Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3584
Gene name
LocationContig_1951:2125..2448
Strand+
Gene length (bp)323
Transcript length (bp)264
Coding sequence length (bp)264
Protein length (aa) 88

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0942 0.0594 0.9093 0.2163 0.2027 0.0076 0.0444 0.1353 0.1397 0.0199

SignalP

SignalP signal predicted Location Score
Yes 1 - 23 0.999695

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup315
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03012
Ophiocordyceps camponoti-rufipedis Ophun1|1236
Ophiocordyceps kimflemingae Ophio5|4696
Ophiocordyceps kimflemingae Ophio5|500
Ophiocordyceps subramaniannii Hirsu2|1762
Ophiocordyceps subramaniannii Hirsu2|3584 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8094

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3584
MKFTALVALAGVAAAVPADLEARTGGGGGGGSKTCSASGYKQVCCNGLLNCVVQVLGSNCGNSAYCCKTDASTGG
LVNIALLNCVSL*
Coding >Hirsu2|3584
ATGAAGTTCACCGCTCTCGTCGCCCTCGCCGGTGTGGCCGCTGCCGTGCCCGCCGACCTCGAGGCCCGCACCGGC
GGCGGCGGCGGCGGCGGCAGCAAGACCTGCTCCGCCTCCGGCTACAAGCAGGTCTGCTGCAACGGCCTGCTCAAC
TGCGTCGTCCAGGTGCTCGGCAGCAACTGCGGCAACAGCGCCTACTGCTGCAAGACCGACGCCTCCACGGGCGGC
CTGGTCAACATTGCCCTCCTCAACTGCGTCAGCCTCTAA
Transcript >Hirsu2|3584
ATGAAGTTCACCGCTCTCGTCGCCCTCGCCGGTGTGGCCGCTGCCGTGCCCGCCGACCTCGAGGCCCGCACCGGC
GGCGGCGGCGGCGGCGGCAGCAAGACCTGCTCCGCCTCCGGCTACAAGCAGGTCTGCTGCAACGGCCTGCTCAAC
TGCGTCGTCCAGGTGCTCGGCAGCAACTGCGGCAACAGCGCCTACTGCTGCAAGACCGACGCCTCCACGGGCGGC
CTGGTCAACATTGCCCTCCTCAACTGCGTCAGCCTCTAA
Gene >Hirsu2|3584
ATGAAGTTCACCGCTCTCGTCGCCCTCGCCGGTGTGGCCGCTGCCGTGCCCGCCGACCTCGAGGCCCGCACCGGC
GGCGGCGGCGGCGGCGGCAGCAAGACCTGCTCCGCCTCCGGCTACAAGCAGGTCTGCTGCAACGGCCTGCTCAAC
TGCGTCGTCCAGGTGCTCGGCAGCAACTGCGGCAACAGCGCCTACTGCTGCAAGACCGACGCCTCCACGGTAAGT
CTGAGGAGAAAAGAGGACCGAGGGGGCAGAGCTGACACGGCATCGTTTGCTAGGGCGGCCTGGTCAACATTGCCC
TCCTCAACTGCGTCAGCCTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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