Protein ID | Hirsu2|3586 |
Gene name | |
Location | Contig_1953:592..1166 |
Strand | - |
Gene length (bp) | 574 |
Transcript length (bp) | 507 |
Coding sequence length (bp) | 507 |
Protein length (aa) | 169 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P46794|CBS_DICDI | Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB PE=2 SV=2 | 24 | 165 | 3.0E-08 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.8353 | 0.4557 | 0.0231 | 0.294 | 0.1105 | 0.0031 | 0.1848 | 0.2738 | 0.1148 | 0.0228 |
Orthofinder run ID | 4 |
Orthogroup | 2484 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3586 MAAAAATATTTAADQAFESSWSSRYRGATVQDLDPPAALSLTPADAISVALQACFEREYTHLTIVDGETRALLGY LSMPRLQALLEGGQVEPGDAVGAAMQRFRRRGRRYRVITMQTPLEELENFFRAGVPGGPWVQEFAVVTDLDRRFV LGVATVRDLEEFVNRRPA* |
Coding | >Hirsu2|3586 ATGGCGGCGGCGGCGGCGACGGCGACGACGACGGCGGCCGACCAGGCCTTTGAGTCGAGCTGGTCGTCGCGCTAT CGCGGGGCGACGGTGCAGGACCTGGACCCGCCGGCGGCGCTGTCGCTGACGCCGGCGGACGCCATCTCGGTGGCG CTGCAGGCGTGCTTCGAGCGCGAGTACACGCACCTGACCATCGTCGACGGCGAGACGCGCGCGCTGCTGGGCTAC CTGTCGATGCCGCGGCTGCAGGCACTGCTGGAGGGCGGGCAGGTCGAGCCGGGCGACGCCGTCGGAGCGGCGATG CAGCGCTTCCGGCGGCGCGGGCGGCGCTACCGCGTCATCACCATGCAGACGCCGCTCGAGGAGCTCGAGAACTTC TTCCGCGCCGGCGTCCCCGGCGGGCCGTGGGTGCAGGAGTTTGCCGTCGTCACCGACCTCGACCGCCGCTTCGTT CTTGGCGTCGCTACCGTCCGCGACCTCGAGGAGTTTGTCAACCGGAGGCCGGCCTGA |
Transcript | >Hirsu2|3586 ATGGCGGCGGCGGCGGCGACGGCGACGACGACGGCGGCCGACCAGGCCTTTGAGTCGAGCTGGTCGTCGCGCTAT CGCGGGGCGACGGTGCAGGACCTGGACCCGCCGGCGGCGCTGTCGCTGACGCCGGCGGACGCCATCTCGGTGGCG CTGCAGGCGTGCTTCGAGCGCGAGTACACGCACCTGACCATCGTCGACGGCGAGACGCGCGCGCTGCTGGGCTAC CTGTCGATGCCGCGGCTGCAGGCACTGCTGGAGGGCGGGCAGGTCGAGCCGGGCGACGCCGTCGGAGCGGCGATG CAGCGCTTCCGGCGGCGCGGGCGGCGCTACCGCGTCATCACCATGCAGACGCCGCTCGAGGAGCTCGAGAACTTC TTCCGCGCCGGCGTCCCCGGCGGGCCGTGGGTGCAGGAGTTTGCCGTCGTCACCGACCTCGACCGCCGCTTCGTT CTTGGCGTCGCTACCGTCCGCGACCTCGAGGAGTTTGTCAACCGGAGGCCGGCCTGA |
Gene | >Hirsu2|3586 ATGGCGGCGGCGGCGGCGACGGCGACGACGACGGCGGCCGACCAGGCCTTTGAGTCGAGCTGGTCGTCGCGCTAT CGCGGGGTGCGTCTCCCTCGTTCCCCCCTCCCCCTTGCTCGTGCGGTGAAGGTATCGACTGACGGGGTGGCAGGC GACGGTGCAGGACCTGGACCCGCCGGCGGCGCTGTCGCTGACGCCGGCGGACGCCATCTCGGTGGCGCTGCAGGC GTGCTTCGAGCGCGAGTACACGCACCTGACCATCGTCGACGGCGAGACGCGCGCGCTGCTGGGCTACCTGTCGAT GCCGCGGCTGCAGGCACTGCTGGAGGGCGGGCAGGTCGAGCCGGGCGACGCCGTCGGAGCGGCGATGCAGCGCTT CCGGCGGCGCGGGCGGCGCTACCGCGTCATCACCATGCAGACGCCGCTCGAGGAGCTCGAGAACTTCTTCCGCGC CGGCGTCCCCGGCGGGCCGTGGGTGCAGGAGTTTGCCGTCGTCACCGACCTCGACCGCCGCTTCGTTCTTGGCGT CGCTACCGTCCGCGACCTCGAGGAGTTTGTCAACCGGAGGCCGGCCTGA |