Protein ID | Hirsu2|3644 |
Gene name | |
Location | Contig_1972:893..2676 |
Strand | - |
Gene length (bp) | 1783 |
Transcript length (bp) | 1656 |
Coding sequence length (bp) | 1656 |
Protein length (aa) | 552 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00026 | Asp | Eukaryotic aspartyl protease | 4.3E-06 | 181 | 398 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 454 | 476 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3644 MMRRLLRLALFMSRLVAASPCRRQLLQLPIKDVRVYPDVAHSFMTGIPAKIGTPPQDVVLLPWPELNNTWLYDQQ VPCDKTVVWNERMCNVRRGHPFDQDKSTSFHRAADIAAAGGAAVETSYEGAENGIPKLTGSGLAGTDTFALEGAE ALKDFPIGIARLPWDHGYTVLHPLGLGSNSTYLNALRQAGKIPSRVFSIFWGRMWTDNPVDGAVVLGGYDEAKTI GEPFTAPLEYGDFGASSSGCWTGMKVRITDIQLNKRDGSDVSIMPANTDVPACIVPQRQNLMELPQSVVTKFEDV TGTKSNGTSDGLHWGARLFGSDSVFDGDLTIVLASGLKVRVPNSQFITPHLAMDSDGARILDRTKRDLLINGLGS QPATLGRYFLTSAYLMVDHDAKSFTLWRANPSTSSRLESVTHEGTASQCDDGRSVLQPSSPASAPVDSAGQPSAA VRGGAVAGGVVGASLLGLAAFLLLTWKRRRMRMRSRKANGDVAPQEVAAAHTEPKPAQLASAPHASTEHPAQGPH GSQATLEMRGQVYEMGGEDGNRATGR* |
Coding | >Hirsu2|3644 ATGATGCGCCGTCTCTTGCGCCTGGCCCTGTTCATGTCCAGGCTCGTGGCCGCCTCGCCATGCCGCCGACAGCTG CTCCAACTGCCCATCAAGGACGTTCGAGTGTATCCGGACGTCGCCCACTCGTTCATGACGGGCATTCCCGCCAAG ATCGGCACCCCTCCGCAGGACGTGGTGCTGCTTCCCTGGCCCGAGCTCAACAACACCTGGCTCTACGACCAACAG GTGCCGTGCGACAAGACGGTCGTCTGGAACGAACGCATGTGCAATGTTCGGAGAGGCCATCCCTTCGACCAGGAC AAGTCGACGAGCTTCCACAGGGCCGCTGATATTGCGGCCGCCGGCGGCGCAGCCGTAGAGACCAGCTATGAGGGT GCCGAAAACGGCATCCCAAAGCTCACCGGCTCCGGCCTCGCTGGCACCGACACCTTCGCCCTCGAGGGCGCCGAG GCCTTGAAAGACTTCCCCATCGGCATTGCGCGTCTGCCGTGGGATCACGGCTACACAGTCCTCCACCCGCTCGGT CTGGGCTCCAACTCGACCTACCTCAACGCCCTCCGCCAGGCCGGCAAGATTCCCTCACGCGTCTTCTCCATCTTT TGGGGCCGCATGTGGACCGACAATCCCGTCGACGGGGCCGTCGTCTTGGGCGGCTACGACGAAGCGAAGACGATA GGCGAGCCTTTCACCGCCCCGCTTGAATACGGCGACTTCGGCGCCTCCTCCTCGGGCTGCTGGACGGGCATGAAG GTCCGGATCACGGACATCCAGCTGAACAAGCGCGACGGCTCCGATGTCAGTATCATGCCGGCTAATACCGACGTG CCGGCTTGCATCGTGCCACAGAGGCAGAACTTGATGGAGCTGCCGCAGTCCGTCGTGACCAAGTTCGAGGACGTC ACCGGCACCAAGAGCAACGGGACGTCGGACGGCCTGCATTGGGGGGCCAGACTGTTCGGCTCAGACAGTGTCTTC GACGGCGACCTGACCATTGTGCTCGCCTCGGGCCTCAAGGTCCGCGTCCCGAACAGCCAGTTCATCACGCCGCAT CTCGCCATGGATAGCGACGGGGCGCGCATCCTGGACAGGACCAAGCGCGATCTTCTCATCAACGGCCTCGGCAGT CAGCCTGCCACCCTGGGGCGATACTTCCTGACGTCGGCCTATCTCATGGTCGACCACGACGCAAAGTCCTTTACG CTCTGGCGAGCGAACCCGTCGACTTCTTCCAGGCTGGAGTCGGTGACGCACGAGGGCACGGCCAGCCAGTGCGAC GACGGTAGAAGCGTGCTGCAGCCGTCGTCCCCGGCGTCTGCGCCTGTAGACTCTGCGGGCCAGCCCTCGGCAGCC GTGCGAGGCGGCGCCGTCGCCGGCGGCGTGGTCGGCGCGTCCCTCCTAGGCCTGGCCGCCTTCTTGCTGCTGACT TGGAAGCGGAGGAGGATGAGAATGAGGAGCCGAAAGGCGAACGGTGACGTTGCTCCCCAGGAGGTAGCCGCCGCC CACACCGAGCCGAAGCCTGCGCAGCTCGCCTCAGCGCCGCACGCAAGCACCGAGCACCCAGCGCAGGGCCCACAT GGATCGCAGGCGACGCTGGAGATGCGCGGCCAGGTGTATGAGATGGGTGGCGAAGACGGGAATCGGGCAACCGGT CGTTAG |
Transcript | >Hirsu2|3644 ATGATGCGCCGTCTCTTGCGCCTGGCCCTGTTCATGTCCAGGCTCGTGGCCGCCTCGCCATGCCGCCGACAGCTG CTCCAACTGCCCATCAAGGACGTTCGAGTGTATCCGGACGTCGCCCACTCGTTCATGACGGGCATTCCCGCCAAG ATCGGCACCCCTCCGCAGGACGTGGTGCTGCTTCCCTGGCCCGAGCTCAACAACACCTGGCTCTACGACCAACAG GTGCCGTGCGACAAGACGGTCGTCTGGAACGAACGCATGTGCAATGTTCGGAGAGGCCATCCCTTCGACCAGGAC AAGTCGACGAGCTTCCACAGGGCCGCTGATATTGCGGCCGCCGGCGGCGCAGCCGTAGAGACCAGCTATGAGGGT GCCGAAAACGGCATCCCAAAGCTCACCGGCTCCGGCCTCGCTGGCACCGACACCTTCGCCCTCGAGGGCGCCGAG GCCTTGAAAGACTTCCCCATCGGCATTGCGCGTCTGCCGTGGGATCACGGCTACACAGTCCTCCACCCGCTCGGT CTGGGCTCCAACTCGACCTACCTCAACGCCCTCCGCCAGGCCGGCAAGATTCCCTCACGCGTCTTCTCCATCTTT TGGGGCCGCATGTGGACCGACAATCCCGTCGACGGGGCCGTCGTCTTGGGCGGCTACGACGAAGCGAAGACGATA GGCGAGCCTTTCACCGCCCCGCTTGAATACGGCGACTTCGGCGCCTCCTCCTCGGGCTGCTGGACGGGCATGAAG GTCCGGATCACGGACATCCAGCTGAACAAGCGCGACGGCTCCGATGTCAGTATCATGCCGGCTAATACCGACGTG CCGGCTTGCATCGTGCCACAGAGGCAGAACTTGATGGAGCTGCCGCAGTCCGTCGTGACCAAGTTCGAGGACGTC ACCGGCACCAAGAGCAACGGGACGTCGGACGGCCTGCATTGGGGGGCCAGACTGTTCGGCTCAGACAGTGTCTTC GACGGCGACCTGACCATTGTGCTCGCCTCGGGCCTCAAGGTCCGCGTCCCGAACAGCCAGTTCATCACGCCGCAT CTCGCCATGGATAGCGACGGGGCGCGCATCCTGGACAGGACCAAGCGCGATCTTCTCATCAACGGCCTCGGCAGT CAGCCTGCCACCCTGGGGCGATACTTCCTGACGTCGGCCTATCTCATGGTCGACCACGACGCAAAGTCCTTTACG CTCTGGCGAGCGAACCCGTCGACTTCTTCCAGGCTGGAGTCGGTGACGCACGAGGGCACGGCCAGCCAGTGCGAC GACGGTAGAAGCGTGCTGCAGCCGTCGTCCCCGGCGTCTGCGCCTGTAGACTCTGCGGGCCAGCCCTCGGCAGCC GTGCGAGGCGGCGCCGTCGCCGGCGGCGTGGTCGGCGCGTCCCTCCTAGGCCTGGCCGCCTTCTTGCTGCTGACT TGGAAGCGGAGGAGGATGAGAATGAGGAGCCGAAAGGCGAACGGTGACGTTGCTCCCCAGGAGGTAGCCGCCGCC CACACCGAGCCGAAGCCTGCGCAGCTCGCCTCAGCGCCGCACGCAAGCACCGAGCACCCAGCGCAGGGCCCACAT GGATCGCAGGCGACGCTGGAGATGCGCGGCCAGGTGTATGAGATGGGTGGCGAAGACGGGAATCGGGCAACCGGT CGTTAG |
Gene | >Hirsu2|3644 ATGATGCGCCGTCTCTTGCGCCTGGCCCTGTTCATGTCCAGGCTCGTGGCCGCCTCGCCATGCCGCCGACAGCTG CTCCAACTGCCCATCAAGGACGTTCGAGTGTATCCGGACGTCGCCCACTCGTTCATGACGGGCATTCCCGCCAAG ATCGGCACCCCTCCGCAGGACGTGGTGCTGCTTCCCTGGCCGTGAGTCGGCTTCGTGCCTCGGGAGCGGGCCATC GGCCTCGACTGATGGTTTCTGCCCTGCCAGCGAGCTCAACAACACCTGGCTCTACGACCAACAGGTGCCGTGCGA CAAGACGGTCGTCTGGAACGAACGCATGTGCAATGTTCGGAGAGGCCATCCCTTCGACCAGGACAAGTCGACGAG CTTCCACAGGGCCGCTGATATTGCGGCCGCCGGCGGCGCAGCCGTAGAGACCAGCTATGAGGGTGCCGAAAACGG CATCCCAAAGCTCACCGGCTCCGGCCTCGCTGGCACCGACACCTTCGCCCTCGAGGGCGCCGAGGCCTTGAAAGA CTTCCCCATCGGCATTGCGCGTCTGCCGTGGGATCACGGCTACACAGTCCTCCACCCGCTCGGTCTGGGCTCCAA CTCGACCTACCTCAACGCCCTCCGCCAGGCCGGCAAGATTCCCTCACGCGTCTTCTCCATCTTTTGGGGCCGCAT GTGGACCGACAATCCCGTCGACGGGGCCGTCGTCTTGGGCGGCTACGACGAAGCGAAGACGATAGGCGAGCCTTT CACCGCCCCGCTTGAATACGGCGACTTCGGCGCCTCCTCCTCGGGCTGCTGGACGGGCATGAAGGTCCGGATCAC GGACATCCAGCTGAACAAGCGCGACGGCTCCGATGTCAGTATCATGCCGGCTAATACCGACGTGCCGGCTTGCAT CGTGCCACAGAGGCAGAACTTGATGGAGCTGCCGCAGTCCGTCGTGACCAAGTTCGAGGACGTCACCGGCACCAA GAGCAACGGGACGTCGGACGGCCTGCATTGGGGGGCCAGACTGTTCGGCTCAGACAGTGTGTGGGTCGACGCCGT TCAACGAACCTGGCAGCGAGAGGAAGCGCTGACCGATGCCTTATCCAGCTTCGACGGCGACCTGACCATTGTGCT CGCCTCGGGCCTCAAGGTCCGCGTCCCGAACAGCCAGTTCATCACGCCGCATCTCGCCATGGATAGCGACGGGGC GCGCATCCTGGACAGGACCAAGCGCGATCTTCTCATCAACGGCCTCGGCAGTCAGCCTGCCACCCTGGGGCGATA CTTCCTGACGTCGGCCTATCTCATGGTCGACCACGACGCAAAGTCCTTTACGCTCTGGCGAGCGAACCCGTCGAC TTCTTCCAGGCTGGAGTCGGTGACGCACGAGGGCACGGCCAGCCAGTGCGACGACGGTAGAAGCGTGCTGCAGCC GTCGTCCCCGGCGTCTGCGCCTGTAGACTCTGCGGGCCAGCCCTCGGCAGCCGTGCGAGGCGGCGCCGTCGCCGG CGGCGTGGTCGGCGCGTCCCTCCTAGGCCTGGCCGCCTTCTTGCTGCTGACTTGGAAGCGGAGGAGGATGAGAAT GAGGAGCCGAAAGGCGAACGGTGACGTTGCTCCCCAGGAGGTAGCCGCCGCCCACACCGAGCCGAAGCCTGCGCA GCTCGCCTCAGCGCCGCACGCAAGCACCGAGCACCCAGCGCAGGGCCCACATGGATCGCAGGCGACGCTGGAGAT GCGCGGCCAGGTGTATGAGATGGGTGGCGAAGACGGGAATCGGGCAACCGGTCGTTAG |