© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3625 |
| Gene name | |
| Location | Contig_1966:1179..2025 |
| Strand | + |
| Gene length (bp) | 846 |
| Transcript length (bp) | 846 |
| Coding sequence length (bp) | 846 |
| Protein length (aa) | 282 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.6029 | 0.494 | 0.0345 | 0.1736 | 0.2082 | 0.0021 | 0.0877 | 0.1831 | 0.0961 | 0.0215 |
| Orthofinder run ID | 4 |
| Orthogroup | 6110 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3625 MPAPATTSDPTSSSSSTDERVHKTASVETKPPSPGAEGGAMSADRPRRHSRRPRADSVSGAVFRPRPYEDIYSEQ AYLTASLQNMAVAGVDLIRQYGLVEDELRGMAASKQRRRLRKRLNLLRSQIAAAAEQEQAIFLRLSELYVEVNSR DAWYRSGREREALGGSPRQGPRAAAPEPSRCVKLDQHGSSTHLNGATPEFVPGGQRAAPSGRRPEAARASSPPSS PAALSGVAVVSDGSDDGSCDDDGPRYQYRTEEGRRPGRPRAESRLSLPSLDSVWPG* |
| Coding | >Hirsu2|3625 ATGCCGGCACCAGCCACGACATCCGATCCGACATCGTCGTCCTCGTCCACGGACGAGCGGGTGCACAAGACAGCC AGCGTGGAGACAAAGCCACCGAGTCCCGGCGCCGAAGGGGGCGCAATGTCCGCGGACCGTCCTCGGCGCCACAGC AGGCGGCCGCGGGCAGACTCGGTGTCCGGGGCCGTCTTCCGGCCGCGCCCGTACGAGGACATCTACTCGGAGCAG GCCTACCTGACCGCCTCGCTCCAGAACATGGCGGTGGCGGGGGTCGACCTGATCCGGCAGTACGGCCTGGTGGAG GACGAGCTCCGCGGCATGGCGGCGAGCAAGCAGAGGCGCCGGCTGCGCAAGCGGCTCAACCTGCTGCGGTCGCAG ATCGCCGCCGCGGCCGAGCAGGAACAGGCCATCTTCCTCCGGCTGAGCGAGCTGTACGTCGAGGTCAACAGCCGC GACGCGTGGTATCGGTCGGGCCGGGAGAGGGAGGCGCTCGGCGGCAGCCCCCGTCAGGGGCCCCGGGCCGCGGCG CCGGAGCCGTCCCGATGCGTGAAACTGGACCAGCACGGGTCCTCGACCCACCTCAACGGCGCGACGCCCGAGTTC GTCCCGGGAGGCCAACGGGCCGCGCCGAGCGGTCGTCGTCCGGAGGCGGCGCGGGCGAGCTCACCGCCGTCCAGT CCGGCGGCCTTGTCGGGCGTGGCGGTGGTGAGCGACGGGAGCGACGACGGCTCGTGCGACGACGACGGGCCGCGC TACCAATACAGGACGGAGGAGGGACGGCGACCGGGGCGGCCTCGGGCGGAGAGCCGGCTCAGTCTACCGAGCCTG GATTCGGTATGGCCCGGCTGA |
| Transcript | >Hirsu2|3625 ATGCCGGCACCAGCCACGACATCCGATCCGACATCGTCGTCCTCGTCCACGGACGAGCGGGTGCACAAGACAGCC AGCGTGGAGACAAAGCCACCGAGTCCCGGCGCCGAAGGGGGCGCAATGTCCGCGGACCGTCCTCGGCGCCACAGC AGGCGGCCGCGGGCAGACTCGGTGTCCGGGGCCGTCTTCCGGCCGCGCCCGTACGAGGACATCTACTCGGAGCAG GCCTACCTGACCGCCTCGCTCCAGAACATGGCGGTGGCGGGGGTCGACCTGATCCGGCAGTACGGCCTGGTGGAG GACGAGCTCCGCGGCATGGCGGCGAGCAAGCAGAGGCGCCGGCTGCGCAAGCGGCTCAACCTGCTGCGGTCGCAG ATCGCCGCCGCGGCCGAGCAGGAACAGGCCATCTTCCTCCGGCTGAGCGAGCTGTACGTCGAGGTCAACAGCCGC GACGCGTGGTATCGGTCGGGCCGGGAGAGGGAGGCGCTCGGCGGCAGCCCCCGTCAGGGGCCCCGGGCCGCGGCG CCGGAGCCGTCCCGATGCGTGAAACTGGACCAGCACGGGTCCTCGACCCACCTCAACGGCGCGACGCCCGAGTTC GTCCCGGGAGGCCAACGGGCCGCGCCGAGCGGTCGTCGTCCGGAGGCGGCGCGGGCGAGCTCACCGCCGTCCAGT CCGGCGGCCTTGTCGGGCGTGGCGGTGGTGAGCGACGGGAGCGACGACGGCTCGTGCGACGACGACGGGCCGCGC TACCAATACAGGACGGAGGAGGGACGGCGACCGGGGCGGCCTCGGGCGGAGAGCCGGCTCAGTCTACCGAGCCTG GATTCGGTATGGCCCGGCTGA |
| Gene | >Hirsu2|3625 ATGCCGGCACCAGCCACGACATCCGATCCGACATCGTCGTCCTCGTCCACGGACGAGCGGGTGCACAAGACAGCC AGCGTGGAGACAAAGCCACCGAGTCCCGGCGCCGAAGGGGGCGCAATGTCCGCGGACCGTCCTCGGCGCCACAGC AGGCGGCCGCGGGCAGACTCGGTGTCCGGGGCCGTCTTCCGGCCGCGCCCGTACGAGGACATCTACTCGGAGCAG GCCTACCTGACCGCCTCGCTCCAGAACATGGCGGTGGCGGGGGTCGACCTGATCCGGCAGTACGGCCTGGTGGAG GACGAGCTCCGCGGCATGGCGGCGAGCAAGCAGAGGCGCCGGCTGCGCAAGCGGCTCAACCTGCTGCGGTCGCAG ATCGCCGCCGCGGCCGAGCAGGAACAGGCCATCTTCCTCCGGCTGAGCGAGCTGTACGTCGAGGTCAACAGCCGC GACGCGTGGTATCGGTCGGGCCGGGAGAGGGAGGCGCTCGGCGGCAGCCCCCGTCAGGGGCCCCGGGCCGCGGCG CCGGAGCCGTCCCGATGCGTGAAACTGGACCAGCACGGGTCCTCGACCCACCTCAACGGCGCGACGCCCGAGTTC GTCCCGGGAGGCCAACGGGCCGCGCCGAGCGGTCGTCGTCCGGAGGCGGCGCGGGCGAGCTCACCGCCGTCCAGT CCGGCGGCCTTGTCGGGCGTGGCGGTGGTGAGCGACGGGAGCGACGACGGCTCGTGCGACGACGACGGGCCGCGC TACCAATACAGGACGGAGGAGGGACGGCGACCGGGGCGGCCTCGGGCGGAGAGCCGGCTCAGTCTACCGAGCCTG GATTCGGTATGGCCCGGCTGA |