Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3588
Gene name
LocationContig_1954:1120..2512
Strand+
Gene length (bp)1392
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5034 0.4983 0.5316 0.0605 0.1143 0.1102 0.1859 0.1053 0.0939 0.026

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9378
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|3588 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3588
MEGLCVPADAPNATGRAAAPRRRALRRFCSNPPPSRLDGRCTSIVPRPPPLCRLSKRIQSLPSRHALVASVLLSY
NLPPTHERRTLASSRIFAEWSSACRTHNSHHSDVDHHLDSDDDGDSGGDCDHLALPDESKSPPSFRRRDSSPLRP
PSTRPASPPPASPPPASTPPLFPLPYRTLLLAALRLDRPSTGPLITQPPRLSLRLSLLFSRPTQIEQKARSTRLT
ARAGAAIPIPRHASRPACLGRDDPSPAPSSLGAETVRRISLLSSRHRRRRTSKS*
Coding >Hirsu2|3588
ATGGAGGGCCTCTGCGTTCCAGCTGACGCTCCCAATGCGACAGGCCGGGCGGCTGCACCTCGCCGCCGCGCTTTG
AGGCGCTTTTGTTCCAACCCACCACCAAGCCGGCTGGACGGACGTTGCACCTCCATTGTCCCTCGACCCCCTCCA
CTGTGCCGCCTTTCGAAGCGCATCCAATCCCTCCCCTCCCGTCACGCCCTGGTCGCCTCCGTCCTCCTTTCATAC
AACCTCCCGCCCACCCACGAACGACGGACGCTCGCTTCGTCTCGCATATTCGCCGAATGGTCCAGCGCATGCAGG
ACACATAACAGCCACCACAGCGACGTCGACCATCACCTCGACAGCGACGACGACGGCGACAGCGGCGGCGACTGC
GACCACCTCGCCCTCCCAGACGAAAGCAAATCACCGCCGTCGTTTCGCCGCCGAGATTCGTCCCCTCTCCGTCCG
CCCTCGACCCGTCCGGCCTCTCCTCCTCCGGCCTCTCCTCCTCCGGCCTCGACCCCTCCTCTCTTCCCCCTACCT
TATAGGACCCTCCTTCTCGCCGCCTTGCGACTTGACCGGCCCTCGACCGGCCCGCTCATCACGCAGCCGCCTCGC
CTGAGCCTGCGCCTGAGCCTCCTCTTCTCACGCCCAACTCAAATTGAGCAAAAGGCCCGTTCGACACGGCTGACA
GCTCGTGCCGGGGCTGCCATTCCTATCCCTCGGCACGCTTCCCGTCCGGCCTGTCTCGGGCGCGACGACCCCTCT
CCCGCTCCATCGAGCCTCGGCGCCGAGACGGTGCGGCGAATTTCCCTGCTGTCGTCGCGACATCGACGTCGACGC
ACTTCGAAATCCTGA
Transcript >Hirsu2|3588
ATGGAGGGCCTCTGCGTTCCAGCTGACGCTCCCAATGCGACAGGCCGGGCGGCTGCACCTCGCCGCCGCGCTTTG
AGGCGCTTTTGTTCCAACCCACCACCAAGCCGGCTGGACGGACGTTGCACCTCCATTGTCCCTCGACCCCCTCCA
CTGTGCCGCCTTTCGAAGCGCATCCAATCCCTCCCCTCCCGTCACGCCCTGGTCGCCTCCGTCCTCCTTTCATAC
AACCTCCCGCCCACCCACGAACGACGGACGCTCGCTTCGTCTCGCATATTCGCCGAATGGTCCAGCGCATGCAGG
ACACATAACAGCCACCACAGCGACGTCGACCATCACCTCGACAGCGACGACGACGGCGACAGCGGCGGCGACTGC
GACCACCTCGCCCTCCCAGACGAAAGCAAATCACCGCCGTCGTTTCGCCGCCGAGATTCGTCCCCTCTCCGTCCG
CCCTCGACCCGTCCGGCCTCTCCTCCTCCGGCCTCTCCTCCTCCGGCCTCGACCCCTCCTCTCTTCCCCCTACCT
TATAGGACCCTCCTTCTCGCCGCCTTGCGACTTGACCGGCCCTCGACCGGCCCGCTCATCACGCAGCCGCCTCGC
CTGAGCCTGCGCCTGAGCCTCCTCTTCTCACGCCCAACTCAAATTGAGCAAAAGGCCCGTTCGACACGGCTGACA
GCTCGTGCCGGGGCTGCCATTCCTATCCCTCGGCACGCTTCCCGTCCGGCCTGTCTCGGGCGCGACGACCCCTCT
CCCGCTCCATCGAGCCTCGGCGCCGAGACGGTGCGGCGAATTTCCCTGCTGTCGTCGCGACATCGACGTCGACGC
ACTTCGAAATCCTGA
Gene >Hirsu2|3588
ATGGAGGGCCTCTGCGTTCCAGCTGACGCTCCCAATGCGACAGGCCGGGCGGCTGCACCTCGCCGCCGCGCTTTG
AGGCGCTTTTGTTCCAACCCACCACCAAGCCGGCTGGACGGACGGTGAAGAAAGCCAGGCCCGGTATATGCAGAC
TCGTCCTCGGCACATCCGTCATTTATACTGTACATGTCCAGTACCTCGCTAGGTACACGGCCGCATAAAGGCGCA
TTGTACCGTATCGACTGACGTGCCACTGCCGCCATCCGGAGACGGGGCGCCCTGCGTACTGCAAGGTACCTCCTT
GGGTAGCAACGCCTGGCCTGGACTCCGGCAGCGGCACACTGCCTTGGGCGCCTCGCTCACGCACTGAGCGGTGCT
GGGCAGCAGGATTGATAATTCGATACCCTCTACATCTACAGCGCATGTATGTACATGTACCTGCCTGGTGGGTGG
TGCCCAAAAAAGCTGGCTGCACTGTAGCCCGCCCAGTCTGGCTGACGGTACTTGACGCTACTTGTCCTGCCGCAC
CCTGCGCCCGGCAAGGAGCGACAGGCAAGGCGCCCCATCCGCCAAAACCGCCCCAAGTACCGGCGTATCGCGTAC
CGAGGCAGGTACCTCTCCTGCGCTCGAGTCCACAGACTTTCAGAACCCGGGCCTCTCCATTGGCTCCGTAGTTGC
ACCTCCATTGTCCCTCGACCCCCTCCACTGTGCCGCCTTTCGAAGCGCATCCAATCCCTCCCCTCCCGTCACGCC
CTGGTCGCCTCCGTCCTCCTTTCATACAACCTCCCGCCCACCCACGAACGACGGACGCTCGCTTCGTCTCGCATA
TTCGCCGAATGGTCCAGCGCATGCAGGACACATAACAGCCACCACAGCGACGTCGACCATCACCTCGACAGCGAC
GACGACGGCGACAGCGGCGGCGACTGCGACCACCTCGCCCTCCCAGACGAAAGCAAATCACCGCCGTCGTTTCGC
CGCCGAGATTCGTCCCCTCTCCGTCCGCCCTCGACCCGTCCGGCCTCTCCTCCTCCGGCCTCTCCTCCTCCGGCC
TCGACCCCTCCTCTCTTCCCCCTACCTTATAGGACCCTCCTTCTCGCCGCCTTGCGACTTGACCGGCCCTCGACC
GGCCCGCTCATCACGCAGCCGCCTCGCCTGAGCCTGCGCCTGAGCCTCCTCTTCTCACGCCCAACTCAAATTGAG
CAAAAGGCCCGTTCGACACGGCTGACAGCTCGTGCCGGGGCTGCCATTCCTATCCCTCGGCACGCTTCCCGTCCG
GCCTGTCTCGGGCGCGACGACCCCTCTCCCGCTCCATCGAGCCTCGGCGCCGAGACGGTGCGGCGAATTTCCCTG
CTGTCGTCGCGACATCGACGTCGACGCACTTCGAAATCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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