Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3598
Gene name
LocationContig_196:2939..3503
Strand+
Gene length (bp)564
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.5576 0.3854 0.0486 0.5146 0.2648 0.0479 0.3028 0.2239 0.0918 0.0667

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6109
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3588
Ophiocordyceps australis 1348a (Ghana) OphauG2|3589
Ophiocordyceps australis map64 (Brazil) OphauB2|6953
Ophiocordyceps kimflemingae Ophio5|5697
Ophiocordyceps subramaniannii Hirsu2|3598 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3598
MSLPRRQSISFSSTSSSSLLSTTASAAAASSFPSSSAAAAAYFQFPTPDLIELTEASLYATAGTTSAPAAPSPSP
YAADTAPSPPPSPPPPPATTHYWTSDSTRRLEYAAIDAASRGFKGWVRRNLVPECFGHRHVAFDDDTGSVRRYRL
ELEDERDEKPASSSCAAASPRRRRTWHFWSPRKTAAV*
Coding >Hirsu2|3598
ATGTCCCTTCCTCGACGACAGTCGATATCTTTCTCCTCCACCTCCTCCTCATCTTTGCTTTCCACCACTGCCTCT
GCCGCCGCCGCCTCCTCCTTTCCTTCCTCCTCCGCCGCCGCCGCCGCCTACTTCCAGTTTCCGACGCCGGACCTC
ATCGAGCTGACCGAGGCGTCTCTGTACGCCACCGCCGGCACGACGTCGGCGCCCGCGGCTCCGTCTCCGTCTCCG
TATGCCGCCGACACGGCGCCCTCCCCGCCGCCGTCGCCGCCGCCGCCCCCGGCCACCACGCACTACTGGACCAGC
GACAGCACCCGCCGGCTCGAGTACGCCGCCATCGACGCCGCCAGCCGCGGCTTCAAGGGCTGGGTCCGCCGCAAC
CTCGTGCCCGAGTGCTTCGGCCACCGCCACGTCGCCTTCGACGACGACACCGGCAGCGTGCGCCGCTACCGGCTC
GAGCTCGAGGACGAGCGCGACGAGAAGCCGGCGTCGTCATCGTGCGCCGCCGCTTCGCCGCGCCGCCGCCGGACC
TGGCACTTCTGGTCCCCCCGCAAGACCGCCGCCGTCTGA
Transcript >Hirsu2|3598
ATGTCCCTTCCTCGACGACAGTCGATATCTTTCTCCTCCACCTCCTCCTCATCTTTGCTTTCCACCACTGCCTCT
GCCGCCGCCGCCTCCTCCTTTCCTTCCTCCTCCGCCGCCGCCGCCGCCTACTTCCAGTTTCCGACGCCGGACCTC
ATCGAGCTGACCGAGGCGTCTCTGTACGCCACCGCCGGCACGACGTCGGCGCCCGCGGCTCCGTCTCCGTCTCCG
TATGCCGCCGACACGGCGCCCTCCCCGCCGCCGTCGCCGCCGCCGCCCCCGGCCACCACGCACTACTGGACCAGC
GACAGCACCCGCCGGCTCGAGTACGCCGCCATCGACGCCGCCAGCCGCGGCTTCAAGGGCTGGGTCCGCCGCAAC
CTCGTGCCCGAGTGCTTCGGCCACCGCCACGTCGCCTTCGACGACGACACCGGCAGCGTGCGCCGCTACCGGCTC
GAGCTCGAGGACGAGCGCGACGAGAAGCCGGCGTCGTCATCGTGCGCCGCCGCTTCGCCGCGCCGCCGCCGGACC
TGGCACTTCTGGTCCCCCCGCAAGACCGCCGCCGTCTGA
Gene >Hirsu2|3598
ATGTCCCTTCCTCGACGACAGTCGATATCTTTCTCCTCCACCTCCTCCTCATCTTTGCTTTCCACCACTGCCTCT
GCCGCCGCCGCCTCCTCCTTTCCTTCCTCCTCCGCCGCCGCCGCCGCCTACTTCCAGTTTCCGACGCCGGACCTC
ATCGAGCTGACCGAGGCGTCTCTGTACGCCACCGCCGGCACGACGTCGGCGCCCGCGGCTCCGTCTCCGTCTCCG
TATGCCGCCGACACGGCGCCCTCCCCGCCGCCGTCGCCGCCGCCGCCCCCGGCCACCACGCACTACTGGACCAGC
GACAGCACCCGCCGGCTCGAGTACGCCGCCATCGACGCCGCCAGCCGCGGCTTCAAGGGCTGGGTCCGCCGCAAC
CTCGTGCCCGAGTGCTTCGGCCACCGCCACGTCGCCTTCGACGACGACACCGGCAGCGTGCGCCGCTACCGGCTC
GAGCTCGAGGACGAGCGCGACGAGAAGCCGGCGTCGTCATCGTGCGCCGCCGCTTCGCCGCGCCGCCGCCGGACC
TGGCACTTCTGGTCCCCCCGCAAGACCGCCGCCGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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