Protein ID | Hirsu2|3633 |
Gene name | |
Location | Contig_197:7791..8780 |
Strand | + |
Gene length (bp) | 989 |
Transcript length (bp) | 945 |
Coding sequence length (bp) | 945 |
Protein length (aa) | 315 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Signal peptide | 0.5166 | 0.4703 | 0.4485 | 0.1066 | 0.2467 | 0.0383 | 0.202 | 0.2231 | 0.2826 | 0.0879 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 291 | 313 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 9388 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|3633 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3633 MTQKAISVAADSKTGKQDFPSRAVFLDSCVCRWQGNGWIEVPQREGSTIPRFGWNWMSSSGGEAAPGDAARHVLL FAFVTGNLARAGTWSPLDAHRFLRMSDRLHVECSLVRGEAMPGTLCGRSVDGRRRPMSIRHTDTLRAAASAAARL LQGAHCAPDDDGTAWHGMASWPSRAPSVSTRDEGLPLYKEHTGRCQPLAAGLARTWAVQLRWVQREASNFFLVQR RADVAARVCGAAQGSQECRIGRYLRQSGRSGIMDGPVDGIVSAAERRRERDGQKEERDQARKRSGFVPNVNLVVN IVVIAVIVVVVVVL* |
Coding | >Hirsu2|3633 ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA |
Transcript | >Hirsu2|3633 ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA CGGTTCGGGTGGAACTGGATGAGCTCGAGCGGTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTG TTTGCTTTCGTCACGGGCAATCTCGCCAGAGCAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATG TCCGACCGACTGCACGTCGAGTGCTCCTTGGTCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTC GACGGCCGCCGCCGGCCCATGTCCATACGACACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTG CTGCAGGGCGCCCATTGCGCGCCGGACGACGACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCT CCGTCCGTGTCGACTCGCGACGAAGGGCTTCCGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCC GGACTGGCGCGTACTTGGGCGGTACAACTGCGGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGA CGGGCCGATGTTGCAGCTAGAGTGTGTGGAGCGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGG CAATCCGGACGATCCGGCATCATGGATGGCCCTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGA GACGGACAGAAGGAAGAGAGGGATCAGGCGCGGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAAC ATCGTCGTCATCGCCGTCATCGTCGTCGTTGTCGTCGTCCTCTGA |
Gene | >Hirsu2|3633 ATGACACAAAAGGCTATCAGTGTCGCAGCGGACAGTAAGACAGGTAAACAAGATTTTCCTAGCCGGGCTGTTTTC TTGGACTCATGCGTATGTAGATGGCAGGGCAATGGATGGATCGAGGTCCCACAGCGCGAGGGTTCCACGATCCCA CGGTTCGGGTGGAACTGGATGAGCGTGAGTCCATGGCCGCCGAGTCGTATAGCGCATGCTGGCTATAGTCGAGCG GTGGTGAGGCGGCGCCTGGCGATGCAGCACGGCACGTGCTGCTGTTTGCTTTCGTCACGGGCAATCTCGCCAGAG CAGGGACGTGGAGTCCCTTGGATGCTCACCGGTTCTTGAGGATGTCCGACCGACTGCACGTCGAGTGCTCCTTGG TCCGAGGCGAGGCGATGCCCGGGACCCTTTGTGGGCGGTCCGTCGACGGCCGCCGCCGGCCCATGTCCATACGAC ACACCGATACGTTGCGTGCTGCTGCTTCTGCTGCTGCCAGGCTGCTGCAGGGCGCCCATTGCGCGCCGGACGACG ACGGGACGGCATGGCATGGCATGGCATCGTGGCCATCCCGAGCTCCGTCCGTGTCGACTCGCGACGAAGGGCTTC CGCTATACAAGGAGCATACAGGGCGCTGCCAGCCCCTCGCCGCCGGACTGGCGCGTACTTGGGCGGTACAACTGC GGTGGGTTCAGCGGGAAGCGTCAAATTTTTTTCTCGTCCAGAGACGGGCCGATGTTGCAGCTAGAGTGTGTGGAG CGGCGCAGGGGAGCCAGGAGTGCCGCATTGGCCGATATCTCCGGCAATCCGGACGATCCGGCATCATGGATGGCC CTGTGGATGGCATCGTGAGCGCGGCAGAGAGACGGAGAGAGAGAGACGGACAGAAGGAAGAGAGGGATCAGGCGC GGAAAAGGTCAGGCTTCGTCCCCAACGTCAACCTCGTCGTCAACATCGTCGTCATCGCCGTCATCGTCGTCGTTG TCGTCGTCCTCTGA |