© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3592 |
| Gene name | |
| Location | Contig_1956:1423..2669 |
| Strand | + |
| Gene length (bp) | 1246 |
| Transcript length (bp) | 1059 |
| Coding sequence length (bp) | 1059 |
| Protein length (aa) | 353 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00650 | CRAL_TRIO | CRAL/TRIO domain | 2.3E-44 | 204 | 349 |
| PF03765 | CRAL_TRIO_N | CRAL/TRIO, N-terminal domain | 6.0E-15 | 106 | 157 |
| PF13716 | CRAL_TRIO_2 | Divergent CRAL/TRIO domain | 3.0E-07 | 217 | 347 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10138|YAS2_SCHPO | CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1 | 6 | 349 | 1.0E-86 |
| sp|Q757H2|CSR1_ASHGO | Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2 | 7 | 351 | 3.0E-80 |
| sp|Q06705|CSR1_YEAST | Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1 | 14 | 351 | 6.0E-62 |
| sp|Q9HDZ5|YKP9_SCHPO | CRAL-TRIO domain-containing protein C589.09, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.09 PE=3 SV=1 | 116 | 349 | 4.0E-46 |
| sp|F4JVA9|SFH2_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana GN=SFH2 PE=2 SV=1 | 137 | 352 | 7.0E-18 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10138|YAS2_SCHPO | CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1 | 6 | 349 | 1.0E-86 |
| sp|Q757H2|CSR1_ASHGO | Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2 | 7 | 351 | 3.0E-80 |
| sp|Q06705|CSR1_YEAST | Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1 | 14 | 351 | 6.0E-62 |
| sp|Q9HDZ5|YKP9_SCHPO | CRAL-TRIO domain-containing protein C589.09, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.09 PE=3 SV=1 | 116 | 349 | 4.0E-46 |
| sp|F4JVA9|SFH2_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana GN=SFH2 PE=2 SV=1 | 137 | 352 | 7.0E-18 |
| sp|Q10137|SEC14_SCHPO | Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1 | 135 | 350 | 4.0E-17 |
| sp|F4JLE5|SFH1_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH1 OS=Arabidopsis thaliana GN=SFH1 PE=2 SV=1 | 77 | 343 | 5.0E-17 |
| sp|Q9UUC2|YGR1_SCHPO | CRAL-TRIO domain-containing protein C365.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.01 PE=2 SV=1 | 117 | 349 | 5.0E-17 |
| sp|Q9CWP6|MSPD2_MOUSE | Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2 PE=1 SV=2 | 205 | 351 | 1.0E-16 |
| sp|F4IHJ0|SFH8_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1 | 137 | 349 | 4.0E-16 |
| sp|Q93ZE9|SFH3_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana GN=SFH3 PE=2 SV=1 | 137 | 352 | 4.0E-16 |
| sp|Q94A34|SFH12_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH12 OS=Arabidopsis thaliana GN=SFH12 PE=2 SV=1 | 128 | 352 | 6.0E-16 |
| sp|F4HP88|SFH4_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH4 OS=Arabidopsis thaliana GN=SFH4 PE=2 SV=1 | 137 | 343 | 7.0E-16 |
| sp|Q9SIW3|SFH7_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH7 OS=Arabidopsis thaliana GN=SFH7 PE=2 SV=2 | 137 | 343 | 1.0E-15 |
| sp|Q8NHP6|MSPD2_HUMAN | Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2 PE=1 SV=1 | 205 | 351 | 8.0E-15 |
| sp|F4J7S8|SFH9_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 OS=Arabidopsis thaliana GN=SFH9 PE=2 SV=1 | 138 | 352 | 1.0E-14 |
| sp|F4JVA6|SFH6_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1 | 137 | 352 | 1.0E-14 |
| sp|Q9SI13|SFH10_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 OS=Arabidopsis thaliana GN=SFH10 PE=3 SV=1 | 137 | 352 | 1.0E-14 |
| sp|Q8GXC6|SFH5_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH5 OS=Arabidopsis thaliana GN=SFH5 PE=2 SV=1 | 137 | 349 | 3.0E-14 |
| sp|P46250|SEC14_CANAL | SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 | 135 | 330 | 4.0E-14 |
| sp|P24280|SEC14_YEAST | SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 | 135 | 325 | 7.0E-14 |
| sp|P45816|SEC14_YARLI | SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 | 135 | 334 | 1.0E-12 |
| sp|Q92503|S14L1_HUMAN | SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2 | 135 | 350 | 1.0E-12 |
| sp|Q75DK1|SEC14_ASHGO | SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 | 135 | 325 | 2.0E-12 |
| sp|Q29JQ0|RETM_DROPS | Protein real-time OS=Drosophila pseudoobscura pseudoobscura GN=retm PE=3 SV=1 | 138 | 352 | 3.0E-12 |
| sp|Q9UU99|YJX4_SCHPO | CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1 | 138 | 327 | 3.0E-12 |
| sp|Q03606|YN02_CAEEL | CRAL-TRIO domain-containing protein T23G5.2 OS=Caenorhabditis elegans GN=T23G5.2 PE=3 SV=3 | 82 | 352 | 3.0E-12 |
| sp|P33324|YKJ1_YEAST | CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 | 135 | 325 | 3.0E-12 |
| sp|Q0V9N0|S14L5_XENTR | SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1 | 86 | 352 | 4.0E-12 |
| sp|P24859|SEC14_KLULA | SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 | 119 | 349 | 5.0E-12 |
| sp|Q7PWB1|RETM_ANOGA | Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4 | 132 | 352 | 7.0E-12 |
| sp|P53989|SEC14_CANGA | SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 | 130 | 325 | 1.0E-11 |
| sp|Q9VMD6|RETM_DROME | Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2 | 138 | 352 | 2.0E-11 |
| sp|O43304|S14L5_HUMAN | SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3 | 100 | 350 | 3.0E-11 |
| sp|Q16KN5|RETM_AEDAE | Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1 | 103 | 349 | 4.0E-11 |
| sp|F4JYJ3|SFH11_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana GN=SFH11 PE=3 SV=1 | 140 | 350 | 2.0E-10 |
| sp|Q55CU8|RSC5_DICDI | Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1 | 135 | 350 | 8.0E-10 |
| sp|Q5RFR0|TTPAL_PONAB | Alpha-tocopherol transfer protein-like OS=Pongo abelii GN=TTPAL PE=2 SV=1 | 128 | 349 | 4.0E-09 |
| sp|Q9BTX7|TTPAL_HUMAN | Alpha-tocopherol transfer protein-like OS=Homo sapiens GN=TTPAL PE=1 SV=2 | 123 | 349 | 4.0E-09 |
| sp|P53860|PDR16_YEAST | Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR16 PE=1 SV=1 | 139 | 327 | 7.0E-09 |
| sp|P53844|PDR17_YEAST | Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1 | 98 | 327 | 1.0E-08 |
| sp|Q9D3D0|TTPAL_MOUSE | Alpha-tocopherol transfer protein-like OS=Mus musculus GN=Ttpal PE=1 SV=3 | 123 | 324 | 3.0E-08 |
| sp|F4K6D3|SFH14_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 OS=Arabidopsis thaliana GN=SFH14 PE=2 SV=1 | 137 | 349 | 3.0E-08 |
| sp|P41034|TTPA_RAT | Alpha-tocopherol transfer protein OS=Rattus norvegicus GN=Ttpa PE=1 SV=1 | 135 | 334 | 3.0E-07 |
| sp|Q8BWP5|TTPA_MOUSE | Alpha-tocopherol transfer protein OS=Mus musculus GN=Ttpa PE=1 SV=1 | 131 | 352 | 8.0E-07 |
| sp|P49638|TTPA_HUMAN | Alpha-tocopherol transfer protein OS=Homo sapiens GN=TTPA PE=1 SV=1 | 135 | 334 | 2.0E-06 |
| sp|Q501H5|SFH13_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 OS=Arabidopsis thaliana GN=SFH13 PE=2 SV=1 | 138 | 352 | 3.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear export signal | 0.6041 | 0.3073 | 0.0472 | 0.1283 | 0.1758 | 0.0372 | 0.4751 | 0.241 | 0.3932 | 0.0235 |
| Orthofinder run ID | 4 |
| Orthogroup | 5151 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3592 MSLSAEAPGHVGNLTPEQEEKLRRLWHAIFKLCGVADADFVANANGNGPAAADDSSGTPAHPLEEPESPHKKRFS LFRRKHTESHSASHASHAKDGVDEEDKFGQMKHFQKTLASQSPENIRETIWSMVKQDHPDALVLRFLRARKWDVD KALVMLVSAMNWRSADMNVDTDIMMNGDAGAVQDEKHGDGDAKKLASDFMAQSRMGKAFLHGTDKEGRPVCVVRV RLHKPSAQSAESLERYTVFIIETARLTLQPPVDTATIIFDMTGFSLANMDYHPVKFMIQCFEANYPESLGAVLVH NAPWVFQGIWRIIRGWLDPVVAAKVHFTNYRAGLEEFIDRSHIIKELEGDDC* |
| Coding | >Hirsu2|3592 ATGTCACTCAGCGCAGAGGCTCCCGGGCACGTGGGCAATTTGACGCCCGAGCAGGAAGAGAAGCTCCGTAGGCTG TGGCACGCCATCTTCAAGCTTTGTGGCGTGGCCGACGCCGACTTCGTCGCCAATGCCAACGGTAACGGCCCTGCT GCCGCTGACGATTCTTCGGGAACACCCGCGCATCCGTTGGAGGAGCCCGAGTCACCTCATAAGAAACGATTCAGC CTCTTTCGGCGCAAGCACACCGAGAGCCACTCTGCCTCCCATGCAAGTCATGCTAAGGATGGGGTTGACGAGGAG GACAAGTTTGGTCAAATGAAGCATTTCCAGAAGACCCTGGCGAGCCAGAGCCCAGAAAATATTCGCGAGACTATC TGGTCCATGGTCAAGCAAGACCATCCTGACGCTCTCGTCCTTCGGTTCCTACGGGCCCGCAAGTGGGATGTGGAC AAAGCCCTTGTCATGCTCGTCTCGGCTATGAACTGGCGGTCTGCTGACATGAATGTTGATACTGACATAATGATG AACGGCGACGCTGGTGCCGTTCAAGACGAGAAGCACGGCGACGGCGATGCCAAGAAGCTGGCCAGCGACTTTATG GCACAGTCTCGCATGGGCAAGGCTTTCCTGCATGGCACGGATAAGGAGGGGCGCCCCGTCTGCGTCGTTCGTGTT CGGCTGCATAAACCGAGCGCGCAGTCCGCCGAGAGTCTGGAACGCTATACGGTGTTTATCATCGAGACGGCCCGC CTGACACTTCAGCCTCCAGTCGACACAGCGACCATCATCTTCGACATGACCGGCTTTTCCCTGGCCAACATGGAC TATCATCCCGTCAAGTTCATGATCCAGTGCTTCGAAGCCAACTACCCTGAGTCTCTGGGGGCCGTTTTGGTACAC AATGCGCCATGGGTATTTCAGGGAATATGGAGAATCATTCGCGGCTGGCTCGACCCCGTAGTAGCGGCCAAGGTC CACTTCACCAACTACAGGGCCGGACTTGAGGAATTCATCGACCGCAGCCACATTATCAAGGAATTAGAAGGCGAT GATTGTTAG |
| Transcript | >Hirsu2|3592 ATGTCACTCAGCGCAGAGGCTCCCGGGCACGTGGGCAATTTGACGCCCGAGCAGGAAGAGAAGCTCCGTAGGCTG TGGCACGCCATCTTCAAGCTTTGTGGCGTGGCCGACGCCGACTTCGTCGCCAATGCCAACGGTAACGGCCCTGCT GCCGCTGACGATTCTTCGGGAACACCCGCGCATCCGTTGGAGGAGCCCGAGTCACCTCATAAGAAACGATTCAGC CTCTTTCGGCGCAAGCACACCGAGAGCCACTCTGCCTCCCATGCAAGTCATGCTAAGGATGGGGTTGACGAGGAG GACAAGTTTGGTCAAATGAAGCATTTCCAGAAGACCCTGGCGAGCCAGAGCCCAGAAAATATTCGCGAGACTATC TGGTCCATGGTCAAGCAAGACCATCCTGACGCTCTCGTCCTTCGGTTCCTACGGGCCCGCAAGTGGGATGTGGAC AAAGCCCTTGTCATGCTCGTCTCGGCTATGAACTGGCGGTCTGCTGACATGAATGTTGATACTGACATAATGATG AACGGCGACGCTGGTGCCGTTCAAGACGAGAAGCACGGCGACGGCGATGCCAAGAAGCTGGCCAGCGACTTTATG GCACAGTCTCGCATGGGCAAGGCTTTCCTGCATGGCACGGATAAGGAGGGGCGCCCCGTCTGCGTCGTTCGTGTT CGGCTGCATAAACCGAGCGCGCAGTCCGCCGAGAGTCTGGAACGCTATACGGTGTTTATCATCGAGACGGCCCGC CTGACACTTCAGCCTCCAGTCGACACAGCGACCATCATCTTCGACATGACCGGCTTTTCCCTGGCCAACATGGAC TATCATCCCGTCAAGTTCATGATCCAGTGCTTCGAAGCCAACTACCCTGAGTCTCTGGGGGCCGTTTTGGTACAC AATGCGCCATGGGTATTTCAGGGAATATGGAGAATCATTCGCGGCTGGCTCGACCCCGTAGTAGCGGCCAAGGTC CACTTCACCAACTACAGGGCCGGACTTGAGGAATTCATCGACCGCAGCCACATTATCAAGGAATTAGAAGGCGAT GATTGTTAG |
| Gene | >Hirsu2|3592 ATGTCACTCAGCGCAGAGGCTCCCGGGCACGTGGGCAATTTGACGCCCGAGCAGGAAGAGAAGCTCCGTAGGCTG TGGCACGCCATCTTCAAGCTTTGTGGCGTGGCCGACGCCGACTTCGTCGCCAATGCCAACGGTAACGGCCCTGCT GCCGCTGACGATTCTTCGGGAACACCCGCGCATCCGTTGGAGGAGCCCGAGTCACCTCATAAGAAACGATTCAGC CTCTTTCGGCGCAAGCACACCGAGAGCCACTCTGCCTCCCATGCAAGTCATGCTAAGGATGGGGTTGACGAGGAG GACAAGTTTGGTCAAATGAAGCATTTCCAGAAGACCCTGGCGAGCCAGAGCCCAGAAAATATTCGCGAGACTATC TGGTCCATGGTCAAGCAAGACCATCCTGACGCTCTCGTCCTTCGGTTCCTACGGGCCCGCAAGTGGGATGTGGAC AAAGCCCTTGTCATGCTCGTCTCGGCTATGAACTGGCGGTCTGCTGACATGAATGTTGATACTGACATAATGATG AACGGCGACGCTGGTGCCGTTCAAGACGAGAAGCACGGCGACGGCGATGCCAAGAAGCTGGCCAGCGACTTTATG GCACAGTCTCGCATGGGCAAGGCTTTCCTGCATGGCACGGATAAGGAGGGGCGCCCCGTCTGCGTCGTTCGTGTT CGGCTGCATAAACCGAGCGCGCAGTCCGCCGAGAGTCTGGAACGCTATACGGTGTTTATCATCGAGACGGCCCGC CTGACACTTCAGCCTCCAGTCGACACAGCGGTAACTCCCCCTTCAAACGCAGTGCCAAGCCGGACTTGCTGACGG CCGATTCTCAGACCATCATCTTCGACATGACCGGCTTTTCCCTGGCCAACATGGACTATCATCCCGTCAAGTTCA TGATCCAGTGCTTCGAAGCCAACTACCCTGAGTCTCTGGGGGCCGTTTTGGTACACAATGCGCCATGGGTATTTC AGGGTGAGTGGAAGTGGACGGTAAGATGGCAAGACGGCTAACTGGAACAAGGAATATGGAGAATCATTCGCGGCT GGCTCGACCCCGTAGTAGCGGCCAAGGTCCACTTCACCAACTACAGGGCCGGACTTGAGGAATTCATCGACCGCA GCCACATTATCAAGGAATTAGAAGGCGATGATGTGTGGGAATATACATACGAGGAGCCTATGGAGGGCGAAAACG ACATAATGAAGGATACAGCCACGAGAGATCGGCTCCTCAGTGTTAG |