Protein ID | Hirsu2|3605 |
Gene name | |
Location | Contig_196:18429..19228 |
Strand | - |
Gene length (bp) | 799 |
Transcript length (bp) | 609 |
Coding sequence length (bp) | 609 |
Protein length (aa) | 203 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00156 | Pribosyltran | Phosphoribosyl transferase domain | 7.8E-07 | 15 | 127 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P47165|XPT1_YEAST | Xanthine phosphoribosyltransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=XPT1 PE=1 SV=1 | 3 | 199 | 1.0E-70 |
sp|O13917|HPRT_SCHPO | Hypoxanthine-guanine phosphoribosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hpt1 PE=3 SV=1 | 4 | 197 | 3.0E-66 |
sp|Q04178|HPRT_YEAST | Hypoxanthine-guanine phosphoribosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HPT1 PE=1 SV=1 | 3 | 193 | 6.0E-60 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Nuclear localization signal | 0.6858 | 0.4752 | 0.2758 | 0.0597 | 0.2219 | 0.016 | 0.1241 | 0.0414 | 0.0629 | 0.0275 |
Orthofinder run ID | 4 |
Orthogroup | 2493 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3605 MVEKIYVTYNDVHKLCQRSADRLLADFKPQLMIAIGGGGYVPARILRSFLKQPGSPNIPIQAIGLSLYESLGGTE VEAIGTKVTRTQWLDLTAIGEMENLVGKRVLIVDEVDDTRTTLEYAVKELEKDVEAARQRMGGDQPKTQFSIFVL HNKDKPKKGTLPKEMVDRYYEAAETVGDVWINYPWEAIDIDEHDGRAQSAKA* |
Coding | >Hirsu2|3605 ATGGTTGAGAAAATCTACGTGACGTATAATGATGTCCACAAGCTGTGCCAGCGGTCCGCCGACCGGCTGCTCGCC GACTTCAAGCCCCAGCTCATGATTGCCATCGGCGGCGGCGGCTACGTCCCTGCCCGCATCCTGCGCTCGTTCCTC AAGCAGCCCGGCTCGCCCAACATCCCCATCCAGGCCATCGGCCTGTCGCTCTACGAGTCCCTCGGCGGCACCGAG GTCGAGGCCATCGGCACAAAGGTCACCCGTACCCAATGGCTTGACCTGACTGCCATTGGCGAAATGGAGAACCTG GTCGGCAAGCGCGTCCTCATCGTCGACGAGGTCGACGACACGCGGACGACGCTCGAGTATGCCGTCAAGGAGCTG GAAAAGGACGTCGAGGCTGCCCGCCAGCGCATGGGCGGCGACCAGCCCAAAACCCAGTTCAGCATTTTTGTCCTT CACAACAAGGACAAGCCCAAGAAAGGCACTCTGCCCAAGGAAATGGTCGATCGGTACTACGAGGCCGCCGAGACG GTCGGCGACGTCTGGATCAATTATCCGTGGGAGGCCATCGACATCGACGAGCACGACGGACGGGCCCAAAGCGCC AAGGCTTAA |
Transcript | >Hirsu2|3605 ATGGTTGAGAAAATCTACGTGACGTATAATGATGTCCACAAGCTGTGCCAGCGGTCCGCCGACCGGCTGCTCGCC GACTTCAAGCCCCAGCTCATGATTGCCATCGGCGGCGGCGGCTACGTCCCTGCCCGCATCCTGCGCTCGTTCCTC AAGCAGCCCGGCTCGCCCAACATCCCCATCCAGGCCATCGGCCTGTCGCTCTACGAGTCCCTCGGCGGCACCGAG GTCGAGGCCATCGGCACAAAGGTCACCCGTACCCAATGGCTTGACCTGACTGCCATTGGCGAAATGGAGAACCTG GTCGGCAAGCGCGTCCTCATCGTCGACGAGGTCGACGACACGCGGACGACGCTCGAGTATGCCGTCAAGGAGCTG GAAAAGGACGTCGAGGCTGCCCGCCAGCGCATGGGCGGCGACCAGCCCAAAACCCAGTTCAGCATTTTTGTCCTT CACAACAAGGACAAGCCCAAGAAAGGCACTCTGCCCAAGGAAATGGTCGATCGGTACTACGAGGCCGCCGAGACG GTCGGCGACGTCTGGATCAATTATCCGTGGGAGGCCATCGACATCGACGAGCACGACGGACGGGCCCAAAGCGCC AAGGCTTAA |
Gene | >Hirsu2|3605 ATGGTTGAGAAAATCTACGTGACGTATAATGATGTAGGTGCCATCGCCGCCCCTTGGCCTCGACCGCCCAGTGCA ACTCGACCCATGCCGAGACGTGCCATCCAAGTGCGACCATCCGAGGCGGGAGGGCGGCTCTGACGACGTCTCGTA GGTCCACAAGCTGTGCCAGCGGTCCGCCGACCGGCTGCTCGCCGACTTCAAGCCCCAGCTCATGATTGCCATCGG CGGCGGCGGCTACGTCCCTGCCCGCATCCTGCGCTCGTTCCTCAAGCAGCCCGGCTCGCCCAACATCCCCATCCA GGCCATCGGCCTGTCGCTCTACGAGTCCCTCGGCGGCACCGAGGTCGAGGCCATCGGCACAAAGGTCACCCGTAC CCAATGGCTTGACCTGACTGCCATTGGCGAAATGGAGAACCTGGTCGGCAAGCGCGTCCTCATCGTCGACGAGGT CGACGACACGCGGACGACGCTCGAGTATGCCGTCAAGGAGCTGGAAAAGGACGTCGAGGCTGCCCGCCAGCGCAT GGGCGGCGACCAGCCCAAAACCCAGTTCAGCATTTTTGTCCTTCACGTATGCCGGCCGCTTGCCCCTCCCCATTC TCCTGCCCCCCTCCACGATATGGCTCTGACCGGATTGGTATAGAACAAGGACAAGCCCAAGAAAGGCACTCTGCC CAAGGAAATGGTCGATCGGTACTACGAGGCCGCCGAGACGGTCGGCGACGTCTGGATCAATTATCCGTGGGAGGC CATCGACATCGACGAGCACGACGGACGGGCCCAAAGCGCCAAGGCTTAA |