© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3605 |
| Gene name | |
| Location | Contig_196:18429..19228 |
| Strand | - |
| Gene length (bp) | 799 |
| Transcript length (bp) | 609 |
| Coding sequence length (bp) | 609 |
| Protein length (aa) | 203 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00156 | Pribosyltran | Phosphoribosyl transferase domain | 1.1E-07 | 13 | 127 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P47165|XPT1_YEAST | Xanthine phosphoribosyltransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=XPT1 PE=1 SV=1 | 3 | 199 | 1.0E-70 |
| sp|O13917|HPRT_SCHPO | Hypoxanthine-guanine phosphoribosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hpt1 PE=3 SV=1 | 4 | 197 | 3.0E-66 |
| sp|Q04178|HPRT_YEAST | Hypoxanthine-guanine phosphoribosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HPT1 PE=1 SV=1 | 3 | 193 | 6.0E-60 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009116 | nucleoside metabolic process | Yes |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901657 | glycosyl compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3605 MVEKIYVTYNDVHKLCQRSADRLLADFKPQLMIAIGGGGYVPARILRSFLKQPGSPNIPIQAIGLSLYESLGGTE VEAIGTKVTRTQWLDLTAIGEMENLVGKRVLIVDEVDDTRTTLEYAVKELEKDVEAARQRMGGDQPKTQFSIFVL HNKDKPKKGTLPKEMVDRYYEAAETVGDVWINYPWEAIDIDEHDGRAQSAKA* |
| Coding | >Hirsu2|3605 ATGGTTGAGAAAATCTACGTGACGTATAATGATGTCCACAAGCTGTGCCAGCGGTCCGCCGACCGGCTGCTCGCC GACTTCAAGCCCCAGCTCATGATTGCCATCGGCGGCGGCGGCTACGTCCCTGCCCGCATCCTGCGCTCGTTCCTC AAGCAGCCCGGCTCGCCCAACATCCCCATCCAGGCCATCGGCCTGTCGCTCTACGAGTCCCTCGGCGGCACCGAG GTCGAGGCCATCGGCACAAAGGTCACCCGTACCCAATGGCTTGACCTGACTGCCATTGGCGAAATGGAGAACCTG GTCGGCAAGCGCGTCCTCATCGTCGACGAGGTCGACGACACGCGGACGACGCTCGAGTATGCCGTCAAGGAGCTG GAAAAGGACGTCGAGGCTGCCCGCCAGCGCATGGGCGGCGACCAGCCCAAAACCCAGTTCAGCATTTTTGTCCTT CACAACAAGGACAAGCCCAAGAAAGGCACTCTGCCCAAGGAAATGGTCGATCGGTACTACGAGGCCGCCGAGACG GTCGGCGACGTCTGGATCAATTATCCGTGGGAGGCCATCGACATCGACGAGCACGACGGACGGGCCCAAAGCGCC AAGGCTTAA |
| Transcript | >Hirsu2|3605 ATGGTTGAGAAAATCTACGTGACGTATAATGATGTCCACAAGCTGTGCCAGCGGTCCGCCGACCGGCTGCTCGCC GACTTCAAGCCCCAGCTCATGATTGCCATCGGCGGCGGCGGCTACGTCCCTGCCCGCATCCTGCGCTCGTTCCTC AAGCAGCCCGGCTCGCCCAACATCCCCATCCAGGCCATCGGCCTGTCGCTCTACGAGTCCCTCGGCGGCACCGAG GTCGAGGCCATCGGCACAAAGGTCACCCGTACCCAATGGCTTGACCTGACTGCCATTGGCGAAATGGAGAACCTG GTCGGCAAGCGCGTCCTCATCGTCGACGAGGTCGACGACACGCGGACGACGCTCGAGTATGCCGTCAAGGAGCTG GAAAAGGACGTCGAGGCTGCCCGCCAGCGCATGGGCGGCGACCAGCCCAAAACCCAGTTCAGCATTTTTGTCCTT CACAACAAGGACAAGCCCAAGAAAGGCACTCTGCCCAAGGAAATGGTCGATCGGTACTACGAGGCCGCCGAGACG GTCGGCGACGTCTGGATCAATTATCCGTGGGAGGCCATCGACATCGACGAGCACGACGGACGGGCCCAAAGCGCC AAGGCTTAA |
| Gene | >Hirsu2|3605 ATGGTTGAGAAAATCTACGTGACGTATAATGATGTAGGTGCCATCGCCGCCCCTTGGCCTCGACCGCCCAGTGCA ACTCGACCCATGCCGAGACGTGCCATCCAAGTGCGACCATCCGAGGCGGGAGGGCGGCTCTGACGACGTCTCGTA GGTCCACAAGCTGTGCCAGCGGTCCGCCGACCGGCTGCTCGCCGACTTCAAGCCCCAGCTCATGATTGCCATCGG CGGCGGCGGCTACGTCCCTGCCCGCATCCTGCGCTCGTTCCTCAAGCAGCCCGGCTCGCCCAACATCCCCATCCA GGCCATCGGCCTGTCGCTCTACGAGTCCCTCGGCGGCACCGAGGTCGAGGCCATCGGCACAAAGGTCACCCGTAC CCAATGGCTTGACCTGACTGCCATTGGCGAAATGGAGAACCTGGTCGGCAAGCGCGTCCTCATCGTCGACGAGGT CGACGACACGCGGACGACGCTCGAGTATGCCGTCAAGGAGCTGGAAAAGGACGTCGAGGCTGCCCGCCAGCGCAT GGGCGGCGACCAGCCCAAAACCCAGTTCAGCATTTTTGTCCTTCACGTATGCCGGCCGCTTGCCCCTCCCCATTC TCCTGCCCCCCTCCACGATATGGCTCTGACCGGATTGGTATAGAACAAGGACAAGCCCAAGAAAGGCACTCTGCC CAAGGAAATGGTCGATCGGTACTACGAGGCCGCCGAGACGGTCGGCGACGTCTGGATCAATTATCCGTGGGAGGC CATCGACATCGACGAGCACGACGGACGGGCCCAAAGCGCCAAGGCTTAA |