Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3612
Gene name
LocationContig_1960:3732..3999
Strand+
Gene length (bp)267
Transcript length (bp)210
Coding sequence length (bp)210
Protein length (aa) 70

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6233 0.3544 0.2474 0.169 0.2345 0.018 0.0818 0.1406 0.2081 0.1263

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup538
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6603
Ophiocordyceps australis map64 (Brazil) OphauB2|8106
Ophiocordyceps camponoti-floridani Ophcf2|06279
Ophiocordyceps camponoti-rufipedis Ophun1|3074
Ophiocordyceps camponoti-rufipedis Ophun1|4973
Ophiocordyceps kimflemingae Ophio5|1721
Ophiocordyceps subramaniannii Hirsu2|3612 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4185

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3612
MDDLARAEYPGMLAHLQPGQAVQTLNERVKRINKINLEIADWLQVPRLASISHDAPRPSLIEPSRSPIV*
Coding >Hirsu2|3612
ATGGACGACCTGGCCAGGGCCGAGTATCCCGGCATGCTGGCCCATCTGCAGCCCGGCCAGGCCGTGCAGACTCTA
AACGAGCGGGTCAAGCGCATCAACAAAATCAACCTCGAGATCGCCGACTGGCTTCAGGTACCGCGACTCGCTTCA
ATCTCCCACGACGCCCCGCGCCCGTCGCTGATTGAACCCTCTCGCTCGCCCATTGTCTAG
Transcript >Hirsu2|3612
ATGGACGACCTGGCCAGGGCCGAGTATCCCGGCATGCTGGCCCATCTGCAGCCCGGCCAGGCCGTGCAGACTCTA
AACGAGCGGGTCAAGCGCATCAACAAAATCAACCTCGAGATCGCCGACTGGCTTCAGGTACCGCGACTCGCTTCA
ATCTCCCACGACGCCCCGCGCCCGTCGCTGATTGAACCCTCTCGCTCGCCCATTGTCTAG
Gene >Hirsu2|3612
ATGGACGACCTGGCCAGGGCCGAGTATCCCGGCATGCTGGTGAGCTCGCCGTCCCCGACGCCCGCCCGCCCGTCC
GCCAGCTGACCCGTCCGCCAGGCCCATCTGCAGCCCGGCCAGGCCGTGCAGACTCTAAACGAGCGGGTCAAGCGC
ATCAACAAAATCAACCTCGAGATCGCCGACTGGCTTCAGGTACCGCGACTCGCTTCAATCTCCCACGACGCCCCG
CGCCCGTCGCTGATTGAACCCTCTCGCTCGCCCATTGTCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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