Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3586
Gene name
LocationContig_1953:592..1166
Strand-
Gene length (bp)574
Transcript length (bp)507
Coding sequence length (bp)507
Protein length (aa) 169

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P46794|CBS_DICDI Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB PE=2 SV=2 24 165 3.0E-08

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.8353 0.4557 0.0231 0.294 0.1105 0.0031 0.1848 0.2738 0.1148 0.0228

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2484
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5737
Ophiocordyceps australis map64 (Brazil) OphauB2|2241
Ophiocordyceps camponoti-floridani Ophcf2|05098
Ophiocordyceps camponoti-rufipedis Ophun1|3269
Ophiocordyceps kimflemingae Ophio5|3223
Ophiocordyceps subramaniannii Hirsu2|3586 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3586
MAAAAATATTTAADQAFESSWSSRYRGATVQDLDPPAALSLTPADAISVALQACFEREYTHLTIVDGETRALLGY
LSMPRLQALLEGGQVEPGDAVGAAMQRFRRRGRRYRVITMQTPLEELENFFRAGVPGGPWVQEFAVVTDLDRRFV
LGVATVRDLEEFVNRRPA*
Coding >Hirsu2|3586
ATGGCGGCGGCGGCGGCGACGGCGACGACGACGGCGGCCGACCAGGCCTTTGAGTCGAGCTGGTCGTCGCGCTAT
CGCGGGGCGACGGTGCAGGACCTGGACCCGCCGGCGGCGCTGTCGCTGACGCCGGCGGACGCCATCTCGGTGGCG
CTGCAGGCGTGCTTCGAGCGCGAGTACACGCACCTGACCATCGTCGACGGCGAGACGCGCGCGCTGCTGGGCTAC
CTGTCGATGCCGCGGCTGCAGGCACTGCTGGAGGGCGGGCAGGTCGAGCCGGGCGACGCCGTCGGAGCGGCGATG
CAGCGCTTCCGGCGGCGCGGGCGGCGCTACCGCGTCATCACCATGCAGACGCCGCTCGAGGAGCTCGAGAACTTC
TTCCGCGCCGGCGTCCCCGGCGGGCCGTGGGTGCAGGAGTTTGCCGTCGTCACCGACCTCGACCGCCGCTTCGTT
CTTGGCGTCGCTACCGTCCGCGACCTCGAGGAGTTTGTCAACCGGAGGCCGGCCTGA
Transcript >Hirsu2|3586
ATGGCGGCGGCGGCGGCGACGGCGACGACGACGGCGGCCGACCAGGCCTTTGAGTCGAGCTGGTCGTCGCGCTAT
CGCGGGGCGACGGTGCAGGACCTGGACCCGCCGGCGGCGCTGTCGCTGACGCCGGCGGACGCCATCTCGGTGGCG
CTGCAGGCGTGCTTCGAGCGCGAGTACACGCACCTGACCATCGTCGACGGCGAGACGCGCGCGCTGCTGGGCTAC
CTGTCGATGCCGCGGCTGCAGGCACTGCTGGAGGGCGGGCAGGTCGAGCCGGGCGACGCCGTCGGAGCGGCGATG
CAGCGCTTCCGGCGGCGCGGGCGGCGCTACCGCGTCATCACCATGCAGACGCCGCTCGAGGAGCTCGAGAACTTC
TTCCGCGCCGGCGTCCCCGGCGGGCCGTGGGTGCAGGAGTTTGCCGTCGTCACCGACCTCGACCGCCGCTTCGTT
CTTGGCGTCGCTACCGTCCGCGACCTCGAGGAGTTTGTCAACCGGAGGCCGGCCTGA
Gene >Hirsu2|3586
ATGGCGGCGGCGGCGGCGACGGCGACGACGACGGCGGCCGACCAGGCCTTTGAGTCGAGCTGGTCGTCGCGCTAT
CGCGGGGTGCGTCTCCCTCGTTCCCCCCTCCCCCTTGCTCGTGCGGTGAAGGTATCGACTGACGGGGTGGCAGGC
GACGGTGCAGGACCTGGACCCGCCGGCGGCGCTGTCGCTGACGCCGGCGGACGCCATCTCGGTGGCGCTGCAGGC
GTGCTTCGAGCGCGAGTACACGCACCTGACCATCGTCGACGGCGAGACGCGCGCGCTGCTGGGCTACCTGTCGAT
GCCGCGGCTGCAGGCACTGCTGGAGGGCGGGCAGGTCGAGCCGGGCGACGCCGTCGGAGCGGCGATGCAGCGCTT
CCGGCGGCGCGGGCGGCGCTACCGCGTCATCACCATGCAGACGCCGCTCGAGGAGCTCGAGAACTTCTTCCGCGC
CGGCGTCCCCGGCGGGCCGTGGGTGCAGGAGTTTGCCGTCGTCACCGACCTCGACCGCCGCTTCGTTCTTGGCGT
CGCTACCGTCCGCGACCTCGAGGAGTTTGTCAACCGGAGGCCGGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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