Protein ID | Hirsu2|3584 |
Gene name | |
Location | Contig_1951:2125..2448 |
Strand | + |
Gene length (bp) | 323 |
Transcript length (bp) | 264 |
Coding sequence length (bp) | 264 |
Protein length (aa) | 88 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0942 | 0.0594 | 0.9093 | 0.2163 | 0.2027 | 0.0076 | 0.0444 | 0.1353 | 0.1397 | 0.0199 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999695 |
Orthofinder run ID | 4 |
Orthogroup | 315 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3584 MKFTALVALAGVAAAVPADLEARTGGGGGGGSKTCSASGYKQVCCNGLLNCVVQVLGSNCGNSAYCCKTDASTGG LVNIALLNCVSL* |
Coding | >Hirsu2|3584 ATGAAGTTCACCGCTCTCGTCGCCCTCGCCGGTGTGGCCGCTGCCGTGCCCGCCGACCTCGAGGCCCGCACCGGC GGCGGCGGCGGCGGCGGCAGCAAGACCTGCTCCGCCTCCGGCTACAAGCAGGTCTGCTGCAACGGCCTGCTCAAC TGCGTCGTCCAGGTGCTCGGCAGCAACTGCGGCAACAGCGCCTACTGCTGCAAGACCGACGCCTCCACGGGCGGC CTGGTCAACATTGCCCTCCTCAACTGCGTCAGCCTCTAA |
Transcript | >Hirsu2|3584 ATGAAGTTCACCGCTCTCGTCGCCCTCGCCGGTGTGGCCGCTGCCGTGCCCGCCGACCTCGAGGCCCGCACCGGC GGCGGCGGCGGCGGCGGCAGCAAGACCTGCTCCGCCTCCGGCTACAAGCAGGTCTGCTGCAACGGCCTGCTCAAC TGCGTCGTCCAGGTGCTCGGCAGCAACTGCGGCAACAGCGCCTACTGCTGCAAGACCGACGCCTCCACGGGCGGC CTGGTCAACATTGCCCTCCTCAACTGCGTCAGCCTCTAA |
Gene | >Hirsu2|3584 ATGAAGTTCACCGCTCTCGTCGCCCTCGCCGGTGTGGCCGCTGCCGTGCCCGCCGACCTCGAGGCCCGCACCGGC GGCGGCGGCGGCGGCGGCAGCAAGACCTGCTCCGCCTCCGGCTACAAGCAGGTCTGCTGCAACGGCCTGCTCAAC TGCGTCGTCCAGGTGCTCGGCAGCAACTGCGGCAACAGCGCCTACTGCTGCAAGACCGACGCCTCCACGGTAAGT CTGAGGAGAAAAGAGGACCGAGGGGGCAGAGCTGACACGGCATCGTTTGCTAGGGCGGCCTGGTCAACATTGCCC TCCTCAACTGCGTCAGCCTCTAA |