGGGCGCTATTGGCGAAACACTCGAGGACGAGGACGACGGCGAGGTCATGGGCGTCGTCG
TCAACGTGCGCAAGGCCTTTTACCGCATCGGCGTCTGGACTCGCACCATCGGCAAGAGCATTCCGGGCCGAGGCG
ACGGCGACGTCGCCGGTGGCAAGGGACGCACCGGCGAGAAGGGCAAGGAGGTGCTCATGTCGATTGGCCGGCGGT
TCAAGGAGATCCTGGAGCTGCCCAGCGGCGAGCAGGTCGAGTTCTCGGGCCACACCGACAGCGCCCACTCGGGCA
GCACGAGGGCCAAGGCCAAGTACGTGGCATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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