Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3576
Gene name
LocationContig_195:8830..9346
Strand-
Gene length (bp)516
Transcript length (bp)372
Coding sequence length (bp)372
Protein length (aa) 124

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.129 0.9117 0.2255 0.0779 0.0643 0.0436 0.028 0.0017 0.0413 0.0003

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5149
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5806
Ophiocordyceps australis map64 (Brazil) OphauB2|2741
Ophiocordyceps camponoti-floridani Ophcf2|04027
Ophiocordyceps camponoti-rufipedis Ophun1|5733
Ophiocordyceps subramaniannii Hirsu2|3576 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3576
MDGRTTKSLQNQWTKVNKEISEMEANEPADGEPATPTKKKPATPRKGRPAKKAVKSELMASPDSGEEGEMEVKTP
KKRGIGSRGGAKGTPKKAKKADEDADELEAAAGVKDETVGKDEDTEQA*
Coding >Hirsu2|3576
ATGGACGGCCGCACCACAAAGTCCCTGCAGAATCAGTGGACCAAGGTAAACAAGGAGATTTCCGAGATGGAGGCC
AACGAGCCGGCCGACGGCGAGCCGGCCACGCCGACCAAGAAGAAGCCGGCCACGCCTCGCAAGGGTCGTCCCGCC
AAGAAGGCCGTCAAGTCCGAGTTGATGGCCTCTCCCGACAGCGGCGAGGAGGGAGAAATGGAGGTCAAGACTCCC
AAGAAGCGAGGGATCGGCTCTCGCGGCGGTGCGAAGGGCACGCCGAAGAAGGCCAAGAAGGCGGACGAGGACGCC
GATGAGCTCGAGGCTGCTGCCGGTGTCAAGGACGAGACGGTCGGAAAGGACGAGGACACCGAGCAGGCCTAG
Transcript >Hirsu2|3576
ATGGACGGCCGCACCACAAAGTCCCTGCAGAATCAGTGGACCAAGGTAAACAAGGAGATTTCCGAGATGGAGGCC
AACGAGCCGGCCGACGGCGAGCCGGCCACGCCGACCAAGAAGAAGCCGGCCACGCCTCGCAAGGGTCGTCCCGCC
AAGAAGGCCGTCAAGTCCGAGTTGATGGCCTCTCCCGACAGCGGCGAGGAGGGAGAAATGGAGGTCAAGACTCCC
AAGAAGCGAGGGATCGGCTCTCGCGGCGGTGCGAAGGGCACGCCGAAGAAGGCCAAGAAGGCGGACGAGGACGCC
GATGAGCTCGAGGCTGCTGCCGGTGTCAAGGACGAGACGGTCGGAAAGGACGAGGACACCGAGCAGGCCTAG
Gene >Hirsu2|3576
ATGGACGGCCGCACCACAAAGTCCCTGCAGAATCAGTGGACCAAGGTAAACAAGGAGATTTCCGAGATGGAGGCC
AACGAGCCGGCCGACGGCGAGCCGGCCACGCCGACCAAGAAGAAGCCGGCCACGCGTAAGAAGTCCCGCCCCCTC
CCCGTCCCGAGAATGGTTGAGCTCGGCTGACGAGGTGCCAGCTCGCAAGGGTCGTCCCGCCAAGAAGGCCGTCAA
GTCCGAGTTGATGGCCTCTCCCGACAGCGGCGAGGAGGGAGAAATGGAGGTCAAGACTCCCAAGAAGCGAGGGAT
CGGCTGTAAGTCTCGAAGCACACTCTCCCTTCCCATGCCCGTCCTGCCTGTCGTGAGTCTTGGCCTGCTGACGTC
TGATGTCCCGCAGCTCGCGGCGGTGCGAAGGGCACGCCGAAGAAGGCCAAGAAGGCGGACGAGGACGCCGATGAG
CTCGAGGCTGCTGCCGGTGTCAAGGACGAGACGGTCGGAAAGGACGAGGACACCGAGCAGGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail