Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3574
Gene name
LocationContig_195:46..1080
Strand-
Gene length (bp)1034
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03398 Ist1 Regulator of Vps4 activity in the MVB pathway 5.7E-59 12 173

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q3ZBV1|IST1_BOVIN IST1 homolog OS=Bos taurus GN=IST1 PE=2 SV=1 10 196 6.0E-37
sp|P53990|IST1_HUMAN IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1 10 196 9.0E-37
sp|Q568Z6|IST1_RAT IST1 homolog OS=Rattus norvegicus GN=Ist1 PE=2 SV=1 10 196 1.0E-35
sp|Q5R6G8|IST1_PONAB IST1 homolog OS=Pongo abelii GN=IST1 PE=2 SV=1 10 196 1.0E-35
sp|Q9CX00|IST1_MOUSE IST1 homolog OS=Mus musculus GN=Ist1 PE=1 SV=1 10 196 1.0E-35
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Swissprot ID Swissprot Description Start End E-value
sp|Q3ZBV1|IST1_BOVIN IST1 homolog OS=Bos taurus GN=IST1 PE=2 SV=1 10 196 6.0E-37
sp|P53990|IST1_HUMAN IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1 10 196 9.0E-37
sp|Q568Z6|IST1_RAT IST1 homolog OS=Rattus norvegicus GN=Ist1 PE=2 SV=1 10 196 1.0E-35
sp|Q5R6G8|IST1_PONAB IST1 homolog OS=Pongo abelii GN=IST1 PE=2 SV=1 10 196 1.0E-35
sp|Q9CX00|IST1_MOUSE IST1 homolog OS=Mus musculus GN=Ist1 PE=1 SV=1 10 196 1.0E-35
sp|P53843|IST1_YEAST Vacuolar protein sorting-associated protein IST1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IST1 PE=1 SV=1 1 174 9.0E-28
sp|Q54I39|IST1L_DICDI IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1 10 189 2.0E-27
sp|O74490|IST1_SCHPO Vacuolar protein sorting-associated protein ist1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ist1 PE=3 SV=1 8 183 3.0E-21
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GO

GO Term Description Terminal node
GO:0015031 protein transport Yes
GO:0033036 macromolecule localization No
GO:0008104 protein localization No
GO:0051641 cellular localization No
GO:0009987 cellular process No
GO:0070727 cellular macromolecule localization No
GO:0051179 localization No
GO:0071702 organic substance transport No
GO:0071705 nitrogen compound transport No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0045184 establishment of protein localization No
GO:0006810 transport No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.721 0.486 0.0904 0.0471 0.1741 0.0014 0.1176 0.1571 0.195 0.1611

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2475
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5808
Ophiocordyceps australis map64 (Brazil) OphauB2|2739
Ophiocordyceps camponoti-floridani Ophcf2|04029
Ophiocordyceps camponoti-rufipedis Ophun1|1434
Ophiocordyceps kimflemingae Ophio5|3964
Ophiocordyceps subramaniannii Hirsu2|3574 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3574
MAPQATLVTRLKVQLKLAIARLRMVQQRDEQLGKTHRRAMAQLLEAGKVDSATIRVENIIRADITTELHEMLELY
CELLLARAGLLEGAGCDPGLEEAVKSIMYAAPKTEIKELGTVRLLLAEKYGKEFAMQAMDNADGKVNHKVVRKLS
VEPPRLELVQGYLEEISKAYGVDWPKRSVKSTPPPPDLLDDGGDDDDDDDDDNNPSGAQAQKALQEPMAVAAATR
KLSSRGDEEQELGRATPPKGLGGPASPLTVTPPRMTTDNVHPRVTLGSMELKPNAKTEAAPTPKARGPEGTVPDI
NDLERRFAALKKR*
Coding >Hirsu2|3574
ATGGCTCCGCAGGCGACGCTCGTGACTCGGCTCAAGGTGCAGCTCAAGCTGGCCATCGCCCGGCTGCGGATGGTG
CAGCAGCGCGACGAGCAGCTGGGCAAGACGCACCGGCGGGCCATGGCGCAGCTGCTGGAGGCGGGCAAGGTGGAC
TCGGCGACGATCCGAGTCGAGAACATCATCCGGGCCGACATCACGACCGAGCTGCACGAGATGCTTGAGCTGTAC
TGCGAGCTGCTGCTGGCCCGGGCCGGCCTGCTCGAGGGCGCCGGTTGCGACCCGGGCCTGGAGGAGGCCGTCAAG
AGCATCATGTACGCGGCGCCCAAGACGGAGATCAAGGAGCTCGGCACCGTGCGCCTGCTGCTGGCCGAGAAGTAC
GGCAAAGAGTTCGCCATGCAGGCCATGGACAACGCCGACGGCAAGGTCAACCACAAGGTCGTACGCAAGCTGAGC
GTCGAGCCGCCCCGCCTTGAGCTGGTCCAGGGCTACCTGGAGGAAATCTCCAAGGCCTACGGCGTCGACTGGCCG
AAGCGAAGCGTTAAGTCGACCCCGCCGCCGCCCGACCTCCTGGACGACGGCGGCGATGACGACGACGACGACGAC
GACGACAACAATCCGTCGGGTGCCCAGGCCCAGAAGGCGCTGCAGGAGCCCATGGCCGTCGCCGCCGCGACGAGA
AAGCTGTCGTCCCGAGGCGACGAGGAGCAGGAGCTGGGCCGCGCCACGCCGCCCAAGGGGCTCGGCGGCCCGGCC
AGCCCGCTGACGGTGACGCCGCCGCGGATGACGACGGACAACGTCCACCCGCGCGTCACCCTCGGTTCCATGGAG
CTCAAGCCGAACGCGAAGACGGAGGCGGCGCCGACGCCCAAGGCGAGAGGGCCGGAAGGCACGGTGCCGGACATC
AACGACCTGGAGCGGCGCTTTGCCGCCCTCAAAAAACGGTGA
Transcript >Hirsu2|3574
ATGGCTCCGCAGGCGACGCTCGTGACTCGGCTCAAGGTGCAGCTCAAGCTGGCCATCGCCCGGCTGCGGATGGTG
CAGCAGCGCGACGAGCAGCTGGGCAAGACGCACCGGCGGGCCATGGCGCAGCTGCTGGAGGCGGGCAAGGTGGAC
TCGGCGACGATCCGAGTCGAGAACATCATCCGGGCCGACATCACGACCGAGCTGCACGAGATGCTTGAGCTGTAC
TGCGAGCTGCTGCTGGCCCGGGCCGGCCTGCTCGAGGGCGCCGGTTGCGACCCGGGCCTGGAGGAGGCCGTCAAG
AGCATCATGTACGCGGCGCCCAAGACGGAGATCAAGGAGCTCGGCACCGTGCGCCTGCTGCTGGCCGAGAAGTAC
GGCAAAGAGTTCGCCATGCAGGCCATGGACAACGCCGACGGCAAGGTCAACCACAAGGTCGTACGCAAGCTGAGC
GTCGAGCCGCCCCGCCTTGAGCTGGTCCAGGGCTACCTGGAGGAAATCTCCAAGGCCTACGGCGTCGACTGGCCG
AAGCGAAGCGTTAAGTCGACCCCGCCGCCGCCCGACCTCCTGGACGACGGCGGCGATGACGACGACGACGACGAC
GACGACAACAATCCGTCGGGTGCCCAGGCCCAGAAGGCGCTGCAGGAGCCCATGGCCGTCGCCGCCGCGACGAGA
AAGCTGTCGTCCCGAGGCGACGAGGAGCAGGAGCTGGGCCGCGCCACGCCGCCCAAGGGGCTCGGCGGCCCGGCC
AGCCCGCTGACGGTGACGCCGCCGCGGATGACGACGGACAACGTCCACCCGCGCGTCACCCTCGGTTCCATGGAG
CTCAAGCCGAACGCGAAGACGGAGGCGGCGCCGACGCCCAAGGCGAGAGGGCCGGAAGGCACGGTGCCGGACATC
AACGACCTGGAGCGGCGCTTTGCCGCCCTCAAAAAACGGTGA
Gene >Hirsu2|3574
ATGGCTCCGCAGGCGACGCTCGTGGTATGCCGCCCCTGTCCCTCTTCCTCCGCCTCTCCCTCCGGGCCGACGGTG
ACGCGACAGCGGCTGACACAAGGGCGCGCGCCGGCGGGCAGACTCGGCTCAAGGTGCAGCTCAAGCTGGCCATCG
CCCGGCTGCGGATGGTGCAGCAGCGCGACGAGCAGCTGGGCAAGACGCACCGGCGGGCCATGGCGCAGCTGCTGG
AGGCGGGCAAGGTGGACTCGGCGACGATCCGAGTCGAGAACATCATCCGGGCCGACATCACGACCGAGCTGCACG
AGATGCTTGAGCTGTACTGCGAGCTGCTGCTGGCCCGGGCCGGCCTGCTCGAGGGCGCCGGTTGCGACCCGGGCC
TGGAGGAGGCCGTCAAGAGCATCATGTACGCGGCGCCCAAGACGGAGATCAAGGAGCTCGGCACCGTGCGCCTGC
TGCTGGCCGAGAAGTACGGCAAAGAGTTCGCCATGCAGGCCATGGACAACGCCGACGGCAAGGTCAACCACAAGG
TCGTACGCAAGCTGAGCGTCGAGCCGCCCCGCCTTGAGCTGGTCCAGGGCTACCTGGAGGAAATCTCCAAGGCCT
ACGGCGTCGACTGGCCGAAGCGAAGCGTTAAGTCGACCCCGCCGCCGCCCGACCTCCTGGACGACGGCGGCGATG
ACGACGACGACGACGACGACGACAACAATCCGTCGGGTGCCCAGGCCCAGAAGGCGCTGCAGGAGCCCATGGCCG
TCGCCGCCGCGACGAGAAAGCTGTCGTCCCGAGGCGACGAGGAGCAGGAGCTGGGCCGCGCCACGCCGCCCAAGG
GGCTCGGCGGCCCGGCCAGCCCGCTGACGGTGACGCCGCCGCGGATGACGACGGACAACGTCCACCCGCGCGTCA
CCCTCGGTTCCATGGAGCTCAAGCCGAACGCGAAGACGGAGGCGGCGCCGACGCCCAAGGCGAGAGGGCCGGAAG
GCACGGTGCCGGACATCAACGACCTGGAGCGGCGCTTTGCCGCCCTCAAAAAACGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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