© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3627 |
| Gene name | |
| Location | Contig_1967:355..1671 |
| Strand | + |
| Gene length (bp) | 1316 |
| Transcript length (bp) | 783 |
| Coding sequence length (bp) | 783 |
| Protein length (aa) | 261 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08569 | Mo25 | Mo25-like | 4.3E-15 | 3 | 90 |
| PF08569 | Mo25 | Mo25-like | 3.9E-79 | 97 | 252 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60032|HYMA_EMENI | Conidiophore development protein hymA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hymA PE=3 SV=1 | 97 | 260 | 1.0E-79 |
| sp|Q9H9S4|CB39L_HUMAN | Calcium-binding protein 39-like OS=Homo sapiens GN=CAB39L PE=1 SV=3 | 97 | 251 | 1.0E-55 |
| sp|Q9DB16|CB39L_MOUSE | Calcium-binding protein 39-like OS=Mus musculus GN=Cab39l PE=1 SV=3 | 97 | 251 | 1.0E-55 |
| sp|Q9P7Q8|PMO25_SCHPO | Mo25-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmo25 PE=3 SV=1 | 97 | 251 | 5.0E-49 |
| sp|Q9Y376|CAB39_HUMAN | Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1 | 97 | 251 | 2.0E-46 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60032|HYMA_EMENI | Conidiophore development protein hymA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hymA PE=3 SV=1 | 97 | 260 | 1.0E-79 |
| sp|Q9H9S4|CB39L_HUMAN | Calcium-binding protein 39-like OS=Homo sapiens GN=CAB39L PE=1 SV=3 | 97 | 251 | 1.0E-55 |
| sp|Q9DB16|CB39L_MOUSE | Calcium-binding protein 39-like OS=Mus musculus GN=Cab39l PE=1 SV=3 | 97 | 251 | 1.0E-55 |
| sp|Q9P7Q8|PMO25_SCHPO | Mo25-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmo25 PE=3 SV=1 | 97 | 251 | 5.0E-49 |
| sp|Q9Y376|CAB39_HUMAN | Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1 | 97 | 251 | 2.0E-46 |
| sp|Q29RI6|CAB39_BOVIN | Calcium-binding protein 39 OS=Bos taurus GN=CAB39 PE=2 SV=1 | 97 | 251 | 2.0E-46 |
| sp|Q06138|CAB39_MOUSE | Calcium-binding protein 39 OS=Mus musculus GN=Cab39 PE=1 SV=2 | 97 | 251 | 2.0E-46 |
| sp|P91891|MO25_DROME | Protein Mo25 OS=Drosophila melanogaster GN=Mo25 PE=2 SV=2 | 97 | 257 | 7.0E-45 |
| sp|O18211|MO25M_CAEEL | MO25-like protein 2 OS=Caenorhabditis elegans GN=mop-25.2 PE=3 SV=1 | 97 | 251 | 5.0E-44 |
| sp|Q9M0M4|MO25M_ARATH | Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1 | 97 | 257 | 1.0E-43 |
| sp|Q9FGK3|MO25N_ARATH | Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1 | 97 | 257 | 1.0E-42 |
| sp|Q9XFY6|DEE76_AUXPR | Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides GN=DEE76 PE=2 SV=1 | 77 | 248 | 1.0E-37 |
| sp|Q9ZQ77|MO25L_ARATH | MO25-like protein At2g03410 OS=Arabidopsis thaliana GN=At2g03410 PE=2 SV=1 | 97 | 251 | 6.0E-36 |
| sp|P32464|HYM1_YEAST | Protein HYM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HYM1 PE=1 SV=1 | 97 | 252 | 3.0E-26 |
| sp|O60032|HYMA_EMENI | Conidiophore development protein hymA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hymA PE=3 SV=1 | 1 | 90 | 3.0E-18 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear export signal | 0.6663 | 0.6721 | 0.0394 | 0.1824 | 0.067 | 0.0124 | 0.1407 | 0.235 | 0.2862 | 0.0281 |
| Orthofinder run ID | 4 |
| Orthogroup | 5155 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3627 MSFLFGRARSRIAADLPKQARDYVLRLDGPNGTSKADELARVLNQMKILLQGTHETDSSPEQIYQLVTGLIDEDL LYLLASNLYRLPFESPIRLLCLAADAFTTFRELLTRHKELVPRYLSVNFDLFFEKYNGILIQSNSYVTKRQSIKL LGEILLDRSNYSVMTAYVDRGDHLKICMNLLRDDRKMVQYEGFHVFKVFVANPHKSIAVQKILLMNREKLLNFLS HFLEDRTDDEQFIDEREFLVKQIRNLPSNPIAPTR* |
| Coding | >Hirsu2|3627 ATGTCTTTCTTATTCGGTAGAGCAAGATCTCGAATTGCTGCCGATTTACCCAAGCAAGCGCGGGACTATGTTCTA CGACTCGACGGCCCCAACGGGACCTCGAAGGCGGATGAACTTGCTCGTGTACTGAACCAGATGAAGATCCTGCTT CAAGGGACACATGAAACGGACAGCTCACCCGAACAAATCTACCAATTGGTTACTGGCCTCATCGACGAGGACCTC CTTTACCTCCTCGCCAGTAATCTCTACCGTCTCCCCTTCGAATCTCCGATCCGCTTGCTCTGTCTTGCCGCCGAT GCCTTTACTACATTTCGGGAACTGCTGACTCGTCACAAGGAACTCGTTCCTCGCTATCTCTCCGTCAACTTCGAT CTCTTTTTCGAGAAATACAACGGCATTCTGATTCAGTCGAACAGCTACGTCACCAAACGACAGTCAATTAAGCTT CTCGGAGAGATCCTTCTGGACCGCTCCAACTATAGCGTAATGACGGCATATGTTGATCGGGGCGACCATCTGAAG ATATGTATGAATTTACTGCGTGATGATAGAAAGATGGTGCAGTATGAAGGATTTCACGTTTTCAAAGTCTTCGTC GCCAATCCTCATAAGTCGATTGCTGTTCAAAAGATTCTGCTCATGAATCGAGAGAAACTGTTGAACTTTCTCTCC CACTTCCTCGAAGACCGCACGGACGACGAACAATTCATTGATGAGCGAGAGTTTCTCGTCAAACAGATCAGAAAC CTGCCATCCAATCCAATCGCTCCCACACGCTAG |
| Transcript | >Hirsu2|3627 ATGTCTTTCTTATTCGGTAGAGCAAGATCTCGAATTGCTGCCGATTTACCCAAGCAAGCGCGGGACTATGTTCTA CGACTCGACGGCCCCAACGGGACCTCGAAGGCGGATGAACTTGCTCGTGTACTGAACCAGATGAAGATCCTGCTT CAAGGGACACATGAAACGGACAGCTCACCCGAACAAATCTACCAATTGGTTACTGGCCTCATCGACGAGGACCTC CTTTACCTCCTCGCCAGTAATCTCTACCGTCTCCCCTTCGAATCTCCGATCCGCTTGCTCTGTCTTGCCGCCGAT GCCTTTACTACATTTCGGGAACTGCTGACTCGTCACAAGGAACTCGTTCCTCGCTATCTCTCCGTCAACTTCGAT CTCTTTTTCGAGAAATACAACGGCATTCTGATTCAGTCGAACAGCTACGTCACCAAACGACAGTCAATTAAGCTT CTCGGAGAGATCCTTCTGGACCGCTCCAACTATAGCGTAATGACGGCATATGTTGATCGGGGCGACCATCTGAAG ATATGTATGAATTTACTGCGTGATGATAGAAAGATGGTGCAGTATGAAGGATTTCACGTTTTCAAAGTCTTCGTC GCCAATCCTCATAAGTCGATTGCTGTTCAAAAGATTCTGCTCATGAATCGAGAGAAACTGTTGAACTTTCTCTCC CACTTCCTCGAAGACCGCACGGACGACGAACAATTCATTGATGAGCGAGAGTTTCTCGTCAAACAGATCAGAAAC CTGCCATCCAATCCAATCGCTCCCACACGCTAG |
| Gene | >Hirsu2|3627 ATGTCTTTCTTATTCGGTAGAGCAAGATCTCGAATTGCTGCCGATTTACCCAAGCAAGCGCGGGACTATGTTCTA CGACTCGACGGCCCCAACGGGACCTCGAAGGTTGAATAATCAAATCTTTTTGACTTGTATCTGCGTCGTGACTAA CGCTTTGGACAGGCGGATGAACTTGCTCGTGTACTGAACCAGATGAAGATCCTGCTTCAAGGGACACATGGTCAG CATGACGCTAGGTATTGCTCTGACGACTAGCTGACTGCCCTCCACTCTCTTTAGAAACGGACAGCTCACCCGAAC AAATCTACCAATTGGTTACTGGCCTCATCGACGAGGACCTCCTTTACCTCCTCGCCAGTAATCTCTACCGTCTCC CCTTCGAATCTCGTAAGGACACCCAAGTCATTTTTTCATATGTCTTCCGTTTCCGACCAGCAGCTGCTGCTCCGA AAAGCGATCCGCTTGCTCTGTCGTACGTTGTTTGCAACCGCCCTCAAGTTCTCATTGAGTTGTGCCGAGCGTATG ATCATAAAGAAAGTGCCACGCCTGCTGGATCCGTTCTAAGGGAACTACTCAAAAATGAGGCTGCGGCGGCTATTA TTCTCTACGATGACGGTGATGAGCCAGGCTCAAGCGCCAAAGGTCTCAATGCTATTGATCGTGATCGGCCACAGA GTGGTAGAGGCGTGTTTTGGAGGTACTTTGATTGGATCGACAAAAGTTCATTCGAAGTTGCCGCCGATGCCTTTA CTACATTTCGGGTAAGCCGCCAATATCTGTTTCGCCTGCCAGAATGCGATGGATAATGGAGGAGTCCTTTGGACG AGCTGACTCATAACGACAATTGCTAGGAACTGCTGACTCGTCACAAGGAACTCGTTCCTCGCTATCTCTCCGTCA ACTTCGATCTCTTTTTCGAGAAATACAACGGCATTCTGATTCAGTCGAACAGCTACGTCACCAAACGACAGTCAA TTAAGCTTCTCGGAGAGATCCTTCTGGACCGCTCCAACTATAGCGTAATGACGGCATATGTTGATCGGGGCGACC ATCTGAAGATATGTATGAATTTACTGCGTGATGATAGAAAGATGGTGCAGTATGAAGGATTTCACGTTTTCAAAG TCTTCGTCGCCAATCCTCATAAGTCGATTGCTGTTCAAAAGATTCTGCTCATGAATCGAGAGAAACTGTTGAACT TTCTCTCCCACTTCCTCGAAGACCGCACGGACGACGAACAATTCATTGATGAGCGAGAGTTTCTCGTCAAACAGA TCAGAAACCTGCCATCCAATCCAATCGCTCCCACACGCTAG |