Protein ID | Hirsu2|3614 |
Gene name | |
Location | Contig_1961:2361..4143 |
Strand | - |
Gene length (bp) | 1782 |
Transcript length (bp) | 1782 |
Coding sequence length (bp) | 1782 |
Protein length (aa) | 594 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01042 | Ribonuc_L-PSP | Endoribonuclease L-PSP | 2.1E-06 | 154 | 227 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9USQ7|DPH6_SCHPO | Diphthine--ammonia ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug71 PE=1 SV=1 | 19 | 339 | 1.0E-26 |
sp|Q12429|DPH6_YEAST | Diphthine--ammonia ligase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DPH6 PE=1 SV=1 | 28 | 335 | 3.0E-18 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6079 | 0.2993 | 0.0969 | 0.0909 | 0.5579 | 0.0458 | 0.2185 | 0.2771 | 0.4149 | 0.1096 |
Orthofinder run ID | 4 |
Orthogroup | 2496 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3614 LWERATSEDGLGRLGRALRRFGAAPGAVLGEGGEFETLVLDGPAPLFKKRIVVPEAGRSVVSDGGGSLWLMLRGA SLEDKADDGPRGQTPTVREPPLLDARFEAILSSVTAGAEHATAEPGADGRWLALARGPAATLTGAGELLQWSVVA DAGVAGRSIEAETALVVDKIRKALSSASRDASQITNTLIVLRRMADFSAVNEEYGKLFARPIPPSRVTVSCGDLL PPGRNVLVFVSMPRAAVARGDRSGLHVQARSYWAPANIGPYSQAVDVPVTARTRATGLRAVYVAGQIPLVPASMT LPPPSCAASLQKQIVLSLQHLWRIGAEMKVQCWTSAVAYFARASPSSSSPAEAMERRARQACRAWALAHAAPDED EAEAEVGPDPWHLRYNHEYMTLGGADAQSSTVALPDWSIFTMRQQNAPESCIPPVFAAEVQGLPRQSAVEWHAHV GLAHVPDGCAEMMRRPEVGGRRDWSAWHAVVRTAEASLVYTALARRPVDDEPAGSGDLEQALREAYRQSVRDICP EATAISSLDGPCLVYVDVAQAATPWKGAGDWDGQMPFALVPCHSIWSPEAGRLACLALFRADLVAASQ* |
Coding | >Hirsu2|3614 CTGTGGGAGCGCGCCACGAGCGAGGACGGCCTCGGCCGCCTCGGGCGGGCCCTGCGCAGGTTCGGCGCCGCCCCG GGGGCCGTCCTCGGCGAGGGCGGCGAGTTCGAGACGCTCGTCCTCGACGGGCCCGCCCCGCTCTTCAAGAAGCGC ATAGTCGTGCCCGAGGCCGGCAGGTCGGTCGTGTCCGACGGCGGCGGCTCCCTCTGGCTGATGCTGCGCGGCGCG AGCCTCGAGGACAAGGCCGACGACGGGCCGCGGGGCCAGACCCCGACCGTGCGAGAGCCCCCTCTTCTGGATGCC CGGTTCGAGGCCATCTTGTCCTCCGTGACCGCCGGGGCCGAGCACGCGACGGCGGAGCCGGGAGCAGACGGGCGG TGGCTCGCGCTCGCCCGAGGGCCTGCCGCGACGCTCACGGGTGCCGGCGAGCTCCTGCAATGGTCCGTCGTCGCC GACGCGGGCGTGGCCGGCCGCTCGATCGAGGCCGAGACGGCCCTCGTCGTCGACAAGATCAGGAAGGCGCTGTCG TCGGCCTCCCGCGACGCTTCCCAAATCACAAACACCCTCATCGTCCTGCGCCGCATGGCCGACTTCTCGGCGGTC AACGAGGAGTACGGCAAGCTGTTCGCCAGGCCGATCCCGCCGTCGCGCGTCACCGTGTCCTGCGGCGATCTGCTG CCTCCCGGGCGCAACGTGCTGGTCTTCGTCAGCATGCCCAGGGCGGCCGTGGCGCGCGGCGACAGGAGCGGGCTC CACGTCCAGGCCCGGTCCTACTGGGCCCCCGCCAACATCGGCCCCTACAGCCAGGCCGTGGACGTGCCCGTCACG GCGCGGACCCGGGCGACGGGGCTGAGGGCCGTCTACGTCGCCGGCCAGATCCCCCTCGTGCCGGCGTCGATGACG CTGCCGCCGCCGTCGTGCGCCGCGTCCCTGCAGAAGCAGATCGTGCTCTCCCTGCAGCACCTGTGGCGCATCGGC GCCGAGATGAAGGTCCAGTGCTGGACGAGCGCCGTCGCCTACTTCGCCCGGGCGTCGCCGTCGTCGTCGTCGCCG GCCGAAGCGATGGAACGCCGAGCCAGGCAAGCCTGTCGGGCCTGGGCGCTGGCCCATGCCGCTCCCGACGAGGAC GAGGCCGAGGCCGAAGTCGGCCCCGACCCGTGGCACCTCCGATACAACCACGAGTACATGACGCTTGGGGGCGCT GACGCGCAGAGCTCGACCGTCGCCCTACCCGATTGGTCCATCTTTACGATGCGACAGCAGAACGCGCCGGAATCT TGCATCCCGCCCGTCTTCGCAGCCGAGGTGCAAGGCCTCCCGCGGCAGTCGGCCGTCGAATGGCACGCCCACGTC GGGCTCGCGCACGTCCCCGACGGCTGCGCCGAGATGATGCGCCGGCCCGAGGTCGGCGGACGACGAGACTGGAGC GCCTGGCACGCCGTCGTGCGCACGGCCGAGGCCAGCCTCGTCTACACGGCACTGGCCCGCCGCCCCGTGGACGAT GAGCCTGCAGGGAGCGGCGACTTGGAGCAGGCCCTGCGCGAGGCCTACCGTCAATCGGTCCGGGACATCTGTCCC GAGGCCACCGCCATCTCGTCGCTCGACGGCCCCTGTCTCGTCTACGTGGACGTCGCCCAGGCGGCCACGCCGTGG AAGGGCGCCGGGGACTGGGACGGGCAGATGCCGTTTGCGCTGGTGCCATGCCACTCGATTTGGTCGCCCGAGGCT GGGCGGCTTGCATGCTTGGCTCTGTTCAGGGCCGACTTGGTCGCCGCCTCGCAGTAG |
Transcript | >Hirsu2|3614 CTGTGGGAGCGCGCCACGAGCGAGGACGGCCTCGGCCGCCTCGGGCGGGCCCTGCGCAGGTTCGGCGCCGCCCCG GGGGCCGTCCTCGGCGAGGGCGGCGAGTTCGAGACGCTCGTCCTCGACGGGCCCGCCCCGCTCTTCAAGAAGCGC ATAGTCGTGCCCGAGGCCGGCAGGTCGGTCGTGTCCGACGGCGGCGGCTCCCTCTGGCTGATGCTGCGCGGCGCG AGCCTCGAGGACAAGGCCGACGACGGGCCGCGGGGCCAGACCCCGACCGTGCGAGAGCCCCCTCTTCTGGATGCC CGGTTCGAGGCCATCTTGTCCTCCGTGACCGCCGGGGCCGAGCACGCGACGGCGGAGCCGGGAGCAGACGGGCGG TGGCTCGCGCTCGCCCGAGGGCCTGCCGCGACGCTCACGGGTGCCGGCGAGCTCCTGCAATGGTCCGTCGTCGCC GACGCGGGCGTGGCCGGCCGCTCGATCGAGGCCGAGACGGCCCTCGTCGTCGACAAGATCAGGAAGGCGCTGTCG TCGGCCTCCCGCGACGCTTCCCAAATCACAAACACCCTCATCGTCCTGCGCCGCATGGCCGACTTCTCGGCGGTC AACGAGGAGTACGGCAAGCTGTTCGCCAGGCCGATCCCGCCGTCGCGCGTCACCGTGTCCTGCGGCGATCTGCTG CCTCCCGGGCGCAACGTGCTGGTCTTCGTCAGCATGCCCAGGGCGGCCGTGGCGCGCGGCGACAGGAGCGGGCTC CACGTCCAGGCCCGGTCCTACTGGGCCCCCGCCAACATCGGCCCCTACAGCCAGGCCGTGGACGTGCCCGTCACG GCGCGGACCCGGGCGACGGGGCTGAGGGCCGTCTACGTCGCCGGCCAGATCCCCCTCGTGCCGGCGTCGATGACG CTGCCGCCGCCGTCGTGCGCCGCGTCCCTGCAGAAGCAGATCGTGCTCTCCCTGCAGCACCTGTGGCGCATCGGC GCCGAGATGAAGGTCCAGTGCTGGACGAGCGCCGTCGCCTACTTCGCCCGGGCGTCGCCGTCGTCGTCGTCGCCG GCCGAAGCGATGGAACGCCGAGCCAGGCAAGCCTGTCGGGCCTGGGCGCTGGCCCATGCCGCTCCCGACGAGGAC GAGGCCGAGGCCGAAGTCGGCCCCGACCCGTGGCACCTCCGATACAACCACGAGTACATGACGCTTGGGGGCGCT GACGCGCAGAGCTCGACCGTCGCCCTACCCGATTGGTCCATCTTTACGATGCGACAGCAGAACGCGCCGGAATCT TGCATCCCGCCCGTCTTCGCAGCCGAGGTGCAAGGCCTCCCGCGGCAGTCGGCCGTCGAATGGCACGCCCACGTC GGGCTCGCGCACGTCCCCGACGGCTGCGCCGAGATGATGCGCCGGCCCGAGGTCGGCGGACGACGAGACTGGAGC GCCTGGCACGCCGTCGTGCGCACGGCCGAGGCCAGCCTCGTCTACACGGCACTGGCCCGCCGCCCCGTGGACGAT GAGCCTGCAGGGAGCGGCGACTTGGAGCAGGCCCTGCGCGAGGCCTACCGTCAATCGGTCCGGGACATCTGTCCC GAGGCCACCGCCATCTCGTCGCTCGACGGCCCCTGTCTCGTCTACGTGGACGTCGCCCAGGCGGCCACGCCGTGG AAGGGCGCCGGGGACTGGGACGGGCAGATGCCGTTTGCGCTGGTGCCATGCCACTCGATTTGGTCGCCCGAGGCT GGGCGGCTTGCATGCTTGGCTCTGTTCAGGGCCGACTTGGTCGCCGCCTCGCAGTAG |
Gene | >Hirsu2|3614 CTGTGGGAGCGCGCCACGAGCGAGGACGGCCTCGGCCGCCTCGGGCGGGCCCTGCGCAGGTTCGGCGCCGCCCCG GGGGCCGTCCTCGGCGAGGGCGGCGAGTTCGAGACGCTCGTCCTCGACGGGCCCGCCCCGCTCTTCAAGAAGCGC ATAGTCGTGCCCGAGGCCGGCAGGTCGGTCGTGTCCGACGGCGGCGGCTCCCTCTGGCTGATGCTGCGCGGCGCG AGCCTCGAGGACAAGGCCGACGACGGGCCGCGGGGCCAGACCCCGACCGTGCGAGAGCCCCCTCTTCTGGATGCC CGGTTCGAGGCCATCTTGTCCTCCGTGACCGCCGGGGCCGAGCACGCGACGGCGGAGCCGGGAGCAGACGGGCGG TGGCTCGCGCTCGCCCGAGGGCCTGCCGCGACGCTCACGGGTGCCGGCGAGCTCCTGCAATGGTCCGTCGTCGCC GACGCGGGCGTGGCCGGCCGCTCGATCGAGGCCGAGACGGCCCTCGTCGTCGACAAGATCAGGAAGGCGCTGTCG TCGGCCTCCCGCGACGCTTCCCAAATCACAAACACCCTCATCGTCCTGCGCCGCATGGCCGACTTCTCGGCGGTC AACGAGGAGTACGGCAAGCTGTTCGCCAGGCCGATCCCGCCGTCGCGCGTCACCGTGTCCTGCGGCGATCTGCTG CCTCCCGGGCGCAACGTGCTGGTCTTCGTCAGCATGCCCAGGGCGGCCGTGGCGCGCGGCGACAGGAGCGGGCTC CACGTCCAGGCCCGGTCCTACTGGGCCCCCGCCAACATCGGCCCCTACAGCCAGGCCGTGGACGTGCCCGTCACG GCGCGGACCCGGGCGACGGGGCTGAGGGCCGTCTACGTCGCCGGCCAGATCCCCCTCGTGCCGGCGTCGATGACG CTGCCGCCGCCGTCGTGCGCCGCGTCCCTGCAGAAGCAGATCGTGCTCTCCCTGCAGCACCTGTGGCGCATCGGC GCCGAGATGAAGGTCCAGTGCTGGACGAGCGCCGTCGCCTACTTCGCCCGGGCGTCGCCGTCGTCGTCGTCGCCG GCCGAAGCGATGGAACGCCGAGCCAGGCAAGCCTGTCGGGCCTGGGCGCTGGCCCATGCCGCTCCCGACGAGGAC GAGGCCGAGGCCGAAGTCGGCCCCGACCCGTGGCACCTCCGATACAACCACGAGTACATGACGCTTGGGGGCGCT GACGCGCAGAGCTCGACCGTCGCCCTACCCGATTGGTCCATCTTTACGATGCGACAGCAGAACGCGCCGGAATCT TGCATCCCGCCCGTCTTCGCAGCCGAGGTGCAAGGCCTCCCGCGGCAGTCGGCCGTCGAATGGCACGCCCACGTC GGGCTCGCGCACGTCCCCGACGGCTGCGCCGAGATGATGCGCCGGCCCGAGGTCGGCGGACGACGAGACTGGAGC GCCTGGCACGCCGTCGTGCGCACGGCCGAGGCCAGCCTCGTCTACACGGCACTGGCCCGCCGCCCCGTGGACGAT GAGCCTGCAGGGAGCGGCGACTTGGAGCAGGCCCTGCGCGAGGCCTACCGTCAATCGGTCCGGGACATCTGTCCC GAGGCCACCGCCATCTCGTCGCTCGACGGCCCCTGTCTCGTCTACGTGGACGTCGCCCAGGCGGCCACGCCGTGG AAGGGCGCCGGGGACTGGGACGGGCAGATGCCGTTTGCGCTGGTGCCATGCCACTCGATTTGGTCGCCCGAGGCT GGGCGGCTTGCATGCTTGGCTCTGTTCAGGGCCGACTTGGTCGCCGCCTCGCAGTAG |