Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3639
Gene name
LocationContig_197:24597..26292
Strand+
Gene length (bp)1695
Transcript length (bp)1470
Coding sequence length (bp)1470
Protein length (aa) 490

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 2.9E-31 34 407
PF06779 MFS_4 Uncharacterised MFS-type transporter YbfB 1.1E-07 54 206

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 10 482 8.0E-128
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 7 464 3.0E-117
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 18 482 2.0E-54
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 11 459 6.0E-38
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 18 326 3.0E-29
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Swissprot ID Swissprot Description Start End E-value
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 10 482 8.0E-128
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 7 464 3.0E-117
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 18 482 2.0E-54
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 11 459 6.0E-38
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 18 326 3.0E-29
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 14 234 3.0E-27
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 11 216 6.0E-25
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 18 228 2.0E-24
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 15 234 3.0E-24
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 18 228 3.0E-24
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 18 457 1.0E-22
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 21 235 1.0E-19
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 10 235 2.0E-18
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 24 235 2.0E-18
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 10 235 4.0E-18
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 4 484 6.0E-17
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 12 235 7.0E-17
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 6 235 9.0E-16
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 27 259 2.0E-15
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 19 260 6.0E-15
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 18 309 5.0E-14
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 15 260 2.0E-13
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 1 217 5.0E-13
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 8 248 8.0E-11
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 8 248 8.0E-11
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 18 235 4.0E-10
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 22 229 1.0E-09
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 24 216 6.0E-09
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 10 239 2.0E-08
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 23 206 8.0E-08
sp|P42205|GUDP_PSEPU Probable glucarate transporter OS=Pseudomonas putida GN=gudP PE=3 SV=1 24 199 2.0E-07
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 8 161 4.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 95 114 19
3 155 177 22
4 192 211 19
5 256 275 19
6 295 317 22
7 329 351 22
8 361 383 22
9 396 418 22
10 428 450 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3639
MAPRRLRDRPHADRRPGEKALVRKIDFFILTFCCLSYLINYLDRSNLANAYVSGMRDELGFEGSQLNQVNTCFTV
GYILGQVPSNLSLHYVRPRVWFPAMMLLWGGLTMVTAAARAPQSVMAIRFFQGFCEASTFVGTHYVLGAWYTERE
LGKRSGIFTSSGLAGTAIGGFIQTGIHRSLDGRHGLSGWRWLFLVDGLLTVPVALYGFLLFPDTPDTTTASYLTP
AERALAAARVPPAPDAPSPLTARFLARVLRSWHWWGFVGLWVIAGETESFGSNSLLALYMQSHPVRRYSVAQMNN
YPTGVAAAGIVSTLFWSALTDFLGGRRYLVGYFIAVTGVSTSAMILAASRHPASPSSTATVFAAYYWAGAVYACQ
ATFFAWCNDAMRFEPAASRGLVLAGMNLGNNAVNAWWSIVFYSASTAPWFVRGMWAMIACSVALALWTAGLSFVI
RRNEARRALEASETSSVRPEATIERHGAADEKRPAPEEP*
Coding >Hirsu2|3639
ATGGCGCCTCGGCGGCTCCGCGATCGTCCTCACGCCGACCGCCGGCCGGGCGAGAAGGCTCTGGTGCGGAAGATC
GACTTCTTCATCCTCACCTTTTGCTGCCTGAGTTACCTGATCAACTATCTCGACCGCTCCAACCTGGCCAACGCC
TATGTGTCGGGCATGCGTGATGAGCTGGGCTTCGAGGGCAGCCAGCTCAACCAGGTCAACACCTGCTTCACGGTC
GGATACATCCTCGGCCAGGTCCCGTCCAACCTGTCGCTACACTACGTCCGGCCGCGCGTCTGGTTTCCTGCCATG
ATGCTTCTCTGGGGCGGGCTGACGATGGTGACGGCCGCCGCCCGCGCGCCGCAGTCTGTCATGGCCATCCGCTTC
TTCCAGGGCTTCTGCGAGGCCTCGACCTTCGTCGGCACCCACTACGTCCTGGGCGCCTGGTACACTGAGCGCGAG
CTGGGCAAGCGCAGCGGCATCTTCACTTCGTCCGGGCTCGCCGGCACCGCCATCGGCGGCTTCATCCAGACCGGC
ATCCACCGCAGCCTGGACGGCCGCCACGGCCTGAGCGGTTGGCGCTGGCTCTTCCTCGTCGACGGCCTCCTGACG
GTCCCCGTCGCCCTCTATGGCTTCCTCCTCTTCCCGGACACGCCCGACACCACGACGGCCTCGTACCTGACGCCG
GCCGAGCGGGCCCTCGCCGCCGCCCGCGTGCCGCCCGCGCCCGACGCCCCGTCCCCCCTGACGGCCCGCTTCCTG
GCGCGCGTTCTGAGGAGCTGGCACTGGTGGGGGTTCGTCGGCCTCTGGGTCATTGCCGGCGAGACCGAGTCGTTC
GGCTCCAACTCGCTCCTCGCGCTCTACATGCAGAGCCACCCGGTCCGGCGGTACAGCGTCGCGCAGATGAACAAC
TATCCCACCGGCGTGGCTGCCGCCGGCATAGTTTCGACGCTTTTCTGGTCGGCGCTGACCGACTTCCTCGGCGGT
AGACGCTATCTCGTCGGTTACTTCATCGCCGTGACCGGCGTCTCGACCTCAGCCATGATACTCGCTGCCTCTCGC
CATCCCGCGAGCCCGTCGTCCACGGCGACCGTCTTCGCCGCCTACTACTGGGCCGGCGCCGTATACGCCTGCCAG
GCCACCTTCTTCGCCTGGTGCAACGATGCCATGCGCTTCGAGCCGGCCGCTTCCCGCGGCCTCGTCCTGGCCGGC
ATGAATCTGGGCAACAACGCGGTCAATGCCTGGTGGAGCATCGTCTTCTATAGCGCCTCCACGGCGCCCTGGTTT
GTGAGGGGCATGTGGGCTATGATTGCCTGCTCTGTTGCCCTTGCACTCTGGACGGCGGGCCTGTCCTTTGTGATC
CGTAGAAATGAGGCCAGAAGAGCGCTGGAGGCAAGTGAGACGAGCAGCGTTCGGCCTGAAGCCACCATCGAACGC
CACGGGGCCGCCGACGAGAAACGCCCCGCACCGGAGGAGCCGTAG
Transcript >Hirsu2|3639
ATGGCGCCTCGGCGGCTCCGCGATCGTCCTCACGCCGACCGCCGGCCGGGCGAGAAGGCTCTGGTGCGGAAGATC
GACTTCTTCATCCTCACCTTTTGCTGCCTGAGTTACCTGATCAACTATCTCGACCGCTCCAACCTGGCCAACGCC
TATGTGTCGGGCATGCGTGATGAGCTGGGCTTCGAGGGCAGCCAGCTCAACCAGGTCAACACCTGCTTCACGGTC
GGATACATCCTCGGCCAGGTCCCGTCCAACCTGTCGCTACACTACGTCCGGCCGCGCGTCTGGTTTCCTGCCATG
ATGCTTCTCTGGGGCGGGCTGACGATGGTGACGGCCGCCGCCCGCGCGCCGCAGTCTGTCATGGCCATCCGCTTC
TTCCAGGGCTTCTGCGAGGCCTCGACCTTCGTCGGCACCCACTACGTCCTGGGCGCCTGGTACACTGAGCGCGAG
CTGGGCAAGCGCAGCGGCATCTTCACTTCGTCCGGGCTCGCCGGCACCGCCATCGGCGGCTTCATCCAGACCGGC
ATCCACCGCAGCCTGGACGGCCGCCACGGCCTGAGCGGTTGGCGCTGGCTCTTCCTCGTCGACGGCCTCCTGACG
GTCCCCGTCGCCCTCTATGGCTTCCTCCTCTTCCCGGACACGCCCGACACCACGACGGCCTCGTACCTGACGCCG
GCCGAGCGGGCCCTCGCCGCCGCCCGCGTGCCGCCCGCGCCCGACGCCCCGTCCCCCCTGACGGCCCGCTTCCTG
GCGCGCGTTCTGAGGAGCTGGCACTGGTGGGGGTTCGTCGGCCTCTGGGTCATTGCCGGCGAGACCGAGTCGTTC
GGCTCCAACTCGCTCCTCGCGCTCTACATGCAGAGCCACCCGGTCCGGCGGTACAGCGTCGCGCAGATGAACAAC
TATCCCACCGGCGTGGCTGCCGCCGGCATAGTTTCGACGCTTTTCTGGTCGGCGCTGACCGACTTCCTCGGCGGT
AGACGCTATCTCGTCGGTTACTTCATCGCCGTGACCGGCGTCTCGACCTCAGCCATGATACTCGCTGCCTCTCGC
CATCCCGCGAGCCCGTCGTCCACGGCGACCGTCTTCGCCGCCTACTACTGGGCCGGCGCCGTATACGCCTGCCAG
GCCACCTTCTTCGCCTGGTGCAACGATGCCATGCGCTTCGAGCCGGCCGCTTCCCGCGGCCTCGTCCTGGCCGGC
ATGAATCTGGGCAACAACGCGGTCAATGCCTGGTGGAGCATCGTCTTCTATAGCGCCTCCACGGCGCCCTGGTTT
GTGAGGGGCATGTGGGCTATGATTGCCTGCTCTGTTGCCCTTGCACTCTGGACGGCGGGCCTGTCCTTTGTGATC
CGTAGAAATGAGGCCAGAAGAGCGCTGGAGGCAAGTGAGACGAGCAGCGTTCGGCCTGAAGCCACCATCGAACGC
CACGGGGCCGCCGACGAGAAACGCCCCGCACCGGAGGAGCCGTAG
Gene >Hirsu2|3639
ATGGCGCCTCGGCGGCTCCGCGATCGTCCTCACGCCGACCGCCGGCCGGGCGAGAAGGCTCTGGTGCGGAAGATC
GACTTCTTCATCCTCACCTTTTGCTGCCTGAGTTACCTGATCAACTATGTAGGTCCCGACTGCGGCTCTTTCCGG
GAGCACTCCGTTCGGGTTCGTTGACGATGCCGCTTCTCTGCACGTGTCGTTGCGCCTCTCGCAGCTCGACCGCTC
CAACCTGGCCAACGCCTATGTGTCGGGCATGCGTGATGAGCTGGGCTTCGAGGGCAGCCAGCTCAACCAGGTCAA
CACCTGCTTCACGGTCGGGTAAGGACCGAGTCCTGTCGTCGCGACGTCGCTGGCAAGCCATGCTCACGCGCCCTC
GCAAGCTAGATACATCCTCGGCCAGGTCCCGTCCAACCTGTCGCTACACTACGTCCGGCCGCGCGTCTGGTTTCC
TGCCATGATGCTTCTCTGGGGCGGGCTGACGATGGTGACGGCCGCCGCCCGCGCGCCGCAGTCTGTCATGGCCAT
CCGCTTCTTCCAGGGCTTCTGCGAGGCCTCGACCTTCGTCGGCACCCACTACGTCCTGGGCGCCTGGTACACTGA
GCGCGAGCTGGGCAAGCGCAGCGGCATCTTCACTTCGTCCGGGCTCGCCGGCACCGCCATCGGCGGCTTCATCCA
GACCGGCATCCACCGCAGCCTGGACGGCCGCCACGGCCTGAGCGGTTGGCGCTGGCTCTTCCTCGTCGACGGCCT
CCTGACGGTCCCCGTCGCCCTCTATGGCTTCCTCCTCTTCCCGGACACGCCCGACACCACGACGGCCTCGTACCT
GACGCCGGCCGAGCGGGCCCTCGCCGCCGCCCGCGTGCCGCCCGCGCCCGACGCCCCGTCCCCCCTGACGGCCCG
CTTCCTGGCGCGCGTTCTGAGGAGCTGGCACTGGTGGGGGTTCGTCGGCCTCTGGGTCATTGCCGGCGAGACCGA
GTCGTTCGGCTCCAACTCGCTCCTCGCGCTCTACATGCAGAGCCACCCGGTCCGGCGGTACAGCGTCGCGCAGAT
GAACAACTATCCCACCGGCGTGGCTGCCGCCGGCATAGTTTCGACGCTTTTCTGGTCGGCGCTGACCGACTTCCT
CGGCGGTAGACGCTATCTCGTCGGTTACTTCATCGCCGTGACCGGCGTCTCGACCTCAGCCATGATACTCGCTGC
CTCTCGCCATCCCGCGAGCCCGTCGTCCACGGCGACCGTCTTCGCCGCCTACTACTGGGCCGGCGCCGTATACGC
CTGCCAGGCCACCTTCTTCGCCTGGTGCAACGATGCCATGCGCTTCGAGCCGGCCGCTTCCCGCGGCCTCGTCCT
GGCCGGCATGAATCTGGGCAACAACGCGGTCAATGCCTGGTGGAGCATCGTCTTCTATAGCGCCTCCACGGCGCC
CTGGTTTGTGGTACGTGGCCCGACCCTGTGAGCCTTCACTCACCCTCGTGCCTGCTAATGGGGAGCGTTGGACGG
CAGAGGGGCATGTGGGCTATGATTGCCTGCTCTGTTGCCCTTGCACTCTGGACGGCGGGCCTGTCCTTTGTGATC
CGTAGAAATGAGGCCAGAAGAGCGCTGGAGGCAAGTGAGACGAGCAGCGTTCGGCCTGAAGCCACCATCGAACGC
CACGGGGCCGCCGACGAGAAACGCCCCGCACCGGAGGAGCCGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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