Protein ID | Hirsu2|3569 |
Gene name | |
Location | Contig_1945:641..1932 |
Strand | + |
Gene length (bp) | 1291 |
Transcript length (bp) | 1185 |
Coding sequence length (bp) | 1185 |
Protein length (aa) | 395 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal | 0.4832 | 0.6504 | 0.4384 | 0.2171 | 0.1033 | 0.0367 | 0.1402 | 0.0931 | 0.1082 | 0.0195 |
Orthofinder run ID | 4 |
Orthogroup | 117 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3569 MRVARRSIADEKTLEHFMHISIEDPVRAIVEHFRQVDEICDAFDIGNGIVFENHPHAVSDVAEEVVARQSVSTPP QTPDHRRRLHQLRPDQICIYRSGDDPSSEKRTMIYVSEYKAPHKLTAPHLRAGLRPMDIYKEVVNRKTIPPSSDP DGLFQYHAERLTASALTQTYHYMIEGGLEYGLLTTGEATIFLKVDWAEPETLFYHLAEPGPEVLAHPEHLQSSSA VGQYLAFSLVALGKPGERVEHGQDERDRAAENLNRWAEEFETTLQSIPERDRLAWDSASSWAPTTYDDFDRPDLG LRIRLAPMSGEGDVDEAMQKQTRLVEVNESWHADHARRLKRKQNGPTAAKHASLDWFAEARSILIVQTRSVMLEE LKEALARNIRSTTLHGCNF* |
Coding | >Hirsu2|3569 ATGAGAGTGGCGCGGCGATCGATAGCAGATGAGAAGACACTGGAACACTTCATGCATATTAGTATCGAAGATCCT GTCAGAGCCATAGTGGAGCATTTCAGGCAGGTTGACGAGATATGCGACGCATTCGATATAGGGAACGGAATCGTC TTCGAGAACCACCCGCACGCCGTCAGCGACGTCGCCGAGGAAGTAGTCGCCCGGCAGAGCGTGTCGACACCGCCG CAGACACCGGATCACCGACGACGTCTTCATCAGCTGCGGCCCGACCAAATCTGCATCTATCGATCAGGCGATGAC CCATCTTCGGAGAAGCGGACCATGATCTACGTATCCGAGTATAAGGCGCCCCATAAGCTCACAGCTCCGCACCTC CGTGCCGGACTACGGCCGATGGACATCTACAAGGAAGTCGTCAATCGGAAGACAATCCCGCCATCCAGCGACCCA GACGGCCTTTTCCAATATCACGCCGAGAGATTAACGGCGTCTGCGCTCACACAGACGTATCATTATATGATCGAG GGCGGTCTCGAGTACGGGCTACTAACGACTGGCGAGGCGACCATCTTTCTCAAGGTAGACTGGGCAGAGCCTGAG ACTTTATTCTATCACTTGGCAGAGCCCGGGCCCGAGGTGTTGGCTCATCCAGAGCATCTGCAGTCAAGCTCCGCG GTGGGGCAGTATCTCGCCTTCAGCCTGGTGGCTCTAGGAAAGCCGGGCGAACGCGTGGAGCACGGGCAGGATGAG CGTGATCGGGCGGCGGAAAATCTCAACAGGTGGGCGGAGGAGTTCGAAACGACGCTACAATCGATCCCCGAGCGC GATAGATTGGCGTGGGACAGCGCGTCCAGCTGGGCACCTACGACATACGACGACTTTGACCGTCCGGACCTCGGC CTCCGGATACGCCTAGCCCCGATGAGCGGCGAAGGGGACGTGGACGAGGCAATGCAGAAGCAGACGCGCCTCGTA GAAGTCAACGAATCCTGGCACGCCGACCACGCGAGGAGGCTAAAGAGGAAGCAGAACGGCCCTACTGCAGCCAAG CATGCCTCCTTGGACTGGTTCGCGGAGGCACGCTCGATCCTCATTGTCCAAACACGAAGTGTCATGTTGGAGGAG CTCAAGGAGGCACTCGCGCGCAACATCCGATCAACCACTCTACATGGCTGCAACTTCTGA |
Transcript | >Hirsu2|3569 ATGAGAGTGGCGCGGCGATCGATAGCAGATGAGAAGACACTGGAACACTTCATGCATATTAGTATCGAAGATCCT GTCAGAGCCATAGTGGAGCATTTCAGGCAGGTTGACGAGATATGCGACGCATTCGATATAGGGAACGGAATCGTC TTCGAGAACCACCCGCACGCCGTCAGCGACGTCGCCGAGGAAGTAGTCGCCCGGCAGAGCGTGTCGACACCGCCG CAGACACCGGATCACCGACGACGTCTTCATCAGCTGCGGCCCGACCAAATCTGCATCTATCGATCAGGCGATGAC CCATCTTCGGAGAAGCGGACCATGATCTACGTATCCGAGTATAAGGCGCCCCATAAGCTCACAGCTCCGCACCTC CGTGCCGGACTACGGCCGATGGACATCTACAAGGAAGTCGTCAATCGGAAGACAATCCCGCCATCCAGCGACCCA GACGGCCTTTTCCAATATCACGCCGAGAGATTAACGGCGTCTGCGCTCACACAGACGTATCATTATATGATCGAG GGCGGTCTCGAGTACGGGCTACTAACGACTGGCGAGGCGACCATCTTTCTCAAGGTAGACTGGGCAGAGCCTGAG ACTTTATTCTATCACTTGGCAGAGCCCGGGCCCGAGGTGTTGGCTCATCCAGAGCATCTGCAGTCAAGCTCCGCG GTGGGGCAGTATCTCGCCTTCAGCCTGGTGGCTCTAGGAAAGCCGGGCGAACGCGTGGAGCACGGGCAGGATGAG CGTGATCGGGCGGCGGAAAATCTCAACAGGTGGGCGGAGGAGTTCGAAACGACGCTACAATCGATCCCCGAGCGC GATAGATTGGCGTGGGACAGCGCGTCCAGCTGGGCACCTACGACATACGACGACTTTGACCGTCCGGACCTCGGC CTCCGGATACGCCTAGCCCCGATGAGCGGCGAAGGGGACGTGGACGAGGCAATGCAGAAGCAGACGCGCCTCGTA GAAGTCAACGAATCCTGGCACGCCGACCACGCGAGGAGGCTAAAGAGGAAGCAGAACGGCCCTACTGCAGCCAAG CATGCCTCCTTGGACTGGTTCGCGGAGGCACGCTCGATCCTCATTGTCCAAACACGAAGTGTCATGTTGGAGGAG CTCAAGGAGGCACTCGCGCGCAACATCCGATCAACCACTCTACATGGCTGCAACTTCTGA |
Gene | >Hirsu2|3569 ATGAGAGTGGCGCGGCGATCGATAGCAGATGAGAAGACACTGGAACACTTCATGCATATTAGTATCGAAGATCCT GTCAGAGCCATAGTGGAGCATTTCAGGCAGGTTGACGAGATATGCGACGCATTCGATATAGGGAACGGAATCGTC TTCGAGAACCACCCGCACGCCGTCAGCGACGTCGCCGAGGAAGTAGTCGCCCGGCAGAGCGTGTCGACACCGCCG CAGACACCGGATCACCGACGACGTCTTCATCAGCTGCGGCCCGACCAAATCTGCATCTATCGATCAGGCGATGAC CCATCTTCGGAGAAGCGGACCATGATCTACGTATCCGAGTATAAGGCGCCCCATAAGCTCACAGCTCCGCACCTC CGTGCCGGACTACGGCCGATGGACATCTACAAGGAAGTCGTCAATCGGAAGACAATCCCGCCATCCAGCGACCCA GACGGCCTTTTCCAATATCACGCCGAGAGATTAACGGCGTCTGCGCTCACACAGACGTATCATTATATGATCGAG GGCGGTCTCGAGTACGGGCTACTAACGACTGGCGAGGCGACCATCTTTCTCAAGGTAGACTGGGCAGAGCCTGAG ACTTTATTCTATCACTTGGCAGAGCCCGGGCCCGAGGTGTTGGCTCATCCAGAGCATCTGCAGTCAAGCTCCGCG GTGGGGCAGTATCTCGCCTTCAGCCTGGTGGCTCTAGGAAAGCCGGGCGAACGCGTGGAGCACGGGCAGGATGAG CGTGATCGGGCGGCGGAAAATCTCAACAGGTGGGCGGAGGAGTTCGAAACGACGCTACAATCGATCCCCGAGCGC GATAGATTGGCGTGGGACAGCGCGTCCAGCTGGGCACCTACGACATACGACGACTTTGACCGGTCGCCCCTTGCG TGTCGGGGGAAGAGACGCCGTCCGAGTATTAGAGGCGGCGAGTGCAACCAGATTGCGACTAAACGAGATCAATCG GAATCGTCGGACGACCAGTCCGGACCTCGGCCTCCGGATACGCCTAGCCCCGATGAGCGGCGAAGGGGACGTGGA CGAGGCAATGCAGAAGCAGACGCGCCTCGTAGAAGTCAACGAATCCTGGCACGCCGACCACGCGAGGAGGCTAAA GAGGAAGCAGAACGGCCCTACTGCAGCCAAGCATGCCTCCTTGGACTGGTTCGCGGAGGCACGCTCGATCCTCAT TGTCCAAACACGAAGTGTCATGTTGGAGGAGCTCAAGGAGGCACTCGCGCGCAACATCCGATCAACCACTCTACA TGGCTGCAACTTCTGA |