Protein ID | Hirsu2|3616 |
Gene name | |
Location | Contig_1962:969..2635 |
Strand | - |
Gene length (bp) | 1666 |
Transcript length (bp) | 1554 |
Coding sequence length (bp) | 1554 |
Protein length (aa) | 518 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04882 | Peroxin-3 | Peroxin-3 | 2.4E-165 | 7 | 465 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q874C0|PEX3_YARLI | Peroxisomal biogenesis factor 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX3 PE=3 SV=1 | 8 | 467 | 3.0E-67 |
sp|Q01497|PEX3_PICAN | Peroxisomal biogenesis factor 3 OS=Pichia angusta GN=PEX3 PE=3 SV=1 | 1 | 465 | 3.0E-49 |
sp|Q92262|PEX3_PICPA | Peroxisomal biogenesis factor 3 OS=Komagataella pastoris GN=PEX3 PE=1 SV=1 | 1 | 465 | 7.0E-44 |
sp|Q6BK00|PEX3_DEBHA | Peroxisomal biogenesis factor 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PEX3 PE=3 SV=1 | 1 | 468 | 6.0E-38 |
sp|P28795|PEX3_YEAST | Peroxisomal biogenesis factor 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX3 PE=1 SV=1 | 5 | 465 | 2.0E-27 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q874C0|PEX3_YARLI | Peroxisomal biogenesis factor 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX3 PE=3 SV=1 | 8 | 467 | 3.0E-67 |
sp|Q01497|PEX3_PICAN | Peroxisomal biogenesis factor 3 OS=Pichia angusta GN=PEX3 PE=3 SV=1 | 1 | 465 | 3.0E-49 |
sp|Q92262|PEX3_PICPA | Peroxisomal biogenesis factor 3 OS=Komagataella pastoris GN=PEX3 PE=1 SV=1 | 1 | 465 | 7.0E-44 |
sp|Q6BK00|PEX3_DEBHA | Peroxisomal biogenesis factor 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PEX3 PE=3 SV=1 | 1 | 468 | 6.0E-38 |
sp|P28795|PEX3_YEAST | Peroxisomal biogenesis factor 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX3 PE=1 SV=1 | 5 | 465 | 2.0E-27 |
sp|Q60HE1|PEX3_MACFA | Peroxisomal biogenesis factor 3 OS=Macaca fascicularis GN=PEX3 PE=2 SV=1 | 169 | 463 | 4.0E-25 |
sp|P56589|PEX3_HUMAN | Peroxisomal biogenesis factor 3 OS=Homo sapiens GN=PEX3 PE=1 SV=1 | 169 | 463 | 7.0E-25 |
sp|Q9JJK3|PEX3_CRILO | Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus GN=PEX3 PE=2 SV=1 | 169 | 463 | 7.0E-25 |
sp|Q9JJK4|PEX3_RAT | Peroxisomal biogenesis factor 3 OS=Rattus norvegicus GN=Pex3 PE=1 SV=1 | 169 | 463 | 7.0E-24 |
sp|A6H7C2|PEX3_BOVIN | Peroxisomal biogenesis factor 3 OS=Bos taurus GN=PEX3 PE=2 SV=1 | 169 | 463 | 9.0E-24 |
sp|Q9QXY9|PEX3_MOUSE | Peroxisomal biogenesis factor 3 OS=Mus musculus GN=Pex3 PE=1 SV=1 | 169 | 463 | 4.0E-23 |
sp|Q759H4|PEX3_ASHGO | Peroxisomal biogenesis factor 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PEX3 PE=3 SV=1 | 41 | 465 | 4.0E-22 |
sp|O94227|PEX3_KLULA | Peroxisomal biogenesis factor 3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PEX3 PE=3 SV=1 | 43 | 465 | 1.0E-21 |
sp|Q60HE1|PEX3_MACFA | Peroxisomal biogenesis factor 3 OS=Macaca fascicularis GN=PEX3 PE=2 SV=1 | 1 | 90 | 2.0E-08 |
sp|P56589|PEX3_HUMAN | Peroxisomal biogenesis factor 3 OS=Homo sapiens GN=PEX3 PE=1 SV=1 | 1 | 90 | 2.0E-08 |
sp|Q9JJK3|PEX3_CRILO | Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus GN=PEX3 PE=2 SV=1 | 1 | 90 | 3.0E-08 |
sp|Q9QXY9|PEX3_MOUSE | Peroxisomal biogenesis factor 3 OS=Mus musculus GN=Pex3 PE=1 SV=1 | 1 | 90 | 3.0E-08 |
sp|A6H7C2|PEX3_BOVIN | Peroxisomal biogenesis factor 3 OS=Bos taurus GN=PEX3 PE=2 SV=1 | 1 | 90 | 6.0E-08 |
sp|Q9JJK4|PEX3_RAT | Peroxisomal biogenesis factor 3 OS=Rattus norvegicus GN=Pex3 PE=1 SV=1 | 1 | 90 | 6.0E-08 |
sp|Q8S9K7|PEX32_ARATH | Peroxisome biogenesis protein 3-2 OS=Arabidopsis thaliana GN=PEX3-2 PE=2 SV=1 | 169 | 465 | 2.0E-07 |
sp|Q8LDG7|PEX31_ARATH | Peroxisome biogenesis protein 3-1 OS=Arabidopsis thaliana GN=PEX3-1 PE=2 SV=2 | 169 | 465 | 1.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005779 | integral component of peroxisomal membrane | Yes |
GO:0007031 | peroxisome organization | Yes |
GO:0031224 | intrinsic component of membrane | No |
GO:0016043 | cellular component organization | No |
GO:0016021 | integral component of membrane | No |
GO:0031300 | intrinsic component of organelle membrane | No |
GO:0006996 | organelle organization | No |
GO:0071840 | cellular component organization or biogenesis | No |
GO:0031301 | integral component of organelle membrane | No |
GO:0009987 | cellular process | No |
GO:0005575 | cellular_component | No |
GO:0008150 | biological_process | No |
GO:0031231 | intrinsic component of peroxisomal membrane | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion|Peroxisome | Peroxisomal targeting signal | 0.1073 | 0.1203 | 0.2105 | 0.0817 | 0.8061 | 0.0737 | 0.1716 | 0.1364 | 0.1411 | 0.7541 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 34 | 19 |
2 | 176 | 198 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 2498 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3616 MLASARRWLRKNRTPIAVGVGVVGAAYVVSQYVLAKINDARERMSSERIAKENLRRRFEQNQEDCTFTVLALLPT ATANILAVLNTEQITYEIQQIKSSAKGPRAAASDSTSPPSIADTTLTEEDGKSMASLHSESGIHASQIAAPSPLA AAGDAGHQDGGVPRARKTKRQLWDDLTISAVTRAFTLIYTLALLAMLTRVQLNLLGRRSYLSSVVSLATGAQQAT ISLENNDDDKTEHDYGSDFDTNRKYLTFSWWLLNRGWVELMGRVESAVRAVFGSLSPRDLVTFHRFGELTMEVRR LVEGATPEERRRAGWLTVVLPPREQEADVIRESGILEDNNSSAAAAAAAPRPSPAALRRLLDETADLVESPAFSH VLTLVLDASFSLLVDKKLAAEAFELPASTEAAAAPGATDPRWSKAILLPKILSVLTRQAHAIGNGMPNEYLQEME TVRAVEAFAAVVYSSNWENEMRDEGLMGAAAAQLSTERAAHGGEQSLVVLDRQGGFEGAWERATEKR* |
Coding | >Hirsu2|3616 ATGCTCGCCTCGGCCCGCCGCTGGCTTCGCAAGAACCGGACGCCCATCGCCGTGGGCGTGGGCGTCGTCGGCGCC GCCTACGTCGTCTCGCAATATGTCTTGGCCAAGATCAACGACGCCCGCGAGCGCATGAGCAGCGAGCGCATCGCC AAGGAGAACCTGCGCCGGCGGTTCGAGCAGAACCAGGAGGACTGCACCTTCACCGTCCTGGCCCTCCTGCCGACG GCGACGGCCAACATCCTCGCCGTCCTCAACACGGAGCAGATCACGTACGAGATCCAGCAGATCAAGAGCTCCGCC AAGGGCCCCCGCGCCGCCGCCAGCGACTCCACCAGCCCGCCCAGCATCGCCGACACGACGCTGACGGAGGAGGAC GGCAAGAGCATGGCCAGCTTGCACAGTGAGAGCGGCATCCACGCCAGCCAGATCGCCGCGCCCTCGCCCCTGGCC GCCGCCGGCGACGCGGGGCACCAGGACGGCGGAGTGCCGCGGGCCCGCAAGACCAAGCGCCAGCTCTGGGACGAC CTGACCATCAGCGCCGTCACGAGGGCCTTCACCCTCATCTACACCCTCGCCCTCCTGGCCATGTTGACCCGGGTC CAGCTCAACCTCCTCGGCCGCCGGAGCTACCTGTCGAGCGTCGTCTCGCTCGCCACCGGCGCCCAGCAGGCCACC ATCAGCCTGGAGAACAACGACGACGACAAGACGGAGCACGACTACGGCAGCGACTTCGACACCAACCGCAAGTAC CTCACCTTCAGCTGGTGGCTCCTCAACCGCGGCTGGGTCGAGCTGATGGGCCGCGTCGAGAGCGCCGTCCGCGCC GTCTTCGGCAGCCTCAGCCCCCGCGACCTCGTCACCTTCCACCGCTTCGGCGAGTTGACCATGGAGGTCAGGAGG CTGGTCGAGGGCGCCACGCCCGAGGAGCGGCGCCGCGCCGGCTGGCTCACCGTCGTGCTCCCGCCCCGCGAGCAG GAGGCCGACGTCATCCGGGAGTCGGGCATCCTCGAGGACAACAACTCGTCGGCCGCCGCCGCCGCCGCCGCCCCT CGGCCCTCGCCCGCCGCCCTCCGCCGCCTGCTCGACGAGACGGCCGACCTGGTCGAGTCGCCCGCCTTCTCGCAC GTCCTGACCCTCGTCCTCGACGCCTCCTTCTCCCTGCTCGTCGACAAGAAGCTGGCGGCCGAGGCCTTCGAGCTC CCCGCCTCGACGGAGGCGGCGGCCGCCCCGGGCGCGACGGACCCGCGCTGGTCCAAGGCCATACTGCTCCCCAAG ATCCTCTCGGTACTGACGCGCCAGGCACACGCCATCGGCAACGGCATGCCCAACGAGTATCTCCAGGAGATGGAG ACGGTCCGGGCCGTCGAGGCCTTCGCCGCCGTCGTCTACTCGAGCAACTGGGAGAACGAGATGCGCGACGAGGGC CTCATGGGTGCCGCCGCCGCGCAGCTGAGCACGGAACGCGCGGCCCACGGCGGCGAGCAGAGCCTCGTCGTCTTG GACCGGCAGGGCGGGTTCGAGGGCGCGTGGGAGAGGGCGACGGAGAAGAGATGA |
Transcript | >Hirsu2|3616 ATGCTCGCCTCGGCCCGCCGCTGGCTTCGCAAGAACCGGACGCCCATCGCCGTGGGCGTGGGCGTCGTCGGCGCC GCCTACGTCGTCTCGCAATATGTCTTGGCCAAGATCAACGACGCCCGCGAGCGCATGAGCAGCGAGCGCATCGCC AAGGAGAACCTGCGCCGGCGGTTCGAGCAGAACCAGGAGGACTGCACCTTCACCGTCCTGGCCCTCCTGCCGACG GCGACGGCCAACATCCTCGCCGTCCTCAACACGGAGCAGATCACGTACGAGATCCAGCAGATCAAGAGCTCCGCC AAGGGCCCCCGCGCCGCCGCCAGCGACTCCACCAGCCCGCCCAGCATCGCCGACACGACGCTGACGGAGGAGGAC GGCAAGAGCATGGCCAGCTTGCACAGTGAGAGCGGCATCCACGCCAGCCAGATCGCCGCGCCCTCGCCCCTGGCC GCCGCCGGCGACGCGGGGCACCAGGACGGCGGAGTGCCGCGGGCCCGCAAGACCAAGCGCCAGCTCTGGGACGAC CTGACCATCAGCGCCGTCACGAGGGCCTTCACCCTCATCTACACCCTCGCCCTCCTGGCCATGTTGACCCGGGTC CAGCTCAACCTCCTCGGCCGCCGGAGCTACCTGTCGAGCGTCGTCTCGCTCGCCACCGGCGCCCAGCAGGCCACC ATCAGCCTGGAGAACAACGACGACGACAAGACGGAGCACGACTACGGCAGCGACTTCGACACCAACCGCAAGTAC CTCACCTTCAGCTGGTGGCTCCTCAACCGCGGCTGGGTCGAGCTGATGGGCCGCGTCGAGAGCGCCGTCCGCGCC GTCTTCGGCAGCCTCAGCCCCCGCGACCTCGTCACCTTCCACCGCTTCGGCGAGTTGACCATGGAGGTCAGGAGG CTGGTCGAGGGCGCCACGCCCGAGGAGCGGCGCCGCGCCGGCTGGCTCACCGTCGTGCTCCCGCCCCGCGAGCAG GAGGCCGACGTCATCCGGGAGTCGGGCATCCTCGAGGACAACAACTCGTCGGCCGCCGCCGCCGCCGCCGCCCCT CGGCCCTCGCCCGCCGCCCTCCGCCGCCTGCTCGACGAGACGGCCGACCTGGTCGAGTCGCCCGCCTTCTCGCAC GTCCTGACCCTCGTCCTCGACGCCTCCTTCTCCCTGCTCGTCGACAAGAAGCTGGCGGCCGAGGCCTTCGAGCTC CCCGCCTCGACGGAGGCGGCGGCCGCCCCGGGCGCGACGGACCCGCGCTGGTCCAAGGCCATACTGCTCCCCAAG ATCCTCTCGGTACTGACGCGCCAGGCACACGCCATCGGCAACGGCATGCCCAACGAGTATCTCCAGGAGATGGAG ACGGTCCGGGCCGTCGAGGCCTTCGCCGCCGTCGTCTACTCGAGCAACTGGGAGAACGAGATGCGCGACGAGGGC CTCATGGGTGCCGCCGCCGCGCAGCTGAGCACGGAACGCGCGGCCCACGGCGGCGAGCAGAGCCTCGTCGTCTTG GACCGGCAGGGCGGGTTCGAGGGCGCGTGGGAGAGGGCGACGGAGAAGAGATGA |
Gene | >Hirsu2|3616 ATGCTCGCCTCGGCCCGCCGCTGGCTTCGCAAGAACCGGACGCCCATCGCCGTGGGCGTGGGCGTCGTCGGCGCC GCCTACGTCGTCTCGCAATATGTCTTGGCCAAGATCAACGACGCCCGCGAGCGCATGAGCAGCGAGCGCATCGCC AAGGAGAAGTGAGTCCCCCCCCCGGCGCCGTGACGAGCGGCCGGCTGACCCCCCCTGTGCTGCGCAGCCTGCGCC GGCGGTTCGAGCAGAACCAGGAGGACTGCACCTTCACCGTCCTGGCCCTCCTGCCGACGGCGACGGCCAACATCC TCGCCGTCCTCAACACGGAGCAGATCACGTACGAGATCCAGCAGATCAAGAGCTCCGCCAAGGGCCCCCGCGCCG CCGCCAGCGACTCCACCAGCCCGCCCAGCATCGCCGACACGACGCTGACGGAGGAGGACGGCAAGAGCATGGCCA GCTTGCACAGTGAGAGCGGCATCCACGCCAGCCAGATCGCCGCGCCCTCGCCCCTGGCCGCCGCCGGCGACGCGG GGCACCAGGACGGCGGAGTGCCGCGGGCCCGCAAGACCAAGCGCCAGCTCTGGGACGACCTGACCATCAGCGGTG CGCTGTCCCTGCGCTCCCCCACGGCCTGCGGCAAGCTGACAAGCGTCCAGCCGTCACGAGGGCCTTCACCCTCAT CTACACCCTCGCCCTCCTGGCCATGTTGACCCGGGTCCAGCTCAACCTCCTCGGCCGCCGGAGCTACCTGTCGAG CGTCGTCTCGCTCGCCACCGGCGCCCAGCAGGCCACCATCAGCCTGGAGAACAACGACGACGACAAGACGGAGCA CGACTACGGCAGCGACTTCGACACCAACCGCAAGTACCTCACCTTCAGCTGGTGGCTCCTCAACCGCGGCTGGGT CGAGCTGATGGGCCGCGTCGAGAGCGCCGTCCGCGCCGTCTTCGGCAGCCTCAGCCCCCGCGACCTCGTCACCTT CCACCGCTTCGGCGAGTTGACCATGGAGGTCAGGAGGCTGGTCGAGGGCGCCACGCCCGAGGAGCGGCGCCGCGC CGGCTGGCTCACCGTCGTGCTCCCGCCCCGCGAGCAGGAGGCCGACGTCATCCGGGAGTCGGGCATCCTCGAGGA CAACAACTCGTCGGCCGCCGCCGCCGCCGCCGCCCCTCGGCCCTCGCCCGCCGCCCTCCGCCGCCTGCTCGACGA GACGGCCGACCTGGTCGAGTCGCCCGCCTTCTCGCACGTCCTGACCCTCGTCCTCGACGCCTCCTTCTCCCTGCT CGTCGACAAGAAGCTGGCGGCCGAGGCCTTCGAGCTCCCCGCCTCGACGGAGGCGGCGGCCGCCCCGGGCGCGAC GGACCCGCGCTGGTCCAAGGCCATACTGCTCCCCAAGATCCTCTCGGTACTGACGCGCCAGGCACACGCCATCGG CAACGGCATGCCCAACGAGTATCTCCAGGAGATGGAGACGGTCCGGGCCGTCGAGGCCTTCGCCGCCGTCGTCTA CTCGAGCAACTGGGAGAACGAGATGCGCGACGAGGGCCTCATGGGTGCCGCCGCCGCGCAGCTGAGCACGGAACG CGCGGCCCACGGCGGCGAGCAGAGCCTCGTCGTCTTGGACCGGCAGGGCGGGTTCGAGGGCGCGTGGGAGAGGGC GACGGAGAAGAGATGA |