© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3646 |
| Gene name | |
| Location | Contig_1973:47..1998 |
| Strand | - |
| Gene length (bp) | 1951 |
| Transcript length (bp) | 1713 |
| Coding sequence length (bp) | 1713 |
| Protein length (aa) | 571 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.4735 | 0.5199 | 0.5594 | 0.1026 | 0.2502 | 0.1096 | 0.1446 | 0.0588 | 0.1619 | 0.0112 |
| Orthofinder run ID | 4 |
| Orthogroup | 9392 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3646 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3646 MLMPPARYPDTVLNRRIQRRPCSGMCSGRGALRTRYLTTATGARRRRWPVAPPAKGARMGVGLRHGPAGASGTRL FWPLSGRRSPGAYLHRRDPASTDRRRQHSLPLSLSLSPSLSLSAGDDTGHEHVSPAWRLHYAARRLKKIRRLDGA AGGAAGGAAAAAEKARTRLGHQGILSRPAGAYTVPGKRGHGAAQRRPCTHSQASSALSLLHRRLSLSVTQLFFFF FIFFPTFFAPPSWPSGLARRCDLGGGSIGRSPSRPTPWRPVRPARLRFAAPSARRRRQRAYRLRPACSHRPTDRR AGGTVRAPGRAHGAIRSSVTSPASKRRASLSRPRPWPWGGQAELRFPGRGPRIGCDARRPYRKTLAWPRPWCCPP VPKQADAAAASALIAQASATVGFERARDEAKPSTTGSPPSAQAARPRGNCSTTASASCESPSGLALNPRRRAKPC APAALTTAPFSTVRRPVLGRRRRCLTGWPTPCQPALSAGREASPLDSATPSGQRHRRWTKATLRDPDVIWPPLAA TSPLTGHASSPFAAFGHLRVEWRRLPPLCLASPGAGTATAPRRAW* |
| Coding | >Hirsu2|3646 ATGCTTATGCCGCCTGCACGCTACCCAGACACTGTGCTCAACCGCCGAATCCAGCGGCGGCCATGCTCTGGCATG TGCTCGGGACGGGGGGCCCTGCGTACTCGGTACTTGACCACAGCCACGGGTGCACGGCGACGACGATGGCCTGTG GCACCGCCGGCCAAGGGGGCACGAATGGGTGTAGGGCTTAGGCACGGCCCAGCGGGCGCAAGTGGCACTCGGCTA TTCTGGCCACTCAGCGGTCGCCGTTCGCCGGGCGCGTATCTGCACCGGCGCGATCCAGCCTCGACCGACCGACGC CGGCAGCATTCTCTCCCTCTCTCCCTCTCCCTCTCCCCCTCTCTCTCTCTCTCCGCCGGTGACGACACCGGACAC GAGCACGTGTCTCCGGCATGGCGACTACATTACGCCGCCAGACGCCTGAAGAAGATTCGCCGGCTGGATGGAGCA GCAGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGCAGAAAAAGCCCGTACGCGCCTCGGCCATCAGGGTATCCTG TCGCGCCCGGCCGGCGCCTATACCGTGCCTGGTAAGAGAGGGCACGGTGCTGCGCAGAGGCGGCCATGCACACAC TCCCAAGCCTCTTCCGCCCTCAGCCTGCTGCATCGCCGCCTCTCTCTCTCGGTCACACAGCTTTTTTTTTTTTTT TTCATCTTCTTCCCTACCTTCTTTGCGCCCCCCTCTTGGCCGTCCGGTCTGGCCCGTCGGTGCGACCTGGGCGGA GGGAGCATCGGACGCAGTCCCTCTCGGCCAACGCCCTGGCGCCCCGTCCGTCCCGCCCGTCTCCGGTTCGCGGCT CCCTCCGCGCGCCGGCGTCGACAGAGGGCATACCGCCTTCGGCCAGCCTGCTCGCACCGTCCCACGGATCGCAGG GCCGGTGGTACGGTGCGAGCCCCGGGCCGGGCTCACGGTGCGATCCGGAGCTCCGTTACATCGCCCGCGTCCAAA CGCCGAGCCAGCCTATCACGACCCCGGCCCTGGCCCTGGGGGGGGCAGGCCGAGCTCCGCTTCCCTGGCCGCGGC CCTCGCATCGGCTGCGACGCACGTCGTCCGTACCGGAAAACGCTGGCCTGGCCCCGTCCTTGGTGTTGCCCACCA GTCCCGAAACAAGCTGATGCTGCAGCTGCGTCTGCATTGATTGCACAGGCCAGTGCTACCGTCGGCTTCGAGCGA GCCAGGGACGAGGCCAAGCCAAGCACGACCGGTTCGCCGCCGTCGGCACAGGCCGCCCGGCCACGGGGAAATTGC TCGACAACCGCATCTGCCTCGTGCGAATCGCCATCTGGCCTTGCTCTCAACCCGCGGCGCCGGGCCAAGCCCTGC GCGCCCGCCGCCCTCACAACCGCCCCCTTCTCGACCGTCCGCCGGCCTGTTCTGGGCCGCCGCCGCCGATGCCTG ACAGGCTGGCCGACTCCCTGCCAGCCTGCGCTGTCGGCCGGTCGGGAAGCGAGCCCTCTCGACTCTGCCACGCCG TCGGGCCAGAGACACAGACGATGGACGAAGGCAACGCTCCGGGATCCCGACGTCATCTGGCCCCCATTGGCCGCC ACCAGTCCCCTCACCGGCCATGCCTCCTCCCCCTTCGCCGCCTTTGGGCATCTCCGCGTCGAGTGGCGACGACTG CCTCCGCTCTGTCTCGCCTCGCCGGGCGCCGGCACGGCAACGGCGCCGAGACGTGCTTGGTGA |
| Transcript | >Hirsu2|3646 ATGCTTATGCCGCCTGCACGCTACCCAGACACTGTGCTCAACCGCCGAATCCAGCGGCGGCCATGCTCTGGCATG TGCTCGGGACGGGGGGCCCTGCGTACTCGGTACTTGACCACAGCCACGGGTGCACGGCGACGACGATGGCCTGTG GCACCGCCGGCCAAGGGGGCACGAATGGGTGTAGGGCTTAGGCACGGCCCAGCGGGCGCAAGTGGCACTCGGCTA TTCTGGCCACTCAGCGGTCGCCGTTCGCCGGGCGCGTATCTGCACCGGCGCGATCCAGCCTCGACCGACCGACGC CGGCAGCATTCTCTCCCTCTCTCCCTCTCCCTCTCCCCCTCTCTCTCTCTCTCCGCCGGTGACGACACCGGACAC GAGCACGTGTCTCCGGCATGGCGACTACATTACGCCGCCAGACGCCTGAAGAAGATTCGCCGGCTGGATGGAGCA GCAGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGCAGAAAAAGCCCGTACGCGCCTCGGCCATCAGGGTATCCTG TCGCGCCCGGCCGGCGCCTATACCGTGCCTGGTAAGAGAGGGCACGGTGCTGCGCAGAGGCGGCCATGCACACAC TCCCAAGCCTCTTCCGCCCTCAGCCTGCTGCATCGCCGCCTCTCTCTCTCGGTCACACAGCTTTTTTTTTTTTTT TTCATCTTCTTCCCTACCTTCTTTGCGCCCCCCTCTTGGCCGTCCGGTCTGGCCCGTCGGTGCGACCTGGGCGGA GGGAGCATCGGACGCAGTCCCTCTCGGCCAACGCCCTGGCGCCCCGTCCGTCCCGCCCGTCTCCGGTTCGCGGCT CCCTCCGCGCGCCGGCGTCGACAGAGGGCATACCGCCTTCGGCCAGCCTGCTCGCACCGTCCCACGGATCGCAGG GCCGGTGGTACGGTGCGAGCCCCGGGCCGGGCTCACGGTGCGATCCGGAGCTCCGTTACATCGCCCGCGTCCAAA CGCCGAGCCAGCCTATCACGACCCCGGCCCTGGCCCTGGGGGGGGCAGGCCGAGCTCCGCTTCCCTGGCCGCGGC CCTCGCATCGGCTGCGACGCACGTCGTCCGTACCGGAAAACGCTGGCCTGGCCCCGTCCTTGGTGTTGCCCACCA GTCCCGAAACAAGCTGATGCTGCAGCTGCGTCTGCATTGATTGCACAGGCCAGTGCTACCGTCGGCTTCGAGCGA GCCAGGGACGAGGCCAAGCCAAGCACGACCGGTTCGCCGCCGTCGGCACAGGCCGCCCGGCCACGGGGAAATTGC TCGACAACCGCATCTGCCTCGTGCGAATCGCCATCTGGCCTTGCTCTCAACCCGCGGCGCCGGGCCAAGCCCTGC GCGCCCGCCGCCCTCACAACCGCCCCCTTCTCGACCGTCCGCCGGCCTGTTCTGGGCCGCCGCCGCCGATGCCTG ACAGGCTGGCCGACTCCCTGCCAGCCTGCGCTGTCGGCCGGTCGGGAAGCGAGCCCTCTCGACTCTGCCACGCCG TCGGGCCAGAGACACAGACGATGGACGAAGGCAACGCTCCGGGATCCCGACGTCATCTGGCCCCCATTGGCCGCC ACCAGTCCCCTCACCGGCCATGCCTCCTCCCCCTTCGCCGCCTTTGGGCATCTCCGCGTCGAGTGGCGACGACTG CCTCCGCTCTGTCTCGCCTCGCCGGGCGCCGGCACGGCAACGGCGCCGAGACGTGCTTGGTGA |
| Gene | >Hirsu2|3646 ATGCTTATGCCGCCTGCACGCTACCCAGACACTGTGCTCAACCGCCGAATCCAGCGGCGGCCATGCTCTGGCATG TGCTCGGGACGGGGGGCCCTGCGTACTCGGTACTTGACCACAGCCACGGGTGCACGGCGACGACGATGGCCTGTG GCACCGCCGGCCAAGGGGGCACGAATGGGTGTAGGGCTTAGGCACGGCCCAGCGGGCGCAAGTGGCACTCGGCTA TTCTGGCCACTCAGCGGTCGCCGTTCGCCGGGCGCGTATCTGCACCGGCGCGATCCAGCCTCGACCGACCGACGC CGGCAGCATTCTCTCCCTCTCTCCCTCTCCCTCTCCCCCTCTCTCTCTCTCTCCGCCGGTGACGACACCGGACAC GAGCACGTGTCTCCGGCATGGCGACTACATGTATGTGTACATGCTGTCAATGCCTGCGATCCCATTTGCCCGCGT GGGCATCCGGTGTGCGTCCAAGGACCGACATCCATGCTTATAGGAGCCAGGCTGGTCTGCGCACTACATACACGT GCATGCGCTGTGCCCTCTACATGTACACAGTACGCCGCCAGACGCCTGAAGAAGATTCGCCGGCTGGATGGAGCA GCAGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGCAGAAAAAGCCCGTACGCGCCTCGGCCATCAGGGTATCCTG TCGCGCCCGGCCGGCGCCTATACCGTGCCTGGTAAGAGAGGGCACGGTGCTGCGCAGAGGCGGCCATGCACACAC TCCCAAGCCTCTTCCGCCCTCAGCCTGCTGCATCGCCGCCTCTCTCTCTCGGTCACACAGCTTTTTTTTTTTTTT TTCATCTTCTTCCCTACCTTCTTTGCGCCCCCCTCTTGGCCGTCCGGTCTGGCCCGTCGGTGCGACCTGGGCGGA GGGAGCATCGGACGCAGTCCCTCTCGGCCAACGCCCTGGCGCCCCGTCCGTCCCGCCCGTCTCCGGTTCGCGGCT CCCTCCGCGCGCCGGCGTCGACAGAGGGCATACCGCCTTCGGCCAGCCTGCTCGCACCGTCCCACGGATCGCAGG GCCGGTGGTACGGTGCGAGCCCCGGGCCGGGCTCACGGTGCGATCCGGAGCTCCGTTACATCGCCCGCGTCCAAA CGCCGAGCCAGCCTATCACGACCCCGGCCCTGGCCCTGGGGGGGGCAGGCCGAGCTCCGCTTCCCTGGCCGCGGC CCTCGCATCGGCTGCGACGCACGTCGTCCGTACCGGAAAACGCTGGCCTGGCCCCGTCCTTGGTGTTGCCCACCA GTCCCGAAACAAGCTGATGCTGCAGCTGCGTCTGCATTGATTGCACAGTACGCTTGTGTGGAACGGCCGGCCATC GATCGGCCTCGCTCACAAGCGCAGAGAAGCCGCCCCGAAAATATAGGGGGACCGTCCAAGGGCCAGTGCTACCGT CGGCTTCGAGCGAGCCAGGGACGAGGCCAAGCCAAGCACGACCGGTTCGCCGCCGTCGGCACAGGCCGCCCGGCC ACGGGGAAATTGCTCGACAACCGCATCTGCCTCGTGCGAATCGCCATCTGGCCTTGCTCTCAACCCGCGGCGCCG GGCCAAGCCCTGCGCGCCCGCCGCCCTCACAACCGCCCCCTTCTCGACCGTCCGCCGGCCTGTTCTGGGCCGCCG CCGCCGATGCCTGACAGGCTGGCCGACTCCCTGCCAGCCTGCGCTGTCGGCCGGTCGGGAAGCGAGCCCTCTCGA CTCTGCCACGCCGTCGGGCCAGAGACACAGACGATGGACGAAGGCAACGCTCCGGGATCCCGACGTCATCTGGCC CCCATTGGCCGCCACCAGTCCCCTCACCGGCCATGCCTCCTCCCCCTTCGCCGCCTTTGGGCATCTCCGCGTCGA GTGGCGACGACTGCCTCCGCTCTGTCTCGCCTCGCCGGGCGCCGGCACGGCAACGGCGCCGAGACGTGCTTGGTG A |