Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3616
Gene name
LocationContig_1962:969..2635
Strand-
Gene length (bp)1666
Transcript length (bp)1554
Coding sequence length (bp)1554
Protein length (aa) 518

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04882 Peroxin-3 Peroxin-3 2.4E-165 7 465

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q874C0|PEX3_YARLI Peroxisomal biogenesis factor 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX3 PE=3 SV=1 8 467 3.0E-67
sp|Q01497|PEX3_PICAN Peroxisomal biogenesis factor 3 OS=Pichia angusta GN=PEX3 PE=3 SV=1 1 465 3.0E-49
sp|Q92262|PEX3_PICPA Peroxisomal biogenesis factor 3 OS=Komagataella pastoris GN=PEX3 PE=1 SV=1 1 465 7.0E-44
sp|Q6BK00|PEX3_DEBHA Peroxisomal biogenesis factor 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PEX3 PE=3 SV=1 1 468 6.0E-38
sp|P28795|PEX3_YEAST Peroxisomal biogenesis factor 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX3 PE=1 SV=1 5 465 2.0E-27
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Swissprot ID Swissprot Description Start End E-value
sp|Q874C0|PEX3_YARLI Peroxisomal biogenesis factor 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX3 PE=3 SV=1 8 467 3.0E-67
sp|Q01497|PEX3_PICAN Peroxisomal biogenesis factor 3 OS=Pichia angusta GN=PEX3 PE=3 SV=1 1 465 3.0E-49
sp|Q92262|PEX3_PICPA Peroxisomal biogenesis factor 3 OS=Komagataella pastoris GN=PEX3 PE=1 SV=1 1 465 7.0E-44
sp|Q6BK00|PEX3_DEBHA Peroxisomal biogenesis factor 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PEX3 PE=3 SV=1 1 468 6.0E-38
sp|P28795|PEX3_YEAST Peroxisomal biogenesis factor 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX3 PE=1 SV=1 5 465 2.0E-27
sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 OS=Macaca fascicularis GN=PEX3 PE=2 SV=1 169 463 4.0E-25
sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 OS=Homo sapiens GN=PEX3 PE=1 SV=1 169 463 7.0E-25
sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus GN=PEX3 PE=2 SV=1 169 463 7.0E-25
sp|Q9JJK4|PEX3_RAT Peroxisomal biogenesis factor 3 OS=Rattus norvegicus GN=Pex3 PE=1 SV=1 169 463 7.0E-24
sp|A6H7C2|PEX3_BOVIN Peroxisomal biogenesis factor 3 OS=Bos taurus GN=PEX3 PE=2 SV=1 169 463 9.0E-24
sp|Q9QXY9|PEX3_MOUSE Peroxisomal biogenesis factor 3 OS=Mus musculus GN=Pex3 PE=1 SV=1 169 463 4.0E-23
sp|Q759H4|PEX3_ASHGO Peroxisomal biogenesis factor 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PEX3 PE=3 SV=1 41 465 4.0E-22
sp|O94227|PEX3_KLULA Peroxisomal biogenesis factor 3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PEX3 PE=3 SV=1 43 465 1.0E-21
sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 OS=Macaca fascicularis GN=PEX3 PE=2 SV=1 1 90 2.0E-08
sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 OS=Homo sapiens GN=PEX3 PE=1 SV=1 1 90 2.0E-08
sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus GN=PEX3 PE=2 SV=1 1 90 3.0E-08
sp|Q9QXY9|PEX3_MOUSE Peroxisomal biogenesis factor 3 OS=Mus musculus GN=Pex3 PE=1 SV=1 1 90 3.0E-08
sp|A6H7C2|PEX3_BOVIN Peroxisomal biogenesis factor 3 OS=Bos taurus GN=PEX3 PE=2 SV=1 1 90 6.0E-08
sp|Q9JJK4|PEX3_RAT Peroxisomal biogenesis factor 3 OS=Rattus norvegicus GN=Pex3 PE=1 SV=1 1 90 6.0E-08
sp|Q8S9K7|PEX32_ARATH Peroxisome biogenesis protein 3-2 OS=Arabidopsis thaliana GN=PEX3-2 PE=2 SV=1 169 465 2.0E-07
sp|Q8LDG7|PEX31_ARATH Peroxisome biogenesis protein 3-1 OS=Arabidopsis thaliana GN=PEX3-1 PE=2 SV=2 169 465 1.0E-06
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GO

GO Term Description Terminal node
GO:0005779 integral component of peroxisomal membrane Yes
GO:0007031 peroxisome organization Yes
GO:0031224 intrinsic component of membrane No
GO:0016043 cellular component organization No
GO:0016021 integral component of membrane No
GO:0031300 intrinsic component of organelle membrane No
GO:0006996 organelle organization No
GO:0071840 cellular component organization or biogenesis No
GO:0031301 integral component of organelle membrane No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0008150 biological_process No
GO:0031231 intrinsic component of peroxisomal membrane No
GO:0110165 cellular anatomical entity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion|Peroxisome Peroxisomal targeting signal 0.1073 0.1203 0.2105 0.0817 0.8061 0.0737 0.1716 0.1364 0.1411 0.7541

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 176 198 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2498
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7954
Ophiocordyceps australis map64 (Brazil) OphauB2|6171
Ophiocordyceps camponoti-floridani Ophcf2|04993
Ophiocordyceps camponoti-rufipedis Ophun1|4854
Ophiocordyceps kimflemingae Ophio5|117
Ophiocordyceps subramaniannii Hirsu2|3616 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3616
MLASARRWLRKNRTPIAVGVGVVGAAYVVSQYVLAKINDARERMSSERIAKENLRRRFEQNQEDCTFTVLALLPT
ATANILAVLNTEQITYEIQQIKSSAKGPRAAASDSTSPPSIADTTLTEEDGKSMASLHSESGIHASQIAAPSPLA
AAGDAGHQDGGVPRARKTKRQLWDDLTISAVTRAFTLIYTLALLAMLTRVQLNLLGRRSYLSSVVSLATGAQQAT
ISLENNDDDKTEHDYGSDFDTNRKYLTFSWWLLNRGWVELMGRVESAVRAVFGSLSPRDLVTFHRFGELTMEVRR
LVEGATPEERRRAGWLTVVLPPREQEADVIRESGILEDNNSSAAAAAAAPRPSPAALRRLLDETADLVESPAFSH
VLTLVLDASFSLLVDKKLAAEAFELPASTEAAAAPGATDPRWSKAILLPKILSVLTRQAHAIGNGMPNEYLQEME
TVRAVEAFAAVVYSSNWENEMRDEGLMGAAAAQLSTERAAHGGEQSLVVLDRQGGFEGAWERATEKR*
Coding >Hirsu2|3616
ATGCTCGCCTCGGCCCGCCGCTGGCTTCGCAAGAACCGGACGCCCATCGCCGTGGGCGTGGGCGTCGTCGGCGCC
GCCTACGTCGTCTCGCAATATGTCTTGGCCAAGATCAACGACGCCCGCGAGCGCATGAGCAGCGAGCGCATCGCC
AAGGAGAACCTGCGCCGGCGGTTCGAGCAGAACCAGGAGGACTGCACCTTCACCGTCCTGGCCCTCCTGCCGACG
GCGACGGCCAACATCCTCGCCGTCCTCAACACGGAGCAGATCACGTACGAGATCCAGCAGATCAAGAGCTCCGCC
AAGGGCCCCCGCGCCGCCGCCAGCGACTCCACCAGCCCGCCCAGCATCGCCGACACGACGCTGACGGAGGAGGAC
GGCAAGAGCATGGCCAGCTTGCACAGTGAGAGCGGCATCCACGCCAGCCAGATCGCCGCGCCCTCGCCCCTGGCC
GCCGCCGGCGACGCGGGGCACCAGGACGGCGGAGTGCCGCGGGCCCGCAAGACCAAGCGCCAGCTCTGGGACGAC
CTGACCATCAGCGCCGTCACGAGGGCCTTCACCCTCATCTACACCCTCGCCCTCCTGGCCATGTTGACCCGGGTC
CAGCTCAACCTCCTCGGCCGCCGGAGCTACCTGTCGAGCGTCGTCTCGCTCGCCACCGGCGCCCAGCAGGCCACC
ATCAGCCTGGAGAACAACGACGACGACAAGACGGAGCACGACTACGGCAGCGACTTCGACACCAACCGCAAGTAC
CTCACCTTCAGCTGGTGGCTCCTCAACCGCGGCTGGGTCGAGCTGATGGGCCGCGTCGAGAGCGCCGTCCGCGCC
GTCTTCGGCAGCCTCAGCCCCCGCGACCTCGTCACCTTCCACCGCTTCGGCGAGTTGACCATGGAGGTCAGGAGG
CTGGTCGAGGGCGCCACGCCCGAGGAGCGGCGCCGCGCCGGCTGGCTCACCGTCGTGCTCCCGCCCCGCGAGCAG
GAGGCCGACGTCATCCGGGAGTCGGGCATCCTCGAGGACAACAACTCGTCGGCCGCCGCCGCCGCCGCCGCCCCT
CGGCCCTCGCCCGCCGCCCTCCGCCGCCTGCTCGACGAGACGGCCGACCTGGTCGAGTCGCCCGCCTTCTCGCAC
GTCCTGACCCTCGTCCTCGACGCCTCCTTCTCCCTGCTCGTCGACAAGAAGCTGGCGGCCGAGGCCTTCGAGCTC
CCCGCCTCGACGGAGGCGGCGGCCGCCCCGGGCGCGACGGACCCGCGCTGGTCCAAGGCCATACTGCTCCCCAAG
ATCCTCTCGGTACTGACGCGCCAGGCACACGCCATCGGCAACGGCATGCCCAACGAGTATCTCCAGGAGATGGAG
ACGGTCCGGGCCGTCGAGGCCTTCGCCGCCGTCGTCTACTCGAGCAACTGGGAGAACGAGATGCGCGACGAGGGC
CTCATGGGTGCCGCCGCCGCGCAGCTGAGCACGGAACGCGCGGCCCACGGCGGCGAGCAGAGCCTCGTCGTCTTG
GACCGGCAGGGCGGGTTCGAGGGCGCGTGGGAGAGGGCGACGGAGAAGAGATGA
Transcript >Hirsu2|3616
ATGCTCGCCTCGGCCCGCCGCTGGCTTCGCAAGAACCGGACGCCCATCGCCGTGGGCGTGGGCGTCGTCGGCGCC
GCCTACGTCGTCTCGCAATATGTCTTGGCCAAGATCAACGACGCCCGCGAGCGCATGAGCAGCGAGCGCATCGCC
AAGGAGAACCTGCGCCGGCGGTTCGAGCAGAACCAGGAGGACTGCACCTTCACCGTCCTGGCCCTCCTGCCGACG
GCGACGGCCAACATCCTCGCCGTCCTCAACACGGAGCAGATCACGTACGAGATCCAGCAGATCAAGAGCTCCGCC
AAGGGCCCCCGCGCCGCCGCCAGCGACTCCACCAGCCCGCCCAGCATCGCCGACACGACGCTGACGGAGGAGGAC
GGCAAGAGCATGGCCAGCTTGCACAGTGAGAGCGGCATCCACGCCAGCCAGATCGCCGCGCCCTCGCCCCTGGCC
GCCGCCGGCGACGCGGGGCACCAGGACGGCGGAGTGCCGCGGGCCCGCAAGACCAAGCGCCAGCTCTGGGACGAC
CTGACCATCAGCGCCGTCACGAGGGCCTTCACCCTCATCTACACCCTCGCCCTCCTGGCCATGTTGACCCGGGTC
CAGCTCAACCTCCTCGGCCGCCGGAGCTACCTGTCGAGCGTCGTCTCGCTCGCCACCGGCGCCCAGCAGGCCACC
ATCAGCCTGGAGAACAACGACGACGACAAGACGGAGCACGACTACGGCAGCGACTTCGACACCAACCGCAAGTAC
CTCACCTTCAGCTGGTGGCTCCTCAACCGCGGCTGGGTCGAGCTGATGGGCCGCGTCGAGAGCGCCGTCCGCGCC
GTCTTCGGCAGCCTCAGCCCCCGCGACCTCGTCACCTTCCACCGCTTCGGCGAGTTGACCATGGAGGTCAGGAGG
CTGGTCGAGGGCGCCACGCCCGAGGAGCGGCGCCGCGCCGGCTGGCTCACCGTCGTGCTCCCGCCCCGCGAGCAG
GAGGCCGACGTCATCCGGGAGTCGGGCATCCTCGAGGACAACAACTCGTCGGCCGCCGCCGCCGCCGCCGCCCCT
CGGCCCTCGCCCGCCGCCCTCCGCCGCCTGCTCGACGAGACGGCCGACCTGGTCGAGTCGCCCGCCTTCTCGCAC
GTCCTGACCCTCGTCCTCGACGCCTCCTTCTCCCTGCTCGTCGACAAGAAGCTGGCGGCCGAGGCCTTCGAGCTC
CCCGCCTCGACGGAGGCGGCGGCCGCCCCGGGCGCGACGGACCCGCGCTGGTCCAAGGCCATACTGCTCCCCAAG
ATCCTCTCGGTACTGACGCGCCAGGCACACGCCATCGGCAACGGCATGCCCAACGAGTATCTCCAGGAGATGGAG
ACGGTCCGGGCCGTCGAGGCCTTCGCCGCCGTCGTCTACTCGAGCAACTGGGAGAACGAGATGCGCGACGAGGGC
CTCATGGGTGCCGCCGCCGCGCAGCTGAGCACGGAACGCGCGGCCCACGGCGGCGAGCAGAGCCTCGTCGTCTTG
GACCGGCAGGGCGGGTTCGAGGGCGCGTGGGAGAGGGCGACGGAGAAGAGATGA
Gene >Hirsu2|3616
ATGCTCGCCTCGGCCCGCCGCTGGCTTCGCAAGAACCGGACGCCCATCGCCGTGGGCGTGGGCGTCGTCGGCGCC
GCCTACGTCGTCTCGCAATATGTCTTGGCCAAGATCAACGACGCCCGCGAGCGCATGAGCAGCGAGCGCATCGCC
AAGGAGAAGTGAGTCCCCCCCCCGGCGCCGTGACGAGCGGCCGGCTGACCCCCCCTGTGCTGCGCAGCCTGCGCC
GGCGGTTCGAGCAGAACCAGGAGGACTGCACCTTCACCGTCCTGGCCCTCCTGCCGACGGCGACGGCCAACATCC
TCGCCGTCCTCAACACGGAGCAGATCACGTACGAGATCCAGCAGATCAAGAGCTCCGCCAAGGGCCCCCGCGCCG
CCGCCAGCGACTCCACCAGCCCGCCCAGCATCGCCGACACGACGCTGACGGAGGAGGACGGCAAGAGCATGGCCA
GCTTGCACAGTGAGAGCGGCATCCACGCCAGCCAGATCGCCGCGCCCTCGCCCCTGGCCGCCGCCGGCGACGCGG
GGCACCAGGACGGCGGAGTGCCGCGGGCCCGCAAGACCAAGCGCCAGCTCTGGGACGACCTGACCATCAGCGGTG
CGCTGTCCCTGCGCTCCCCCACGGCCTGCGGCAAGCTGACAAGCGTCCAGCCGTCACGAGGGCCTTCACCCTCAT
CTACACCCTCGCCCTCCTGGCCATGTTGACCCGGGTCCAGCTCAACCTCCTCGGCCGCCGGAGCTACCTGTCGAG
CGTCGTCTCGCTCGCCACCGGCGCCCAGCAGGCCACCATCAGCCTGGAGAACAACGACGACGACAAGACGGAGCA
CGACTACGGCAGCGACTTCGACACCAACCGCAAGTACCTCACCTTCAGCTGGTGGCTCCTCAACCGCGGCTGGGT
CGAGCTGATGGGCCGCGTCGAGAGCGCCGTCCGCGCCGTCTTCGGCAGCCTCAGCCCCCGCGACCTCGTCACCTT
CCACCGCTTCGGCGAGTTGACCATGGAGGTCAGGAGGCTGGTCGAGGGCGCCACGCCCGAGGAGCGGCGCCGCGC
CGGCTGGCTCACCGTCGTGCTCCCGCCCCGCGAGCAGGAGGCCGACGTCATCCGGGAGTCGGGCATCCTCGAGGA
CAACAACTCGTCGGCCGCCGCCGCCGCCGCCGCCCCTCGGCCCTCGCCCGCCGCCCTCCGCCGCCTGCTCGACGA
GACGGCCGACCTGGTCGAGTCGCCCGCCTTCTCGCACGTCCTGACCCTCGTCCTCGACGCCTCCTTCTCCCTGCT
CGTCGACAAGAAGCTGGCGGCCGAGGCCTTCGAGCTCCCCGCCTCGACGGAGGCGGCGGCCGCCCCGGGCGCGAC
GGACCCGCGCTGGTCCAAGGCCATACTGCTCCCCAAGATCCTCTCGGTACTGACGCGCCAGGCACACGCCATCGG
CAACGGCATGCCCAACGAGTATCTCCAGGAGATGGAGACGGTCCGGGCCGTCGAGGCCTTCGCCGCCGTCGTCTA
CTCGAGCAACTGGGAGAACGAGATGCGCGACGAGGGCCTCATGGGTGCCGCCGCCGCGCAGCTGAGCACGGAACG
CGCGGCCCACGGCGGCGAGCAGAGCCTCGTCGTCTTGGACCGGCAGGGCGGGTTCGAGGGCGCGTGGGAGAGGGC
GACGGAGAAGAGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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