Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3633
Gene name
LocationContig_197:7791..8780
Strand+
Gene length (bp)989
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.45

Transmembrane Domains

Domain # Start End Length
1 291 313 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3633
MTQKAISVAADSKTGKQDFPSRAVFLDSCVCRWQGNGWIEVPQREGSTIPRFGWNWMSSSGGEAAPGDAARHVLL
FAFVTGNLARAGTWSPLDAHRFLRMSDRLHVECSLVRGEAMPGTLCGRSVDGRRRPMSIRHTDTLRAAASAAARL
LQGAHCAPDDDGTAWHGMASWPSRAPSVSTRDEGLPLYKEHTGRCQPLAAGLARTWAVQLRWVQREASNFFLVQR
RADVAARVCGAAQGSQECRIGRYLRQSGRSGIMDGPVDGIVSAAERRRERDGQKEERDQARKRSGFVPNVNLVVN
IVVIAVIVVVVVVL*
Coding >Hirsu2|3633
ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC
TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA
CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG
TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG
TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC
GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG
CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT
CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC
GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA
CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG
CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA
GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC
ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA
Transcript >Hirsu2|3633
ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC
TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA
CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG
TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG
TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC
GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG
CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT
CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC
GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA
CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG
CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA
GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC
ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA
Gene >Hirsu2|3633
ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC
TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA
CGGTTCGGGTGGAACTGGATGAGCGTGAGTCCATGGCCGCCGAGTCGTATAGCGCATGCTGGCTATAGTCGAGCG
GTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTGTTTGCTTTCGTCACGGGCAATCTCGCCAGAG
CAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATGTCCGACCGACTGCACGTCGAGTGCTCCTTGG
TCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTCGACGGCCGCCGCCGGCCCATGTCCATACGAC
ACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTGCTGCAGGGCGCCCATTGCGCGCCGGACGACG
ACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCTCCGTCCGTGTCGACTCGCGACGAAGGGCTTC
CGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCCGGACTGGCGCGTACTTGGGCGGTACAACTGC
GGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGACGGGCCGATGTTGCAGCTAGAGTGTGTGGAG
CGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGGCAATCCGGACGATCCGGCATCATGGATGGCC
CTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGAGACGGACAGAAGGAAGAGAGGGATCAGGCGC
GGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAACATCGTCGTCATCGCCGTCATCGTCGTCGTTG
TCGTCGTCCTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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