© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3640 |
| Gene name | |
| Location | Contig_197:26958..29063 |
| Strand | - |
| Gene length (bp) | 2105 |
| Transcript length (bp) | 1959 |
| Coding sequence length (bp) | 1959 |
| Protein length (aa) | 653 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11951 | Fungal_trans_2 | Fungal specific transcription factor domain | 2.1E-42 | 270 | 648 |
| PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 2.2E-07 | 15 | 45 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P39001|UME6_YEAST | Transcriptional regulatory protein UME6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UME6 PE=1 SV=2 | 11 | 48 | 9.0E-08 |
| sp|P28875|CZF1_CANAW | Zinc finger protein 1 OS=Candida albicans (strain WO-1) GN=CZF1 PE=3 SV=2 | 12 | 48 | 4.0E-07 |
| sp|Q5A0W9|CZF1_CANAL | Zinc cluster transcription factor CZF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CZF1 PE=1 SV=1 | 12 | 48 | 5.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0008150 | biological_process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0005488 | binding | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0003700 | DNA-binding transcription factor activity | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0043169 | cation binding | No |
| GO:0065007 | biological regulation | No |
| GO:0043167 | ion binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0080090 | regulation of primary metabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.5504 | 0.8502 | 0.0383 | 0.0297 | 0.0536 | 0.0127 | 0.0672 | 0.021 | 0.0537 | 0.0177 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Orthofinder run ID | 4 |
| Orthogroup | 2503 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3640 MGAMIRVMPIIRSRTGCFTCRRRKKKCNEEKPVCSGCRRNKLDCRWPADSASSSVSSPAARHLRDKASPTAPLRP SSEPASPPERLPVVVALSPSSEDAPAYPHFHHLHHQPLRPHQQLHHRGPPPPPPPQHQQQLPSPASPPPPPPKRR MLAPASSYPLTRPGSSTAARFFDLADTEPDAVAAADIIDSSRSNGLGSPVSPPSAATTTIASVSGASSESPSDDA GLADYGEEAEQLPEIDQAISLQQLQQLGLSPPMELLPSHSHNSYELFSFYLARTANSMGNGSTDVNPFIAKLVPL AFSNPLVLQLILAQSAAHRQVSSDAEPGGEIAQQYYTDSLRMFRNVVDEYVSGNDENTLTLTVGSLILCLTEVAR GDVCGTVFDHLTASRSLLTTLLEKPESDVLLGDLPDFLVEYYMHTAASSMIGTDPHSNRPAMLSPNIEQMARALV ARKYIGQLCGCWLELLLLIPQIFQLGKTMLPPVNAEPRTKQVSADDIITFGFLQSQILAFTPPQSASLYSQLAGL VFKQGVLLYLWSILGLPDQHDAQGAHRCLIEGAVSEAVSLLSTFPASARVNTSLCWPLAVIGCCTSDPDTRDVLR TRLQTMIDTIGLGNMRETLILLEHVWRQPVDETTPWSLYKSMQEHQIWISFA* |
| Coding | >Hirsu2|3640 ATGGGCGCCATGATCCGTGTCATGCCCATCATCCGGAGTCGGACGGGCTGCTTCACCTGCCGGCGGCGCAAGAAG AAGTGCAACGAGGAGAAGCCGGTGTGCTCCGGCTGCCGACGCAACAAGCTCGACTGCCGCTGGCCCGCCGATTCG GCCTCGTCGTCGGTCTCATCCCCGGCCGCCCGGCATCTGCGCGACAAGGCCTCGCCCACCGCCCCGCTGCGACCG TCCTCCGAGCCGGCGAGCCCGCCGGAGCGGCTTCCCGTCGTTGTCGCCCTATCGCCGAGCTCGGAAGACGCTCCC GCGTATCCTCATTTCCACCACCTTCATCACCAGCCCCTGAGGCCGCATCAGCAGCTCCATCATCGTGGGCCGCCG CCGCCGCCGCCGCCGCAACACCAGCAGCAGCTGCCGTCGCCGGCGTCGCCTCCGCCCCCGCCTCCGAAGCGCCGG ATGTTGGCGCCTGCGTCGAGCTATCCCCTGACCCGGCCCGGCTCCTCGACGGCCGCCCGCTTCTTCGACCTTGCC GACACCGAGCCCGACGCCGTAGCCGCCGCCGATATCATCGATTCGTCCAGGAGCAACGGGCTCGGCTCCCCCGTC TCGCCCCCGTCTGCTGCCACCACCACCATTGCCAGCGTCTCCGGCGCTTCCTCCGAGAGCCCGTCAGACGATGCC GGCCTGGCCGACTACGGCGAAGAGGCCGAGCAGCTCCCGGAGATCGACCAGGCCATCAGCCTGCAGCAGCTGCAG CAGCTCGGCCTCAGCCCGCCCATGGAGCTGCTGCCCTCCCACAGCCACAACTCGTACGAGCTGTTCAGCTTCTAC CTGGCCCGGACCGCCAACAGCATGGGTAACGGCTCGACCGACGTGAACCCCTTCATCGCCAAGCTCGTCCCCCTC GCCTTCTCCAACCCGCTCGTGCTCCAGCTCATCCTGGCCCAGAGCGCGGCCCATCGCCAAGTGTCTAGCGACGCA GAGCCCGGCGGCGAGATTGCGCAGCAGTACTATACTGATTCGCTCAGGATGTTTCGCAACGTCGTGGACGAGTAC GTCTCGGGCAACGACGAAAACACGCTGACGTTGACGGTCGGAAGCCTTATTCTGTGCCTCACCGAGGTTGCTCGA GGAGATGTCTGCGGGACCGTCTTCGACCACCTCACGGCCTCCAGGTCATTGCTGACAACCCTGCTGGAGAAGCCC GAGTCAGATGTACTTCTCGGCGACCTGCCGGACTTCCTCGTCGAGTACTACATGCATACGGCAGCCTCGAGCATG ATCGGGACCGACCCTCACAGCAACCGGCCGGCGATGCTGAGCCCCAACATCGAGCAGATGGCTCGCGCTCTCGTG GCCAGAAAGTACATCGGCCAGCTCTGCGGCTGCTGGCTGGAGCTGCTGCTGCTGATCCCCCAGATCTTCCAGCTG GGCAAGACGATGCTGCCGCCGGTGAACGCAGAGCCCAGGACGAAGCAGGTCTCGGCCGACGACATCATCACCTTT GGCTTCCTGCAGTCGCAGATCTTGGCCTTCACGCCGCCGCAATCTGCGAGCCTCTACAGCCAGCTCGCCGGCCTG GTCTTCAAGCAGGGCGTGCTCCTGTATCTCTGGAGCATCCTCGGCCTCCCCGACCAGCACGACGCGCAGGGGGCG CACAGATGTCTGATCGAGGGCGCCGTGTCCGAGGCCGTCTCCCTGTTGAGCACCTTTCCCGCCTCGGCCAGGGTC AACACCAGCCTGTGCTGGCCGCTGGCCGTCATCGGCTGCTGCACGTCGGACCCGGACACGCGCGACGTCCTCAGG ACACGGCTGCAGACCATGATCGACACCATCGGGCTGGGCAATATGCGGGAGACGCTGATACTGCTCGAGCACGTG TGGAGGCAGCCGGTCGACGAGACAACTCCTTGGTCTCTTTACAAGTCGATGCAGGAGCACCAGATATGGATATCC TTTGCCTGA |
| Transcript | >Hirsu2|3640 ATGGGCGCCATGATCCGTGTCATGCCCATCATCCGGAGTCGGACGGGCTGCTTCACCTGCCGGCGGCGCAAGAAG AAGTGCAACGAGGAGAAGCCGGTGTGCTCCGGCTGCCGACGCAACAAGCTCGACTGCCGCTGGCCCGCCGATTCG GCCTCGTCGTCGGTCTCATCCCCGGCCGCCCGGCATCTGCGCGACAAGGCCTCGCCCACCGCCCCGCTGCGACCG TCCTCCGAGCCGGCGAGCCCGCCGGAGCGGCTTCCCGTCGTTGTCGCCCTATCGCCGAGCTCGGAAGACGCTCCC GCGTATCCTCATTTCCACCACCTTCATCACCAGCCCCTGAGGCCGCATCAGCAGCTCCATCATCGTGGGCCGCCG CCGCCGCCGCCGCCGCAACACCAGCAGCAGCTGCCGTCGCCGGCGTCGCCTCCGCCCCCGCCTCCGAAGCGCCGG ATGTTGGCGCCTGCGTCGAGCTATCCCCTGACCCGGCCCGGCTCCTCGACGGCCGCCCGCTTCTTCGACCTTGCC GACACCGAGCCCGACGCCGTAGCCGCCGCCGATATCATCGATTCGTCCAGGAGCAACGGGCTCGGCTCCCCCGTC TCGCCCCCGTCTGCTGCCACCACCACCATTGCCAGCGTCTCCGGCGCTTCCTCCGAGAGCCCGTCAGACGATGCC GGCCTGGCCGACTACGGCGAAGAGGCCGAGCAGCTCCCGGAGATCGACCAGGCCATCAGCCTGCAGCAGCTGCAG CAGCTCGGCCTCAGCCCGCCCATGGAGCTGCTGCCCTCCCACAGCCACAACTCGTACGAGCTGTTCAGCTTCTAC CTGGCCCGGACCGCCAACAGCATGGGTAACGGCTCGACCGACGTGAACCCCTTCATCGCCAAGCTCGTCCCCCTC GCCTTCTCCAACCCGCTCGTGCTCCAGCTCATCCTGGCCCAGAGCGCGGCCCATCGCCAAGTGTCTAGCGACGCA GAGCCCGGCGGCGAGATTGCGCAGCAGTACTATACTGATTCGCTCAGGATGTTTCGCAACGTCGTGGACGAGTAC GTCTCGGGCAACGACGAAAACACGCTGACGTTGACGGTCGGAAGCCTTATTCTGTGCCTCACCGAGGTTGCTCGA GGAGATGTCTGCGGGACCGTCTTCGACCACCTCACGGCCTCCAGGTCATTGCTGACAACCCTGCTGGAGAAGCCC GAGTCAGATGTACTTCTCGGCGACCTGCCGGACTTCCTCGTCGAGTACTACATGCATACGGCAGCCTCGAGCATG ATCGGGACCGACCCTCACAGCAACCGGCCGGCGATGCTGAGCCCCAACATCGAGCAGATGGCTCGCGCTCTCGTG GCCAGAAAGTACATCGGCCAGCTCTGCGGCTGCTGGCTGGAGCTGCTGCTGCTGATCCCCCAGATCTTCCAGCTG GGCAAGACGATGCTGCCGCCGGTGAACGCAGAGCCCAGGACGAAGCAGGTCTCGGCCGACGACATCATCACCTTT GGCTTCCTGCAGTCGCAGATCTTGGCCTTCACGCCGCCGCAATCTGCGAGCCTCTACAGCCAGCTCGCCGGCCTG GTCTTCAAGCAGGGCGTGCTCCTGTATCTCTGGAGCATCCTCGGCCTCCCCGACCAGCACGACGCGCAGGGGGCG CACAGATGTCTGATCGAGGGCGCCGTGTCCGAGGCCGTCTCCCTGTTGAGCACCTTTCCCGCCTCGGCCAGGGTC AACACCAGCCTGTGCTGGCCGCTGGCCGTCATCGGCTGCTGCACGTCGGACCCGGACACGCGCGACGTCCTCAGG ACACGGCTGCAGACCATGATCGACACCATCGGGCTGGGCAATATGCGGGAGACGCTGATACTGCTCGAGCACGTG TGGAGGCAGCCGGTCGACGAGACAACTCCTTGGTCTCTTTACAAGTCGATGCAGGAGCACCAGATATGGATATCC TTTGCCTGA |
| Gene | >Hirsu2|3640 ATGGGCGCCATGATCCGTGTCATGCCCATCATCCGGAGTCGGACGGGCTGCTTCACCTGCCGGCGGCGCAAGAAG AAGTGCAACGAGGAGAAGCCGGTGTGCTCCGGCTGCCGACGCAACAAGCTCGACTGCCGCTGGCCCGCCGATTCG GCCTCGTCGTCGGTCTCATCCCCGGCCGCCCGGCATCTGCGCGACAAGGCCTCGCCCACCGCCCCGCTGCGACCG TCCTCCGAGCCGGCGAGCCCGCCGGAGCGGCTTCCCGTCGTTGTCGCCCTATCGCCGAGCTCGGAAGACGCTCCC GCGTATCCTCATTTCCACCACCTTCATCACCAGCCCCTGAGGCCGCATCAGCAGCTCCATCATCGTGGGCCGCCG CCGCCGCCGCCGCCGCAACACCAGCAGCAGCTGCCGTCGCCGGCGTCGCCTCCGCCCCCGCCTCCGAAGCGCCGG ATGTTGGCGCCTGCGTCGAGCTATCCCCTGACCCGGCCCGGCTCCTCGACGGCCGCCCGCTTCTTCGACCTTGCC GACACCGAGCCCGACGCCGTAGCCGCCGCCGATATCATCGATTCGTCCAGGAGCAACGGGCTCGGCTCCCCCGTC TCGCCCCCGTCTGCTGCCACCACCACCATTGCCAGCGTCTCCGGCGCTTCCTCCGAGAGCCCGTCAGACGATGCC GGCCTGGCCGACTACGGCGAAGAGGCCGAGCAGCTCCCGGAGATCGACCAGGCCATCAGCCTGCAGCAGCTGCAG CAGCTCGGCCTCAGCCCGCCCATGGAGCTGCTGCCCTCCCACAGCCACAACTCGTACGAGCTGTTCAGCTTCTAC CTGGCCCGGACCGCCAACAGCATGGGTAACGGCTCGACCGACGTGAACCCCTTCATCGCCAAGCTCGTCCCCCTC GCCTTCTCCAACCCGCTCGTGCTCCAGCTCATCCTGGCCCAGAGCGCGGCCCATCGCCAAGTGTCTAGCGACGCA GAGCCCGGCGGCGAGATTGCGCAGCAGTACTATACTGATTCGCTCAGGATGTTTCGCAACGTCGTGGACGAGTAC GTCTCGGGCAACGACGAAAACACGCTGACGTTGACGGTCGGAAGCCTTATTCTGTGCCTCACCGAGGTCAGTTCC AATACCCGCAACCCCCCCCTTTCACGCTCTCGCCCTGCCCTTTCTCCCTCTCCGCCCGTGTCTCACTCACGATCG GCCCTTGCCGTGGCACGGGGATTTGTGCCGATGCTGACAGTCGTCCCCTGGGTGCTGTACAGGTTGCTCGAGGAG ATGTCTGCGGGACCGTCTTCGACCACCTCACGGCCTCCAGGTCATTGCTGACAACCCTGCTGGAGAAGCCCGAGT CAGATGTACTTCTCGGCGACCTGCCGGACTTCCTCGTCGAGTACTACATGCATACGGCAGCCTCGAGCATGATCG GGACCGACCCTCACAGCAACCGGCCGGCGATGCTGAGCCCCAACATCGAGCAGATGGCTCGCGCTCTCGTGGCCA GAAAGTACATCGGCCAGCTCTGCGGCTGCTGGCTGGAGCTGCTGCTGCTGATCCCCCAGATCTTCCAGCTGGGCA AGACGATGCTGCCGCCGGTGAACGCAGAGCCCAGGACGAAGCAGGTCTCGGCCGACGACATCATCACCTTTGGCT TCCTGCAGTCGCAGATCTTGGCCTTCACGCCGCCGCAATCTGCGAGCCTCTACAGCCAGCTCGCCGGCCTGGTCT TCAAGCAGGGCGTGCTCCTGTATCTCTGGAGCATCCTCGGCCTCCCCGACCAGCACGACGCGCAGGGGGCGCACA GATGTCTGATCGAGGGCGCCGTGTCCGAGGCCGTCTCCCTGTTGAGCACCTTTCCCGCCTCGGCCAGGGTCAACA CCAGCCTGTGCTGGCCGCTGGCCGTCATCGGCTGCTGCACGTCGGACCCGGACACGCGCGACGTCCTCAGGACAC GGCTGCAGACCATGATCGACACCATCGGGCTGGGCAATATGCGGGAGACGCTGATACTGCTCGAGCACGTGTGGA GGCAGCCGGTCGACGAGACAACTCCTTGGTCTCTTTACAAGTCGATGCAGGAGCACCAGATATGGATATCCTTTG CCTGA |