Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3621
Gene name
LocationContig_1964:2585..3182
Strand+
Gene length (bp)597
Transcript length (bp)597
Coding sequence length (bp)597
Protein length (aa) 199

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Lysosome/Vacuole 0.7429 0.3253 0.1814 0.0587 0.2817 0.0084 0.1125 0.6207 0.2379 0.0203

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup786
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7398
Ophiocordyceps australis map64 (Brazil) OphauB2|7895
Ophiocordyceps camponoti-floridani Ophcf2|00914
Ophiocordyceps camponoti-rufipedis Ophun1|4085
Ophiocordyceps kimflemingae Ophio5|5533
Ophiocordyceps subramaniannii Hirsu2|3057
Ophiocordyceps subramaniannii Hirsu2|3621 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3621
LGLCGLSHAHWDHVHPVGAFFPNATVVCGPGSLRLTAESWPQHADSTFDGRVWDPERAELPIRELPDPAAAPDPT
WQRLGPFEHAHDLFGDGSFWIINAPGHYPGHLMALARTRNRAGQRRWALMAADAAHCYHLVQYPAAPFGDGLPVT
KTGSLHEDEATARRVIEAIAALKDAYGPELFVWPAHVDALEGIWEFDP*
Coding >Hirsu2|3621
CTGGGACTTTGCGGCCTCAGCCACGCGCACTGGGACCACGTCCACCCCGTCGGGGCCTTCTTCCCCAACGCGACG
GTCGTGTGCGGGCCGGGCTCGCTCCGGCTGACGGCCGAGTCGTGGCCGCAGCACGCCGACAGCACGTTCGACGGC
CGGGTGTGGGACCCGGAGCGGGCCGAGCTGCCGATCCGCGAGCTGCCGGACCCGGCGGCGGCTCCGGACCCGACG
TGGCAGCGGCTCGGCCCCTTCGAGCACGCGCACGACCTGTTCGGCGACGGCAGCTTCTGGATCATCAACGCGCCC
GGCCACTACCCGGGCCACCTGATGGCGCTGGCCCGGACGCGCAACCGCGCCGGCCAGCGCCGGTGGGCGCTCATG
GCCGCCGACGCCGCCCACTGCTACCACCTGGTGCAGTACCCGGCGGCGCCCTTCGGCGACGGCCTGCCCGTCACC
AAGACGGGCAGCCTCCACGAGGACGAGGCGACGGCGCGGCGCGTCATCGAGGCCATCGCCGCCCTCAAGGACGCC
TACGGGCCCGAGCTGTTTGTCTGGCCCGCCCACGTCGACGCCCTCGAGGGCATCTGGGAGTTTGATCCGTAG
Transcript >Hirsu2|3621
CTGGGACTTTGCGGCCTCAGCCACGCGCACTGGGACCACGTCCACCCCGTCGGGGCCTTCTTCCCCAACGCGACG
GTCGTGTGCGGGCCGGGCTCGCTCCGGCTGACGGCCGAGTCGTGGCCGCAGCACGCCGACAGCACGTTCGACGGC
CGGGTGTGGGACCCGGAGCGGGCCGAGCTGCCGATCCGCGAGCTGCCGGACCCGGCGGCGGCTCCGGACCCGACG
TGGCAGCGGCTCGGCCCCTTCGAGCACGCGCACGACCTGTTCGGCGACGGCAGCTTCTGGATCATCAACGCGCCC
GGCCACTACCCGGGCCACCTGATGGCGCTGGCCCGGACGCGCAACCGCGCCGGCCAGCGCCGGTGGGCGCTCATG
GCCGCCGACGCCGCCCACTGCTACCACCTGGTGCAGTACCCGGCGGCGCCCTTCGGCGACGGCCTGCCCGTCACC
AAGACGGGCAGCCTCCACGAGGACGAGGCGACGGCGCGGCGCGTCATCGAGGCCATCGCCGCCCTCAAGGACGCC
TACGGGCCCGAGCTGTTTGTCTGGCCCGCCCACGTCGACGCCCTCGAGGGCATCTGGGAGTTTGATCCGTAG
Gene >Hirsu2|3621
CTGGGACTTTGCGGCCTCAGCCACGCGCACTGGGACCACGTCCACCCCGTCGGGGCCTTCTTCCCCAACGCGACG
GTCGTGTGCGGGCCGGGCTCGCTCCGGCTGACGGCCGAGTCGTGGCCGCAGCACGCCGACAGCACGTTCGACGGC
CGGGTGTGGGACCCGGAGCGGGCCGAGCTGCCGATCCGCGAGCTGCCGGACCCGGCGGCGGCTCCGGACCCGACG
TGGCAGCGGCTCGGCCCCTTCGAGCACGCGCACGACCTGTTCGGCGACGGCAGCTTCTGGATCATCAACGCGCCC
GGCCACTACCCGGGCCACCTGATGGCGCTGGCCCGGACGCGCAACCGCGCCGGCCAGCGCCGGTGGGCGCTCATG
GCCGCCGACGCCGCCCACTGCTACCACCTGGTGCAGTACCCGGCGGCGCCCTTCGGCGACGGCCTGCCCGTCACC
AAGACGGGCAGCCTCCACGAGGACGAGGCGACGGCGCGGCGCGTCATCGAGGCCATCGCCGCCCTCAAGGACGCC
TACGGGCCCGAGCTGTTTGTCTGGCCCGCCCACGTCGACGCCCTCGAGGGCATCTGGGAGTTTGATCCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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