Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3641
Gene name
LocationContig_1970:742..2671
Strand-
Gene length (bp)1929
Transcript length (bp)1398
Coding sequence length (bp)1398
Protein length (aa) 466

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00996 GDI GDP dissociation inhibitor 5.0E-193 6 453

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P39958|GDI1_YEAST Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDI1 PE=1 SV=1 2 457 0.0E+00
sp|Q10305|GDI1_SCHPO Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gdi1 PE=3 SV=1 6 450 3.0E-180
sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1 6 456 5.0E-168
sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1 6 456 3.0E-167
sp|O97555|GDIA_CANLF Rab GDP dissociation inhibitor alpha OS=Canis lupus familiaris GN=GDI1 PE=2 SV=1 6 456 3.0E-167
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Swissprot ID Swissprot Description Start End E-value
sp|P39958|GDI1_YEAST Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDI1 PE=1 SV=1 2 457 0.0E+00
sp|Q10305|GDI1_SCHPO Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gdi1 PE=3 SV=1 6 450 3.0E-180
sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1 6 456 5.0E-168
sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1 6 456 3.0E-167
sp|O97555|GDIA_CANLF Rab GDP dissociation inhibitor alpha OS=Canis lupus familiaris GN=GDI1 PE=2 SV=1 6 456 3.0E-167
sp|Q8HXX7|GDIA_MACFA Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1 PE=2 SV=1 6 456 3.0E-167
sp|P60028|GDIA_PANTR Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1 6 456 3.0E-167
sp|P31150|GDIA_HUMAN Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1 SV=2 6 456 3.0E-167
sp|P21856|GDIA_BOVIN Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1 6 456 6.0E-167
sp|P50396|GDIA_MOUSE Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3 6 456 1.0E-166
sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2 6 456 1.0E-164
sp|P50399|GDIB_RAT Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2 6 456 2.0E-164
sp|Q61598|GDIB_MOUSE Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1 6 456 2.0E-164
sp|Q5RCE1|GDIB_PONAB Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2 SV=1 6 456 5.0E-164
sp|P50397|GDIB_BOVIN Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3 6 456 2.0E-162
sp|O97556|GDIB_CANLF Rab GDP dissociation inhibitor beta OS=Canis lupus familiaris GN=GDI2 PE=2 SV=1 6 456 5.0E-162
sp|Q6Q7J2|GDIB_PIG Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1 6 456 2.0E-160
sp|Q96254|GDI1_ARATH Guanosine nucleotide diphosphate dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1 6 465 4.0E-149
sp|Q9LXC0|GDI_ARATH Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 OS=Arabidopsis thaliana GN=At5g09550 PE=3 SV=1 6 465 8.0E-149
sp|O24653|GDI2_ARATH Guanosine nucleotide diphosphate dissociation inhibitor 2 OS=Arabidopsis thaliana GN=GDI2 PE=2 SV=1 6 452 7.0E-146
sp|Q9V8W3|RABEP_DROME Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1 1 378 9.0E-33
sp|P32864|RAEP_YEAST Rab proteins geranylgeranyltransferase component A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRS6 PE=1 SV=2 9 374 4.0E-28
sp|P26374|RAE2_HUMAN Rab proteins geranylgeranyltransferase component A 2 OS=Homo sapiens GN=CHML PE=1 SV=2 70 385 5.0E-25
sp|Q9QZD5|RAE2_MOUSE Rab proteins geranylgeranyltransferase component A 2 OS=Mus musculus GN=Chml PE=2 SV=2 77 385 7.0E-24
sp|P24386|RAE1_HUMAN Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3 70 385 1.0E-22
sp|Q9QXG2|RAE1_MOUSE Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=1 SV=1 70 385 5.0E-22
sp|P37727|RAE1_RAT Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1 70 385 5.0E-22
sp|O93831|RAEP_CANAX Rab proteins geranylgeranyltransferase component A OS=Candida albicans GN=MRS6 PE=3 SV=1 9 393 3.0E-21
sp|O60112|YG63_SCHPO Uncharacterized Rab geranylgeranyltransferase C15C4.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.03 PE=3 SV=1 8 269 2.0E-17
sp|Q9QZD5|RAE2_MOUSE Rab proteins geranylgeranyltransferase component A 2 OS=Mus musculus GN=Chml PE=2 SV=2 2 66 2.0E-07
sp|P24386|RAE1_HUMAN Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3 4 66 9.0E-07
sp|P26374|RAE2_HUMAN Rab proteins geranylgeranyltransferase component A 2 OS=Homo sapiens GN=CHML PE=1 SV=2 2 66 1.0E-06
sp|Q9QXG2|RAE1_MOUSE Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=1 SV=1 2 66 3.0E-06
sp|P37727|RAE1_RAT Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1 2 66 3.0E-06
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GO

GO Term Description Terminal node
GO:0007264 small GTPase mediated signal transduction Yes
GO:0005092 GDP-dissociation inhibitor activity Yes
GO:0050789 regulation of biological process No
GO:0009987 cellular process No
GO:0007165 signal transduction No
GO:0060589 nucleoside-triphosphatase regulator activity No
GO:0030695 GTPase regulator activity No
GO:0098772 molecular function regulator activity No
GO:0008150 biological_process No
GO:0030234 enzyme regulator activity No
GO:0065007 biological regulation No
GO:0003674 molecular_function No
GO:0050794 regulation of cellular process No
GO:0035556 intracellular signal transduction No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear export signal 0.7728 0.3704 0.0657 0.0587 0.1748 0.0128 0.089 0.1685 0.2101 0.0031

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2504
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6110
Ophiocordyceps australis map64 (Brazil) OphauB2|3551
Ophiocordyceps camponoti-floridani Ophcf2|04166
Ophiocordyceps camponoti-rufipedis Ophun1|1299
Ophiocordyceps kimflemingae Ophio5|6251
Ophiocordyceps subramaniannii Hirsu2|3641 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3641
MEEIAKEYDVIVLGTGLTECILSGVLSVKGKKVLHIDRNNHYGGEAASVNLETLFKKYGNFQKGEEPWKKYGRPN
DWNIDLIPKFLMSSGELTNILVSTDVTRYLEFKQVAGSFVQQGSGPKATVAKVPSDAAEALKSPLMGIFEKRRMK
SFIEWVGTFDLKDPATHKGLDLNTCTMRDVYDKFGLEASTKDFTGHAMALYLTDDYINAKGQAPEAIERIRLYGN
SVARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTNVDELLYDGERAVGIKATMTTGADDMKFETKAKMIL
GDPSYFPAKTRAIGHVLRAICILKHPLAGTNDSDSCQLIIPQSQVGRKNDIYIACVSSAHNVCPKGYWIAIVSTI
AESSANHHLELQPGLDRLGAIEEQFMGPPIPMYEPVEDGTKDHIFMSKSYDATSHFETTTDDVKDIYRRCTGEEL
KVEGLREGITVAAEQ*
Coding >Hirsu2|3641
ATGGAGGAGATTGCTAAGGAGTACGACGTCATTGTGCTCGGCACCGGCCTGACCGAGTGCATCCTCTCCGGTGTC
CTGAGCGTCAAGGGCAAGAAGGTGCTGCACATCGACCGAAACAATCACTACGGCGGAGAGGCCGCCTCCGTGAAT
CTCGAAACGCTCTTCAAGAAATATGGCAACTTCCAAAAAGGCGAGGAGCCGTGGAAGAAATACGGCCGCCCCAAC
GACTGGAACATCGACCTGATCCCCAAGTTCCTCATGTCGTCGGGCGAGCTGACCAACATCCTCGTCTCCACCGAC
GTCACCCGCTACCTCGAGTTCAAGCAGGTCGCCGGCAGCTTCGTCCAGCAGGGCTCCGGGCCCAAGGCCACCGTC
GCCAAGGTGCCCTCGGACGCGGCCGAGGCCCTCAAGTCGCCCCTCATGGGCATCTTCGAGAAGCGCCGGATGAAG
TCCTTCATCGAGTGGGTCGGCACCTTTGACCTCAAGGACCCGGCCACCCACAAGGGCCTCGACCTCAACACGTGC
ACCATGCGCGACGTCTACGACAAGTTCGGCCTCGAGGCCTCCACCAAGGACTTCACCGGCCACGCCATGGCCCTC
TACCTCACCGACGACTACATCAACGCCAAGGGCCAGGCCCCCGAGGCCATCGAGCGCATCCGCCTCTACGGCAAC
TCCGTCGCCCGCTACGGCAAGTCGCCCTACATCTACCCGCTCTACGGCCTCGGCGAGCTGCCCCAGGGCTTCGCC
CGCCTGTCCGCCATCTACGGCGGCACCTACATGCTCAACACCAACGTCGACGAGCTGCTCTACGACGGCGAACGC
GCCGTCGGCATCAAGGCCACCATGACCACCGGCGCCGACGACATGAAGTTCGAGACCAAGGCCAAGATGATCCTC
GGCGACCCCTCCTACTTCCCCGCCAAGACCAGGGCCATCGGCCACGTCCTGCGCGCCATCTGCATCCTTAAGCAC
CCCCTGGCCGGCACCAACGACAGCGACTCGTGCCAGCTCATCATCCCCCAGTCGCAGGTCGGCCGCAAGAACGAC
ATCTACATCGCCTGCGTCTCCTCGGCCCACAACGTCTGCCCCAAGGGCTACTGGATCGCCATCGTGTCGACCATT
GCCGAGTCGTCGGCCAACCACCACCTCGAGCTGCAGCCCGGCCTGGACCGCCTGGGCGCCATCGAGGAGCAGTTT
ATGGGCCCGCCCATCCCCATGTACGAGCCGGTCGAGGACGGCACCAAGGACCACATCTTCATGTCCAAGAGCTAC
GACGCCACCAGCCACTTCGAGACGACGACGGACGACGTCAAGGACATCTACCGCCGCTGCACCGGCGAGGAGCTC
AAGGTCGAGGGCCTGAGAGAGGGCATCACCGTCGCGGCGGAGCAATGA
Transcript >Hirsu2|3641
ATGGAGGAGATTGCTAAGGAGTACGACGTCATTGTGCTCGGCACCGGCCTGACCGAGTGCATCCTCTCCGGTGTC
CTGAGCGTCAAGGGCAAGAAGGTGCTGCACATCGACCGAAACAATCACTACGGCGGAGAGGCCGCCTCCGTGAAT
CTCGAAACGCTCTTCAAGAAATATGGCAACTTCCAAAAAGGCGAGGAGCCGTGGAAGAAATACGGCCGCCCCAAC
GACTGGAACATCGACCTGATCCCCAAGTTCCTCATGTCGTCGGGCGAGCTGACCAACATCCTCGTCTCCACCGAC
GTCACCCGCTACCTCGAGTTCAAGCAGGTCGCCGGCAGCTTCGTCCAGCAGGGCTCCGGGCCCAAGGCCACCGTC
GCCAAGGTGCCCTCGGACGCGGCCGAGGCCCTCAAGTCGCCCCTCATGGGCATCTTCGAGAAGCGCCGGATGAAG
TCCTTCATCGAGTGGGTCGGCACCTTTGACCTCAAGGACCCGGCCACCCACAAGGGCCTCGACCTCAACACGTGC
ACCATGCGCGACGTCTACGACAAGTTCGGCCTCGAGGCCTCCACCAAGGACTTCACCGGCCACGCCATGGCCCTC
TACCTCACCGACGACTACATCAACGCCAAGGGCCAGGCCCCCGAGGCCATCGAGCGCATCCGCCTCTACGGCAAC
TCCGTCGCCCGCTACGGCAAGTCGCCCTACATCTACCCGCTCTACGGCCTCGGCGAGCTGCCCCAGGGCTTCGCC
CGCCTGTCCGCCATCTACGGCGGCACCTACATGCTCAACACCAACGTCGACGAGCTGCTCTACGACGGCGAACGC
GCCGTCGGCATCAAGGCCACCATGACCACCGGCGCCGACGACATGAAGTTCGAGACCAAGGCCAAGATGATCCTC
GGCGACCCCTCCTACTTCCCCGCCAAGACCAGGGCCATCGGCCACGTCCTGCGCGCCATCTGCATCCTTAAGCAC
CCCCTGGCCGGCACCAACGACAGCGACTCGTGCCAGCTCATCATCCCCCAGTCGCAGGTCGGCCGCAAGAACGAC
ATCTACATCGCCTGCGTCTCCTCGGCCCACAACGTCTGCCCCAAGGGCTACTGGATCGCCATCGTGTCGACCATT
GCCGAGTCGTCGGCCAACCACCACCTCGAGCTGCAGCCCGGCCTGGACCGCCTGGGCGCCATCGAGGAGCAGTTT
ATGGGCCCGCCCATCCCCATGTACGAGCCGGTCGAGGACGGCACCAAGGACCACATCTTCATGTCCAAGAGCTAC
GACGCCACCAGCCACTTCGAGACGACGACGGACGACGTCAAGGACATCTACCGCCGCTGCACCGGCGAGGAGCTC
AAGGTCGAGGGCCTGAGAGAGGGCATCACCGTCGCGGCGGAGCAATGA
Gene >Hirsu2|3641
ATGGAGGAGATTGCTAAGGAGTACGACGTCATTGTGCTCGGCACCGGTGCGTCTTGGTGCCCCCTCTCGAGAGAC
TCGCGCTGATCATCCTCGTCGCCAGGCCTGACCGAGTGCATCCTCTCCGGGTACGACGCGAGCCCTCGGCTGCCC
CGACGAGCCCGCCTGCTGACCGATGATGCCCGCCCGAGCCCAGTGTCCTGAGCGTCAAGGGCAAGAAGGTGCTGC
ACATCGACCGAAACAATCACTACGGCGGGTGCGTCCCCATACTTTTTTTTAGGGACCGAGTCGCTCACATCTCGC
CTCTCTCTGGCTGCTGGAAGCTCCATCGTGTCTCCTCTCCAATTGCCTCTCCTTTGCTGACCTTCTCTCTCTCTC
CCCATCAATTTTTTTCCCTCTCCCCAGAGAGGCCGCCTCCGTGAATCTCGAAACGGTCCGTCTCCACCCTNNCCT
CTGACCTCGCCTCGGCCGCGGAGCAGCTCTTCAAGAAATATGGCAACTTCCAAAAAGGCGAGGAGCCGTGGAAGA
AATACGGCCGCCCCAACGACTGGAACATCGACCTGATCCCCAAGTTCCTCATGTCGTCGGGCGAGCTGACCAACA
TCCTCGTCTCCACCGACGTCACCCGCTACCTCGAGTTCAAGCAGGTCGCCGGCAGCTTCGTCCAGCAGGGCTCCG
GGCCCAAGGCCACCGTCGCCAAGGTGCCCTCGGACGCGGCCGAGGCCCTCAAGTCGCCCCTCATGGGCATCTTCG
AGAAGCGCCGGATGAAGTCCTTCATCGAGTGGGTCGGCACCTTTGACCTCAAGGACCCGGCCACCCACAAGGGTC
CGTCTCCCCTCCTCCTCCTCTTCTTCCTCTCCCTCCTCCCTCCTCCCCCGCACTGACCGAGGCTCGCCAGGCCTC
GACCTCAACACGTGCACCATGCGCGACGTCTACGACAAGTTCGGCCTCGAGGCCTCCACCAAGGACTTCACCGGC
CACGCCATGGCCCTCTACCTCACCGACGACTACATCAACGCCAAGGGCCAGGCCCCCGAGGCCATCGAGCGCATC
CGCCTCTACGGCAACTCCGTCGCCCGCTACGGCAAGTCGCCCTACATCTACCCGCTCTACGGCCTCGGCGAGCTG
CCCCAGGGCTTCGCCCGCCTGTCCGCCATCTACGGCGGCACCTACATGCTCAACACCAACGTCGACGAGCTGCTC
TACGACGGCGAACGCGCCGTCGGCATCAAGGCCACCATGACCACCGGCGCCGACGACATGAAGTTCGAGACCAAG
GCCAAGATGATCCTCGGCGACCCCTCCTACTTCCCCGCCAAGACCAGGGCCATCGGCCACGTCCTGCGCGCCATC
TGCATCCTTAAGCACCCCCTGGCCGGCACCAACGACAGCGACTCGTGCCAGCTCATCATCCCCCAGTCGCAGGTC
GGCCGCAAGAACGGTAAGCCCGCGCCCGCCACCCGGTCGGGCGTCGCCCGCCCCGCTGACGGCGCCACGCCACGC
AGACATCTACATCGCCTGCGTCTCCTCGGCCCACAACGTCTGCCCCAAGGGCTACTGGATCGCCATCGTGTCGAC
CATTGCCGAGTCGTCGGCCAACCACCACCTCGAGCTGCAGCCCGGCCTGGACCGCCTGGGCGCCATCGAGGAGCA
GTTTATGGTGAGTGCCGTCGTCGTTTTTTTTGTTTCCCCGAAAAATGGGTACAGACTTGCTCATCCGTGCTGTGA
CCCTAAAAGGGCCCGCCCATCCCCATGTACGAGCCGGTCGAGGACGGCACCAAGGACCACATCTTCATGTCCAAG
AGCTACGACGCCACCAGCCACTTCGAGACGACGACGGACGACGTCAAGGACATCTACCGCCGCTGCACCGGCGAG
GAGCTCAAGGTCGAGGGCCTGAGAGAGGGCATCACCGTCGCGGCGGAGCAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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