© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3571 |
| Gene name | |
| Location | Contig_1947:1376..3670 |
| Strand | - |
| Gene length (bp) | 2294 |
| Transcript length (bp) | 1896 |
| Coding sequence length (bp) | 1896 |
| Protein length (aa) | 632 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08427 | ARMH3_C | Armadillo-like helical domain-containing protein 3, C-terminal | 1.3E-89 | 406 | 623 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O42972|YGZ2_SCHPO | UPF0588 membrane protein C20F10.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC20F10.02c PE=3 SV=1 | 16 | 616 | 8.0E-54 |
| sp|Q6DCT2|CJ076_XENLA | UPF0668 protein C10orf76 homolog OS=Xenopus laevis PE=2 SV=2 | 15 | 623 | 2.0E-46 |
| sp|Q6PD19|CJ076_MOUSE | UPF0668 protein C10orf76 homolog OS=Mus musculus PE=1 SV=2 | 1 | 623 | 1.0E-43 |
| sp|Q6PGW3|CJ076_DANRE | UPF0668 protein C10orf76 homolog OS=Danio rerio GN=zgc:63733 PE=2 SV=2 | 15 | 623 | 2.0E-43 |
| sp|Q5T2E6|CJ076_HUMAN | UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1 | 15 | 623 | 2.0E-43 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.4892 | 0.5288 | 0.2166 | 0.075 | 0.0177 | 0.0032 | 0.3111 | 0.2223 | 0.3912 | 0.0059 |
| Orthofinder run ID | 4 |
| Orthogroup | 2474 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3571 MEASPLTRQPPPEVLTPKIVELYSLLFKDDEDGDKSDGFWKEFFLLRPERPTLRSMLKEMPAAHVLLIESRTRDL FSRAIDTVKTGQGLAPLHALDTLTIFLSCVLSKKYPHPSSDIMNVLAGLDHIDIVFADFVSTLEGIIRNGTDLNR RHKALEVLLAVTAGAYQTTLLTYLVQRDLFPSVMKFMQESESAGQVLGPFTLLGLLANYNKFEFQNPYQLRLTDF VNESAIRKIVQCVGYTCQALRSDYIDVQEDLPEGWTFSSTLAMIGLGAIVPGPKPEKKPVYDAQTAKNMFSNLPG ENAAILLAAYDFCHANKLFCLTLVTLAGDEGKERAMGSYLGLTSYLLQHAYLSQRATNYAHLNLMVFRLLIEDST ICKSICGDESKGTVRLCRQRQPFLPLVKGDRVIAAYLLDAMIDGINHNLRRRLDVSLYTLCVGIMLRIISYLSRS RTRLSYHWSELFRSLLSLIRFLATYTSDLKELAHIDTLLDHVVNLLALSLSAGEAFLPTPAAYDDLFYKVVESGE VLAKFKDNYKLQNRKSNSINTLISVSTHYEQMLTAGGGSSTKKLSNLTTHQVTEVIKQGYETLDIQAKEGLDTWD RFREADERTLLKKMARTSVGDVRAMIERQIQ* |
| Coding | >Hirsu2|3571 ATGGAGGCGTCACCTCTCACGCGCCAGCCTCCGCCCGAGGTTCTGACCCCCAAGATCGTCGAGCTCTATTCCTTG CTCTTTAAGGATGACGAAGATGGAGATAAATCCGATGGCTTCTGGAAGGAGTTCTTTCTCCTGCGTCCAGAACGG CCCACGCTGCGGAGCATGTTGAAAGAGATGCCCGCCGCCCATGTTCTCCTGATCGAGAGCCGTACCAGGGATCTC TTCAGCAGGGCCATCGACACGGTCAAGACGGGCCAGGGCCTCGCGCCCCTACATGCTCTGGACACCTTGACCATC TTTCTTTCCTGCGTGCTGTCCAAGAAATATCCGCACCCCAGCTCCGATATCATGAATGTGCTGGCCGGGCTCGAC CACATCGACATCGTCTTCGCCGACTTTGTGAGCACGCTGGAGGGCATCATACGGAATGGGACAGACCTGAATCGA CGGCACAAGGCTCTGGAAGTGCTTCTGGCCGTGACCGCGGGCGCATATCAGACTACCCTTCTCACATATCTGGTC CAGAGAGATCTTTTCCCCTCGGTGATGAAGTTCATGCAAGAATCGGAATCAGCGGGCCAGGTGCTGGGTCCATTC ACGCTGCTCGGGCTGCTGGCGAACTATAACAAGTTCGAGTTCCAGAACCCGTATCAGCTTCGTTTGACCGATTTC GTCAACGAATCCGCCATTCGAAAGATCGTCCAGTGCGTTGGGTACACTTGCCAGGCCTTGCGATCCGACTACATC GATGTCCAGGAGGACCTACCGGAAGGCTGGACGTTCAGCAGTACCCTCGCCATGATCGGGCTCGGGGCTATAGTG CCGGGGCCCAAGCCCGAGAAGAAGCCAGTGTACGATGCGCAGACGGCGAAGAACATGTTCTCGAATCTACCAGGG GAGAACGCGGCCATTCTACTGGCAGCCTACGATTTCTGTCACGCTAACAAGCTCTTTTGCCTTACTCTGGTGACG CTCGCGGGAGATGAGGGTAAGGAGCGCGCCATGGGAAGCTACCTGGGGCTGACCTCGTACTTGCTGCAACACGCC TATCTATCACAACGGGCAACCAACTACGCGCATCTCAATCTCATGGTCTTTCGGCTTCTGATTGAGGACTCGACC ATCTGCAAGAGCATATGCGGCGACGAATCAAAAGGTACGGTGCGCCTTTGTCGCCAAAGACAGCCCTTCCTGCCG CTCGTCAAGGGCGACCGGGTGATTGCGGCATACCTTCTCGACGCCATGATCGACGGCATCAACCACAACTTGCGG CGGCGGCTGGATGTCAGCCTCTACACACTCTGTGTCGGGATCATGCTGCGCATCATCTCGTATCTGTCTCGCTCA CGAACCCGTCTCAGCTACCACTGGTCCGAGTTGTTTCGGTCATTGCTATCCCTGATTCGATTCCTGGCGACGTAC ACGTCGGACTTGAAGGAACTCGCCCACATCGACACGCTACTCGACCATGTGGTTAACCTCCTCGCACTATCGCTG TCCGCAGGCGAGGCCTTCCTGCCGACGCCGGCCGCGTATGACGATCTGTTCTACAAGGTGGTCGAGTCTGGCGAG GTGCTTGCCAAGTTCAAGGACAACTACAAGCTCCAGAACCGCAAGAGCAACTCGATCAACACGCTGATCAGCGTC AGCACGCACTACGAACAGATGCTCACGGCAGGCGGCGGCTCGTCGACGAAGAAGCTCAGCAATCTGACCACTCAC CAAGTGACCGAGGTCATCAAACAGGGATACGAGACCTTGGACATCCAGGCGAAAGAGGGTCTGGACACCTGGGAT CGATTCCGGGAGGCAGACGAGAGGACGCTACTGAAGAAGATGGCAAGGACGTCTGTCGGAGATGTACGAGCTATG ATAGAGCGACAAATCCAATGA |
| Transcript | >Hirsu2|3571 ATGGAGGCGTCACCTCTCACGCGCCAGCCTCCGCCCGAGGTTCTGACCCCCAAGATCGTCGAGCTCTATTCCTTG CTCTTTAAGGATGACGAAGATGGAGATAAATCCGATGGCTTCTGGAAGGAGTTCTTTCTCCTGCGTCCAGAACGG CCCACGCTGCGGAGCATGTTGAAAGAGATGCCCGCCGCCCATGTTCTCCTGATCGAGAGCCGTACCAGGGATCTC TTCAGCAGGGCCATCGACACGGTCAAGACGGGCCAGGGCCTCGCGCCCCTACATGCTCTGGACACCTTGACCATC TTTCTTTCCTGCGTGCTGTCCAAGAAATATCCGCACCCCAGCTCCGATATCATGAATGTGCTGGCCGGGCTCGAC CACATCGACATCGTCTTCGCCGACTTTGTGAGCACGCTGGAGGGCATCATACGGAATGGGACAGACCTGAATCGA CGGCACAAGGCTCTGGAAGTGCTTCTGGCCGTGACCGCGGGCGCATATCAGACTACCCTTCTCACATATCTGGTC CAGAGAGATCTTTTCCCCTCGGTGATGAAGTTCATGCAAGAATCGGAATCAGCGGGCCAGGTGCTGGGTCCATTC ACGCTGCTCGGGCTGCTGGCGAACTATAACAAGTTCGAGTTCCAGAACCCGTATCAGCTTCGTTTGACCGATTTC GTCAACGAATCCGCCATTCGAAAGATCGTCCAGTGCGTTGGGTACACTTGCCAGGCCTTGCGATCCGACTACATC GATGTCCAGGAGGACCTACCGGAAGGCTGGACGTTCAGCAGTACCCTCGCCATGATCGGGCTCGGGGCTATAGTG CCGGGGCCCAAGCCCGAGAAGAAGCCAGTGTACGATGCGCAGACGGCGAAGAACATGTTCTCGAATCTACCAGGG GAGAACGCGGCCATTCTACTGGCAGCCTACGATTTCTGTCACGCTAACAAGCTCTTTTGCCTTACTCTGGTGACG CTCGCGGGAGATGAGGGTAAGGAGCGCGCCATGGGAAGCTACCTGGGGCTGACCTCGTACTTGCTGCAACACGCC TATCTATCACAACGGGCAACCAACTACGCGCATCTCAATCTCATGGTCTTTCGGCTTCTGATTGAGGACTCGACC ATCTGCAAGAGCATATGCGGCGACGAATCAAAAGGTACGGTGCGCCTTTGTCGCCAAAGACAGCCCTTCCTGCCG CTCGTCAAGGGCGACCGGGTGATTGCGGCATACCTTCTCGACGCCATGATCGACGGCATCAACCACAACTTGCGG CGGCGGCTGGATGTCAGCCTCTACACACTCTGTGTCGGGATCATGCTGCGCATCATCTCGTATCTGTCTCGCTCA CGAACCCGTCTCAGCTACCACTGGTCCGAGTTGTTTCGGTCATTGCTATCCCTGATTCGATTCCTGGCGACGTAC ACGTCGGACTTGAAGGAACTCGCCCACATCGACACGCTACTCGACCATGTGGTTAACCTCCTCGCACTATCGCTG TCCGCAGGCGAGGCCTTCCTGCCGACGCCGGCCGCGTATGACGATCTGTTCTACAAGGTGGTCGAGTCTGGCGAG GTGCTTGCCAAGTTCAAGGACAACTACAAGCTCCAGAACCGCAAGAGCAACTCGATCAACACGCTGATCAGCGTC AGCACGCACTACGAACAGATGCTCACGGCAGGCGGCGGCTCGTCGACGAAGAAGCTCAGCAATCTGACCACTCAC CAAGTGACCGAGGTCATCAAACAGGGATACGAGACCTTGGACATCCAGGCGAAAGAGGGTCTGGACACCTGGGAT CGATTCCGGGAGGCAGACGAGAGGACGCTACTGAAGAAGATGGCAAGGACGTCTGTCGGAGATGTACGAGCTATG ATAGAGCGACAAATCCAATGA |
| Gene | >Hirsu2|3571 ATGGAGGCGTCACCTCTCACGCGCCAGCCTCCGCCCGAGGTTCTGACCCCCAAGATCGTCGAGCTCTATTCCTTG CTCTTTAAGGTTGGCCTCCCTTCCCATACTCCCCTACCTGCCCAGGGAATACTGGAGACCTAACGGCTTTGTACG CCCAATCAAAAAGGTCCAGCCTCTCCAGTGCCGCAGTGGGAAGCGCCTCGGTTGACGTCGAGAAAACAGGATGAC GAAGATGGAGATAAATCCGATGGCTTCTGGAAGGAGTTCTTTCTCCTGCGTCCAGAACGGCCCACGCTGCGGAGC ATGTTGAAAGAGATGCCCGCCGCCCATGTTCTCCTGATCGAGAGCCGTACCAGGGATCTCTTCAGCAGGGCCATC GACACGGTCAAGACGGGCCAGGGCCTCGCGCCCCTACATGCTCTGGACGTAGGTCTCGAGGCTGCCAATCAGGGG CGCGGACTGCACGGCTGACCACCACGCCTTCCAGACCTTGACCATCTTTCTTTCCTGCGTGCTGTCCAAGAAATA TCCGCACCCCAGCTCCGATATCATGAATGTGCTGGCCGGGCTCGACCACATCGACATCGTCTTCGCCGACTTTGT GAGCACGCTGGAGGGCATCATACGGAATGGGACAGACCGTGAGCAGCATCTCCAAGTCTGGTGATACAACTCGCG TTCCTTGCTCATGGCTCGCACAGTGAATCGACGGCACAAGGCTCTGGAAGTGCTTCTGGCCGTGACCGCGGGCGC ATATCAGACTACCCTTCTCACATATCTGGTCCAGAGAGATCTTTTCCCCTCGGTGATGAAGGTATGCGAGCCCAG TCCGCGCCGTCGCCGTTGCCCTCCTTTCCCTTCCTTACCACCCCTTTCGCTCACAATGTTCACTCAGTTCATGCA AGAATCGGAATCAGCGGGCCAGGTGCTGGGTCCATTCACGCTGCTCGGGCTGCTGGCGAACTATAACAAGTTCGA GTTCCAGAACCCGTATCAGCTTCGTTTGACCGATTTCGTCAACGAATCCGCCATTCGAAAGATCGTCCAGTGCGT TGGGTACACTTGCCAGGCCTTGCGATCCGACTACATCGATGTCCAGGAGGACCTACCGGAAGGCTGGACGTTCAG CAGTACCCTCGCCATGATCGGGCTCGGGGCTATAGTGCCGGGGCCCAAGCCCGAGAAGAAGCCAGTGTACGATGC GCAGACGGCGAAGAACATGTTCTCGAATCTGTGAGTCTGTACCTACCCTGGAACCCTCGGGAGATGAGGCCCTCG CCACTGACAGGAGCAGACCAGGGGAGAACGCGGCCATTCTACTGGCAGCCTACGATTTCTGTCACGCTAACAAGC TCTTTTGCCTTACTCTGGTGACGCTCGCGGGAGATGAGGGTAAGGAGCGCGCCATGGGAAGCTACCTGGGGCTGA CCTCGTACTTGCTGCAACACGCCTATCTATCACAACGGGCAACCAACTACGCGCATCTCAATCTCATGGTCTTTC GGCTTCTGATTGAGGACTCGACCATCTGCAAGAGCATATGCGGCGACGAATCAAAAGGTACGGTGCGCCTTTGTC GCCAAAGACAGCCCTTCCTGCCGCTCGTCAAGGGCGACCGGGTGATTGCGGCATACCTTCTCGACGCCATGATCG ACGGCATCAACCACAACTTGCGGCGGCGGCTGGATGTCAGCCTCTACACACTCTGTGTCGGGATCATGCTGCGCA TCATCTCGTATCTGTCTCGCTCACGAACCCGTCTCAGCTACCACTGGTCCGAGTTGTTTCGGTCATTGCTATCCC TGATTCGATTCCTGGCGACGTACACGTCGGACTTGAAGGAACTCGCCCACATCGACACGCTACTCGACCATGTGG TTAACCTCCTCGCACTATCGCTGTCCGCAGGCGAGGCCTTCCTGCCGACGCCGGCCGCGTATGACGATCTGTTCT ACAAGGTGGTCGAGTCTGGCGAGGTGCTTGCCAAGTTCAAGGACAACTACAAGCTCCAGAACCGCAAGAGCAACT CGATCAACACGCTGATCAGCGTCAGCACGCACTACGAACAGATGCTCACGGCAGGCGGCGGCTCGTCGACGAAGA AGCTCAGCAATCTGACCACTCACCAAGTGACCGAGGTCATCAAACAGGGATACGAGACCTTGGACATCCAGGCGA AAGAGGGTCTGGACACCTGGGATCGATTCCGGGAGGCAGACGAGAGGACGCTACTGAAGAAGATGGCAAGGACGT CTGTCGGAGATGTACGAGCTATGATAGAGCGACAAATCCAATGA |