Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3633
Gene name
LocationContig_197:7791..8780
Strand+
Gene length (bp)989
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Signal peptide 0.5166 0.4703 0.4485 0.1066 0.2467 0.0383 0.202 0.2231 0.2826 0.0879

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 291 313 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9388
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|3633 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3633
MTQKAISVAADSKTGKQDFPSRAVFLDSCVCRWQGNGWIEVPQREGSTIPRFGWNWMSSSGGEAAPGDAARHVLL
FAFVTGNLARAGTWSPLDAHRFLRMSDRLHVECSLVRGEAMPGTLCGRSVDGRRRPMSIRHTDTLRAAASAAARL
LQGAHCAPDDDGTAWHGMASWPSRAPSVSTRDEGLPLYKEHTGRCQPLAAGLARTWAVQLRWVQREASNFFLVQR
RADVAARVCGAAQGSQECRIGRYLRQSGRSGIMDGPVDGIVSAAERRRERDGQKEERDQARKRSGFVPNVNLVVN
IVVIAVIVVVVVVL*
Coding >Hirsu2|3633
ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC
TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA
CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG
TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG
TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC
GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG
CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT
CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC
GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA
CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG
CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA
GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC
ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA
Transcript >Hirsu2|3633
ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC
TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA
CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG
TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG
TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC
GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG
CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT
CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC
GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA
CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG
CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA
GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC
ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA
Gene >Hirsu2|3633
ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC
TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA
CGGTTCGGGTGGAACTGGATGAGCGTGAGTCCATGGCCGCCGAGTCGTATAGCGCATGCTGGCTATAGTCGAGCG
GTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTGTTTGCTTTCGTCACGGGCAATCTCGCCAGAG
CAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATGTCCGACCGACTGCACGTCGAGTGCTCCTTGG
TCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTCGACGGCCGCCGCCGGCCCATGTCCATACGAC
ACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTGCTGCAGGGCGCCCATTGCGCGCCGGACGACG
ACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCTCCGTCCGTGTCGACTCGCGACGAAGGGCTTC
CGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCCGGACTGGCGCGTACTTGGGCGGTACAACTGC
GGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGACGGGCCGATGTTGCAGCTAGAGTGTGTGGAG
CGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGGCAATCCGGACGATCCGGCATCATGGATGGCC
CTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGAGACGGACAGAAGGAAGAGAGGGATCAGGCGC
GGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAACATCGTCGTCATCGCCGTCATCGTCGTCGTTG
TCGTCGTCCTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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