© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3633 |
| Gene name | |
| Location | Contig_197:7791..8780 |
| Strand | + |
| Gene length (bp) | 989 |
| Transcript length (bp) | 945 |
| Coding sequence length (bp) | 945 |
| Protein length (aa) | 315 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Signal peptide | 0.5166 | 0.4703 | 0.4485 | 0.1066 | 0.2467 | 0.0383 | 0.202 | 0.2231 | 0.2826 | 0.0879 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 291 | 313 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 9388 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3633 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3633 MTQKAISVAADSKTGKQDFPSRAVFLDSCVCRWQGNGWIEVPQREGSTIPRFGWNWMSSSGGEAAPGDAARHVLL FAFVTGNLARAGTWSPLDAHRFLRMSDRLHVECSLVRGEAMPGTLCGRSVDGRRRPMSIRHTDTLRAAASAAARL LQGAHCAPDDDGTAWHGMASWPSRAPSVSTRDEGLPLYKEHTGRCQPLAAGLARTWAVQLRWVQREASNFFLVQR RADVAARVCGAAQGSQECRIGRYLRQSGRSGIMDGPVDGIVSAAERRRERDGQKEERDQARKRSGFVPNVNLVVN IVVIAVIVVVVVVL* |
| Coding | >Hirsu2|3633 ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA |
| Transcript | >Hirsu2|3633 ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA |
| Gene | >Hirsu2|3633 ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA CGGTTCGGGTGGAACTGGATGAGCGTGAGTCCATGGCCGCCGAGTCGTATAGCGCATGCTGGCTATAGTCGAGCG GTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTGTTTGCTTTCGTCACGGGCAATCTCGCCAGAG CAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATGTCCGACCGACTGCACGTCGAGTGCTCCTTGG TCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTCGACGGCCGCCGCCGGCCCATGTCCATACGAC ACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTGCTGCAGGGCGCCCATTGCGCGCCGGACGACG ACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCTCCGTCCGTGTCGACTCGCGACGAAGGGCTTC CGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCCGGACTGGCGCGTACTTGGGCGGTACAACTGC GGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGACGGGCCGATGTTGCAGCTAGAGTGTGTGGAG CGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGGCAATCCGGACGATCCGGCATCATGGATGGCC CTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGAGACGGACAGAAGGAAGAGAGGGATCAGGCGC GGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAACATCGTCGTCATCGCCGTCATCGTCGTCGTTG TCGTCGTCCTCTGA |