© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3648 |
| Gene name | |
| Location | Contig_1976:2349..3023 |
| Strand | - |
| Gene length (bp) | 674 |
| Transcript length (bp) | 537 |
| Coding sequence length (bp) | 537 |
| Protein length (aa) | 179 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1708 | 0.1032 | 0.9414 | 0.0599 | 0.1047 | 0.0375 | 0.1485 | 0.176 | 0.1222 | 0.0228 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999737 |
| Orthofinder run ID | 4 |
| Orthogroup | 7010 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|05529 |
| Ophiocordyceps camponoti-rufipedis | Ophun1|3780 |
| Ophiocordyceps subramaniannii | Hirsu2|3648 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3648 MKLLVSVVPALVGLATAASQAADCAVRKCDLRCPFECIHAQGRQIADLNSRQVCVVVTSAPTVLERCLKTCGDIT QHETVDTDTGETVDTDTEEAVDTDTEAVDMGTEEAAAAADTGTEEAEAAAGMDTDMTTMRLNGAGLRTFTLVDFS HTRPPLRDDELRRQTELVASASTNLADG* |
| Coding | >Hirsu2|3648 ATGAAGCTCCTCGTCTCCGTCGTCCCCGCCCTCGTCGGCCTCGCAACGGCCGCCTCGCAGGCCGCCGACTGTGCG GTGCGCAAGTGCGACCTGCGCTGCCCGTTTGAGTGCATCCACGCGCAGGGCAGGCAGATCGCGGACCTCAACTCC CGGCAGGTCTGCGTCGTGGTCACGTCGGCGCCGACCGTGCTCGAAAGGTGTCTCAAGACGTGCGGAGACATCACC CAGCACGAGACGGTGGACACGGACACGGGGGAGACGGTGGACACGGACACGGAGGAGGCGGTGGACACGGACACG GAGGCGGTGGACATGGGCACGGAGGAGGCGGCGGCGGCGGCGGACACGGGCACGGAGGAGGCGGAGGCGGCGGCG GGCATGGACACGGACATGACAACTATGAGGCTTAACGGGGCTGGCCTGAGGACCTTCACTCTGGTCGATTTCTCC CACACGAGGCCTCCTCTACGAGACGACGAGCTTAGACGCCAGACGGAACTGGTAGCAAGCGCATCGACGAACTTG GCTGACGGGTAA |
| Transcript | >Hirsu2|3648 ATGAAGCTCCTCGTCTCCGTCGTCCCCGCCCTCGTCGGCCTCGCAACGGCCGCCTCGCAGGCCGCCGACTGTGCG GTGCGCAAGTGCGACCTGCGCTGCCCGTTTGAGTGCATCCACGCGCAGGGCAGGCAGATCGCGGACCTCAACTCC CGGCAGGTCTGCGTCGTGGTCACGTCGGCGCCGACCGTGCTCGAAAGGTGTCTCAAGACGTGCGGAGACATCACC CAGCACGAGACGGTGGACACGGACACGGGGGAGACGGTGGACACGGACACGGAGGAGGCGGTGGACACGGACACG GAGGCGGTGGACATGGGCACGGAGGAGGCGGCGGCGGCGGCGGACACGGGCACGGAGGAGGCGGAGGCGGCGGCG GGCATGGACACGGACATGACAACTATGAGGCTTAACGGGGCTGGCCTGAGGACCTTCACTCTGGTCGATTTCTCC CACACGAGGCCTCCTCTACGAGACGACGAGCTTAGACGCCAGACGGAACTGGTAGCAAGCGCATCGACGAACTTG GCTGACGGGTAA |
| Gene | >Hirsu2|3648 ATGAAGCTCCTCGTCTCCGTCGTCCCCGCCCTCGTCGGCCTCGCAACGGCCGCCTCGCAGGCCGCCGACTGTGCG GTGCGCAAGTGCGACCTGCGCTGCCCGTTTGAGTGCATCCACGCGCAGGGCAGGCAGATCGCGGACCTCAACTCC CGGCAGGTCTGCGTCGTGGTCACGTCGGCGCCGACCGTGCTCGAAAGGTGTCTCAAGACGTGCGGAGGTAGGAGA TGCCCGCTGCTGGTGCTGCTGGCTGGCTTGTTGTGTCTGCTGGCTGACCGAGGATACGTGCGGGATAGACATCAC CCAGCACGAGGTCCAGAAGCTTCTGGGGTGCGGGGAGGGGATAGGGGGTGGTGGACACGGACACGGGGGAGACGG TGGACACGGACACGGGGGAGACGGTGGACACGGACACGGAGGAGGCGGTGGACACGGACACGGAGGCGGTGGACA TGGGCACGGAGGAGGCGGCGGCGGCGGCGGACACGGGCACGGAGGAGGCGGAGGCGGCGGCGGGCATGGACACGG ACATGACAACTATGAGGCTTAACGGGGCTGGCCTGAGGACCTTCACTCTGGTCGATTTCTCCCACACGAGGCCTC CTCTACGAGACGACGAGCTTAGACGCCAGACGGAACTGGTAGCAAGCGCATCGACGAACTTGGCTGACGGGTAA |