Protein ID | Hirsu2|3601 |
Gene name | |
Location | Contig_196:8844..10842 |
Strand | - |
Gene length (bp) | 1998 |
Transcript length (bp) | 1935 |
Coding sequence length (bp) | 1935 |
Protein length (aa) | 645 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.3322 | 0.8915 | 0.1695 | 0.0332 | 0.0298 | 0.0062 | 0.0306 | 0.017 | 0.0104 | 0.0386 |
Orthofinder run ID | 4 |
Orthogroup | 2491 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3601 MEESGLKRKRVSPQTAGAANDQGAASETAGPRRKRPSFASPTKASLSRHNPEILERRRSASPAKPTGSQPVVRRA SHAGSDASLSELLTTQPAATAGNFPASDANPDQDEAREAPSERRPGTGATSKPSPAKPNPRPLPPPAPEGEDEMN PFIGHTLRRSPATGVPIPPRPEPELPPAVPDPVLTTPPRGIHSSPSRWREKAKNKKGSPLKPAPERPGTERSKTS RTTSRDASRKAARNDESSRTALLDPNTNRARQIAAYDPNMSKLKEKSELQKEIDKLKSDLKLASEENERLRLMQT SGRTVAPTNEDGIVDLLYRCLVSSEEPPRPALSQQLTQAVLNPMNLLTSGLSSAVPAVHDNRDEFENIKSHHPVP MTAEEELPYLQLFSPFSVTSRVAVLPLKPNKPVRQRHLITLRSRDVPGLFTARLEMVVNAFTLGVKELSVTSIEP SAKFELQPFADLICGGNCNRTMQRNVGVLSWAMGEWYRIATQRALFWTQLDQEFGTKEKLLESVANSRQGRPRRR QQQPDEDDESDQGSPVKQAVCDKASLIRFLGQQSFEITVPSRQDSGGESTLRLEWKIGFDWTGEARSDVAILVGV PGKWHNVDDRGTLGQIPKLFKDLIGGGQEPEEAVRTITALLAGA* |
Coding | >Hirsu2|3601 ATGGAAGAGTCTGGCCTGAAGCGCAAGCGCGTCTCGCCACAAACGGCCGGCGCCGCCAACGACCAGGGCGCAGCT TCAGAGACGGCCGGCCCACGACGCAAACGCCCGTCCTTCGCATCGCCGACCAAAGCCAGCCTCTCGCGGCACAAC CCCGAGATTCTGGAGAGGCGGCGCTCGGCATCGCCGGCAAAGCCGACAGGCTCGCAGCCCGTCGTCAGACGCGCC AGTCACGCCGGCAGCGACGCGAGCCTGTCGGAGCTCCTCACGACGCAGCCCGCGGCGACTGCTGGGAACTTCCCC GCGAGCGATGCCAACCCGGATCAGGACGAAGCGCGTGAAGCGCCGTCCGAGAGAAGGCCCGGCACGGGCGCGACG TCCAAGCCGTCGCCGGCGAAACCAAACCCGCGACCACTGCCGCCGCCTGCCCCGGAGGGAGAAGACGAGATGAAC CCCTTCATCGGCCACACGCTGCGTCGGTCCCCGGCCACTGGCGTTCCAATACCACCCCGGCCCGAGCCCGAACTC CCGCCAGCCGTGCCGGATCCGGTGTTGACGACTCCGCCGAGAGGAATCCACAGCAGCCCGTCGCGATGGAGGGAA AAGGCCAAGAATAAGAAGGGCTCCCCCTTGAAGCCGGCGCCCGAGCGGCCGGGGACAGAACGAAGCAAGACGTCC CGCACCACCTCTCGTGATGCCAGTCGCAAAGCGGCACGGAACGACGAATCGTCCCGCACAGCCCTCTTGGATCCG AATACGAACCGAGCACGCCAAATTGCCGCCTACGATCCTAACATGAGCAAGCTGAAAGAAAAGAGCGAGTTACAG AAAGAAATCGACAAGTTGAAAAGCGACCTAAAGCTGGCGAGCGAGGAGAATGAACGCTTGCGACTGATGCAGACC TCTGGACGGACAGTGGCCCCAACCAACGAAGACGGGATAGTCGATCTCCTGTACCGCTGTCTCGTCTCATCAGAA GAGCCTCCGCGGCCAGCCCTCTCGCAGCAGCTGACGCAGGCAGTGCTGAATCCGATGAATCTGCTCACTTCTGGC CTGTCATCGGCGGTGCCGGCTGTGCATGACAACCGAGACGAATTCGAGAACATCAAGTCGCATCACCCTGTTCCC ATGACCGCCGAGGAGGAGCTTCCCTACCTGCAGCTCTTCAGCCCGTTCAGCGTCACATCACGCGTTGCCGTCTTG CCCTTGAAGCCGAACAAGCCTGTGCGACAGCGACATCTCATCACCCTGCGGTCCCGGGATGTGCCCGGGCTCTTC ACGGCGCGGCTAGAGATGGTGGTCAATGCATTCACGCTCGGCGTTAAGGAGCTCAGCGTGACTTCGATCGAACCG TCGGCCAAGTTCGAGCTGCAGCCGTTCGCGGACCTGATTTGCGGTGGAAACTGCAACAGGACCATGCAGCGCAAT GTGGGAGTTCTGTCGTGGGCCATGGGGGAGTGGTACCGAATCGCAACGCAGCGAGCGCTGTTTTGGACACAACTG GACCAGGAGTTCGGAACGAAAGAGAAACTTCTCGAGTCCGTCGCCAATTCCCGACAAGGACGGCCTCGGCGGCGG CAGCAGCAGCCCGACGAAGATGACGAGTCCGACCAGGGTTCGCCGGTGAAGCAGGCTGTCTGCGACAAGGCCAGC CTGATACGATTCTTGGGCCAGCAGTCCTTCGAGATCACAGTGCCTAGCAGGCAAGATTCCGGTGGCGAATCTACA CTACGCTTGGAATGGAAGATCGGTTTTGACTGGACCGGCGAAGCACGCAGTGATGTCGCTATCTTGGTTGGCGTT CCGGGCAAGTGGCATAATGTAGATGATCGGGGGACCCTGGGCCAGATCCCGAAGCTGTTTAAAGATCTTATTGGA GGCGGGCAAGAGCCAGAAGAGGCTGTTCGAACAATCACAGCACTTCTCGCCGGAGCATAG |
Transcript | >Hirsu2|3601 ATGGAAGAGTCTGGCCTGAAGCGCAAGCGCGTCTCGCCACAAACGGCCGGCGCCGCCAACGACCAGGGCGCAGCT TCAGAGACGGCCGGCCCACGACGCAAACGCCCGTCCTTCGCATCGCCGACCAAAGCCAGCCTCTCGCGGCACAAC CCCGAGATTCTGGAGAGGCGGCGCTCGGCATCGCCGGCAAAGCCGACAGGCTCGCAGCCCGTCGTCAGACGCGCC AGTCACGCCGGCAGCGACGCGAGCCTGTCGGAGCTCCTCACGACGCAGCCCGCGGCGACTGCTGGGAACTTCCCC GCGAGCGATGCCAACCCGGATCAGGACGAAGCGCGTGAAGCGCCGTCCGAGAGAAGGCCCGGCACGGGCGCGACG TCCAAGCCGTCGCCGGCGAAACCAAACCCGCGACCACTGCCGCCGCCTGCCCCGGAGGGAGAAGACGAGATGAAC CCCTTCATCGGCCACACGCTGCGTCGGTCCCCGGCCACTGGCGTTCCAATACCACCCCGGCCCGAGCCCGAACTC CCGCCAGCCGTGCCGGATCCGGTGTTGACGACTCCGCCGAGAGGAATCCACAGCAGCCCGTCGCGATGGAGGGAA AAGGCCAAGAATAAGAAGGGCTCCCCCTTGAAGCCGGCGCCCGAGCGGCCGGGGACAGAACGAAGCAAGACGTCC CGCACCACCTCTCGTGATGCCAGTCGCAAAGCGGCACGGAACGACGAATCGTCCCGCACAGCCCTCTTGGATCCG AATACGAACCGAGCACGCCAAATTGCCGCCTACGATCCTAACATGAGCAAGCTGAAAGAAAAGAGCGAGTTACAG AAAGAAATCGACAAGTTGAAAAGCGACCTAAAGCTGGCGAGCGAGGAGAATGAACGCTTGCGACTGATGCAGACC TCTGGACGGACAGTGGCCCCAACCAACGAAGACGGGATAGTCGATCTCCTGTACCGCTGTCTCGTCTCATCAGAA GAGCCTCCGCGGCCAGCCCTCTCGCAGCAGCTGACGCAGGCAGTGCTGAATCCGATGAATCTGCTCACTTCTGGC CTGTCATCGGCGGTGCCGGCTGTGCATGACAACCGAGACGAATTCGAGAACATCAAGTCGCATCACCCTGTTCCC ATGACCGCCGAGGAGGAGCTTCCCTACCTGCAGCTCTTCAGCCCGTTCAGCGTCACATCACGCGTTGCCGTCTTG CCCTTGAAGCCGAACAAGCCTGTGCGACAGCGACATCTCATCACCCTGCGGTCCCGGGATGTGCCCGGGCTCTTC ACGGCGCGGCTAGAGATGGTGGTCAATGCATTCACGCTCGGCGTTAAGGAGCTCAGCGTGACTTCGATCGAACCG TCGGCCAAGTTCGAGCTGCAGCCGTTCGCGGACCTGATTTGCGGTGGAAACTGCAACAGGACCATGCAGCGCAAT GTGGGAGTTCTGTCGTGGGCCATGGGGGAGTGGTACCGAATCGCAACGCAGCGAGCGCTGTTTTGGACACAACTG GACCAGGAGTTCGGAACGAAAGAGAAACTTCTCGAGTCCGTCGCCAATTCCCGACAAGGACGGCCTCGGCGGCGG CAGCAGCAGCCCGACGAAGATGACGAGTCCGACCAGGGTTCGCCGGTGAAGCAGGCTGTCTGCGACAAGGCCAGC CTGATACGATTCTTGGGCCAGCAGTCCTTCGAGATCACAGTGCCTAGCAGGCAAGATTCCGGTGGCGAATCTACA CTACGCTTGGAATGGAAGATCGGTTTTGACTGGACCGGCGAAGCACGCAGTGATGTCGCTATCTTGGTTGGCGTT CCGGGCAAGTGGCATAATGTAGATGATCGGGGGACCCTGGGCCAGATCCCGAAGCTGTTTAAAGATCTTATTGGA GGCGGGCAAGAGCCAGAAGAGGCTGTTCGAACAATCACAGCACTTCTCGCCGGAGCATAG |
Gene | >Hirsu2|3601 ATGGAAGAGTCTGGCCTGAAGCGCAAGCGCGTCTCGCCACAAACGGCCGGCGCCGCCAACGACCAGGGCGCAGCT TCAGAGACGGCCGGCCCACGACGCAAACGCCCGTCCTTCGCATCGCCGACCAAAGCCAGCCTCTCGCGGCACAAC CCCGAGATTCTGGAGAGGCGGCGCTCGGCATCGCCGGCAAAGCCGACAGGCTCGCAGCCCGTCGTCAGACGCGCC AGTCACGCCGGCAGCGACGCGAGCCTGTCGGAGCTCCTCACGACGCAGCCCGCGGCGACTGCTGGGAACTTCCCC GCGAGCGATGCCAACCCGGATCAGGACGAAGCGCGTGAAGCGCCGTCCGAGAGAAGGCCCGGCACGGGCGCGACG TCCAAGCCGTCGCCGGCGAAACCAAACCCGCGACCACTGCCGCCGCCTGCCCCGGAGGGAGAAGACGAGATGAAC CCCTTCATCGGCCACACGCTGCGTCGGTCCCCGGCCACTGGCGTTCCAATACCACCCCGGCCCGAGCCCGAACTC CCGCCAGCCGTGCCGGATCCGGTGTTGACGACTCCGCCGAGAGGAATCCACAGCAGCCCGTCGCGATGGAGGGAA AAGGCCAAGAATAAGAAGGGCTCCCCCTTGAAGCCGGCGCCCGAGCGGCCGGGGACAGAACGAAGCAAGACGTCC CGCACCACCTCTCGTGATGCCAGTCGCAAAGCGGCACGGAACGACGAATCGTCCCGCACAGCCCTCTTGGATCCG AATACGAACCGAGCACGCCAAATTGCCGCCTACGATCCTAACATGAGCAAGCTGAAAGAAAAGAGCGAGTTACAG AAAGAAATCGACAAGTTGAAAAGCGACCTAAAGCTGGCGAGCGAGGAGAATGAACGCTTGCGACTGATGCAGACC TCTGGACGGACAGTGGCCCCAACCAACGAAGACGGGATAGTCGATCTCCTGTACCGCTGTCTCGTCTCATCAGAA GAGCCTCCGCGGCCAGCCCTCTCGCAGCAGCTGACGCAGGCAGTGCTGAATCCGATGAATCTGCTCACTTCTGGC CTGTCATCGGCGGTGCCGGCTGTGCATGACAACCGAGACGAATTCGAGAACATCAAGTCGCATCACCCTGTTCCC ATGACCGCCGAGGAGGAGCTTCCCTACCTGCAGCTCTTCAGCCCGTTCAGCGTCACATCACGCGTTGCCGTCTTG CCCTTGAAGCCGAACAAGCCTGTGCGACAGCGACATCTCATCACCCTGCGGTCCCGGGATGTGCCCGGGCTCTTC ACGGCGCGGCTAGAGATGGTGGTCAATGCATTCACGCTCGGCGTTAAGGAGCTCAGCGTGACTTCGATCGAACCG TCGGCCAAGTTCGAGCTGCAGCCGTTCGCGGACCTGATTTGCGGTGGAAACTGCAACAGGACCATGCAGCGCAAT GTGGGAGTTCTGTCGTGGGCCATGGGGGAGTGGTACCGAATCGCAACGCAGCGAGCGCTGTTTTGGACACAACTG GACCAGGAGTTCGGAACGAAAGAGAAACTTCTCGAGTCCGTCGCCAATTCCCGACAAGGACGGCCTCGGCGGCGG CAGCAGCAGCCCGACGAAGATGACGAGTCCGACCAGGGTTCGCCGGTGAAGCAGGCTGTCTGCGACAAGGCCAGC CTGATACGATTCTTGGGCCAGCAGTCCTTCGAGATCACAGTGCCTAGCAGGCAAGATTCCGGTGGCGAATCTACA CTACGCTTGGAATGGAAGATCGGTTTTGACTGGACCGGCGAAGCACGCAGTGATGTCGCTATCTTGGTTGGCGTT CCGGGCAAGTGTGAGTCCAGGCCATCTTTTCGCAACGGGAAGCATCACCGTCCGCTGCTAACGCAGCTCTCAGGG CATAATGTAGATGATCGGGGGACCCTGGGCCAGATCCCGAAGCTGTTTAAAGATCTTATTGGAGGCGGGCAAGAG CCAGAAGAGGCTGTTCGAACAATCACAGCACTTCTCGCCGGAGCATAG |