Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3613
Gene name
LocationContig_1961:801..1848
Strand-
Gene length (bp)1047
Transcript length (bp)861
Coding sequence length (bp)861
Protein length (aa) 287

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02656 DUF202 Domain of unknown function (DUF202) 1.2E-22 159 240

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

Domain # Start End Length
1 169 191 22
2 215 232 17
3 253 275 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3613
MGEGDAAQTGAGRPPSRSVSFHQRRQSTSERIDEILENARDRAESIGPAGLAPMARRRSSRTTGQQQQSGDEPSD
DETTGIVSRGSGHSYLAMQTSSRTKMMAHRRRSLDEQQRAGQGRDVGANADSAIDDEGEKKPWWRKPLGRFQSIE
LENKGSVARDHLALERTFLAWLRTSLAFASIGVAVTQLFRLNTSLMDDEGGSGTNHTTLRRLGKPLGATFLGISI
LTLLLGFRRYFRAQEWVMRGKFPASRGTIVVVGILALAIMLVSLVLVIVIHPAEGTKRVVR*
Coding >Hirsu2|3613
ATGGGCGAAGGCGACGCAGCACAGACCGGCGCGGGCAGGCCGCCCAGCAGGTCCGTGTCCTTCCATCAGCGCAGG
CAGTCGACGAGCGAGCGCATCGATGAGATACTCGAGAACGCCCGCGACCGCGCCGAGAGCATAGGACCTGCCGGC
CTGGCGCCCATGGCGCGCCGGCGGTCGTCCCGCACGACGGGGCAGCAGCAGCAGTCGGGAGACGAGCCGAGCGAC
GATGAGACGACGGGCATCGTGTCGCGGGGGTCGGGACACAGCTATCTGGCTATGCAGACGAGCTCTCGGACGAAG
ATGATGGCCCATCGCCGGCGGTCGCTCGACGAGCAACAGCGCGCAGGACAGGGCCGCGACGTCGGCGCGAATGCG
GACTCGGCCATCGACGACGAAGGCGAGAAGAAGCCGTGGTGGAGGAAGCCGCTGGGCAGGTTCCAGTCGATCGAG
CTGGAGAACAAGGGCAGCGTGGCGAGAGACCACCTGGCGCTGGAGCGGACCTTTCTCGCTTGGTTACGCACGTCG
CTAGCGTTCGCATCGATCGGGGTCGCCGTCACGCAGCTTTTCCGACTCAACACGTCGCTCATGGATGACGAAGGC
GGCAGTGGCACGAACCACACCACACTGCGGCGCCTGGGCAAGCCCCTGGGGGCCACGTTCCTGGGCATCAGCATC
CTGACGCTGCTGCTGGGCTTCCGTCGCTACTTTCGCGCGCAGGAGTGGGTGATGCGAGGAAAGTTCCCGGCAAGC
AGGGGCACCATCGTCGTGGTCGGCATCCTGGCCCTGGCCATCATGCTGGTGTCGCTCGTCCTGGTCATCGTGATT
CACCCGGCGGAGGGAACCAAGAGAGTCGTCCGGTGA
Transcript >Hirsu2|3613
ATGGGCGAAGGCGACGCAGCACAGACCGGCGCGGGCAGGCCGCCCAGCAGGTCCGTGTCCTTCCATCAGCGCAGG
CAGTCGACGAGCGAGCGCATCGATGAGATACTCGAGAACGCCCGCGACCGCGCCGAGAGCATAGGACCTGCCGGC
CTGGCGCCCATGGCGCGCCGGCGGTCGTCCCGCACGACGGGGCAGCAGCAGCAGTCGGGAGACGAGCCGAGCGAC
GATGAGACGACGGGCATCGTGTCGCGGGGGTCGGGACACAGCTATCTGGCTATGCAGACGAGCTCTCGGACGAAG
ATGATGGCCCATCGCCGGCGGTCGCTCGACGAGCAACAGCGCGCAGGACAGGGCCGCGACGTCGGCGCGAATGCG
GACTCGGCCATCGACGACGAAGGCGAGAAGAAGCCGTGGTGGAGGAAGCCGCTGGGCAGGTTCCAGTCGATCGAG
CTGGAGAACAAGGGCAGCGTGGCGAGAGACCACCTGGCGCTGGAGCGGACCTTTCTCGCTTGGTTACGCACGTCG
CTAGCGTTCGCATCGATCGGGGTCGCCGTCACGCAGCTTTTCCGACTCAACACGTCGCTCATGGATGACGAAGGC
GGCAGTGGCACGAACCACACCACACTGCGGCGCCTGGGCAAGCCCCTGGGGGCCACGTTCCTGGGCATCAGCATC
CTGACGCTGCTGCTGGGCTTCCGTCGCTACTTTCGCGCGCAGGAGTGGGTGATGCGAGGAAAGTTCCCGGCAAGC
AGGGGCACCATCGTCGTGGTCGGCATCCTGGCCCTGGCCATCATGCTGGTGTCGCTCGTCCTGGTCATCGTGATT
CACCCGGCGGAGGGAACCAAGAGAGTCGTCCGGTGA
Gene >Hirsu2|3613
ATGGGCGAAGGCGACGCAGCACAGACCGGCGCGGGCAGGCCGCCCAGCAGGTCCGTGTCCTTCCATCAGCGCAGG
CAGTCGACGAGCGAGCGCATCGATGAGATACTCGAGGTGAGCGGCCTTCCTTGTCCGTCGGCCAACGCGGGGGCG
GACGGGCATCCCGCGCCCTTGGTCCTCGTCCGAGGCCGATGGCTGACACGATGCGACCCAAGAACGCCCGCGACC
GCGCCGAGAGCATAGGACCTGCCGGCCTGGCGCCCATGGCGCGCCGGCGGTCGTCCCGCACGACGGGGCAGCAGC
AGCAGTCGGGAGACGAGCCGAGCGACGATGAGACGACGGGCATCGTGTCGCGGGGGTCGGGACACAGCTATCTGG
CTATGCAGACGAGCTCTCGGACGAAGATGATGGCCCATCGCCGGCGGTCGCTCGACGAGCAACAGCGCGCAGGAC
AGGGCCGCGACGTCGGCGCGAATGCGGACTCGGCCATCGACGACGAAGGCGAGAAGAAGCCGTGGTGGAGGAAGC
CGCTGGGCAGGTTCCAGTCGATCGAGCTGGAGAACAAGGGCAGCGTGGCGAGAGACCACCTGGCGCTGGGTGAGC
AAGACACCGCCGATGGCGCGTCCAAGATGGCTTGCTGACTCGATGCCCGCTCAACCTTGCACGCCGCCGTGGCCG
AAAGAGCGGACCTTTCTCGCTTGGTTACGCACGTCGCTAGCGTTCGCATCGATCGGGGTCGCCGTCACGCAGCTT
TTCCGACTCAACACGTCGCTCATGGATGACGAAGGCGGCAGTGGCACGAACCACACCACACTGCGGCGCCTGGGC
AAGCCCCTGGGGGCCACGTTCCTGGGCATCAGCATCCTGACGCTGCTGCTGGGCTTCCGTCGCTACTTTCGCGCG
CAGGAGTGGGTGATGCGAGGAAAGTTCCCGGCAAGCAGGGGCACCATCGTCGTGGTCGGCATCCTGGCCCTGGCC
ATCATGCTGGTGTCGCTCGTCCTGGTCATCGTGATTCACCCGGCGGAGGGAACCAAGAGAGTCGTCCGGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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