Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3556
Gene name
LocationContig_194:4354..4860
Strand+
Gene length (bp)506
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.089 0.0787 0.9325 0.0798 0.085 0.0285 0.0986 0.05 0.0438 0.005

SignalP

SignalP signal predicted Location Score
Yes 1 - 28 0.670422

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5146
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|455
Ophiocordyceps australis map64 (Brazil) OphauB2|264
Ophiocordyceps australis map64 (Brazil) OphauB2|7295
Ophiocordyceps camponoti-rufipedis Ophun1|2525
Ophiocordyceps kimflemingae Ophio5|7787
Ophiocordyceps subramaniannii Hirsu2|3556 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3556
MKISVALLLPLGMVASSMPLWVGKIFRREPALPSTEPTLGEKILAALAPLPGMTAAGTFGGGVLGGAGLAAGPSR
LGVGLGRPGVGLRFPNTNPPGSAPHANGGGGLAGNGLPGGGSIRANIDAGGLGRTIAPGAGLKPRPA*
Coding >Hirsu2|3556
ATGAAGATCTCAGTAGCTCTCCTTCTTCCCCTTGGAATGGTGGCCTCGTCCATGCCACTGTGGGTTGGGAAAATC
TTCCGGCGAGAGCCTGCGCTACCTTCCACTGAGCCGACCTTGGGAGAGAAGATTCTCGCGGCTTTGGCGCCTCTG
CCAGGCATGACTGCGGCGGGCACCTTTGGTGGTGGCGTACTTGGGGGCGCTGGCCTCGCAGCAGGTCCTTCTCGT
CTTGGCGTTGGCCTTGGTCGCCCTGGAGTTGGGCTCAGGTTCCCAAACACGAATCCGCCAGGATCAGCACCGCAT
GCGAATGGTGGGGGAGGACTTGCTGGGAACGGACTTCCGGGAGGGGGCTCGATTCGGGCGAATATAGATGCCGGA
GGCCTAGGACGGACGATTGCCCCAGGTGCAGGCCTCAAACCACGCCCGGCTTAG
Transcript >Hirsu2|3556
ATGAAGATCTCAGTAGCTCTCCTTCTTCCCCTTGGAATGGTGGCCTCGTCCATGCCACTGTGGGTTGGGAAAATC
TTCCGGCGAGAGCCTGCGCTACCTTCCACTGAGCCGACCTTGGGAGAGAAGATTCTCGCGGCTTTGGCGCCTCTG
CCAGGCATGACTGCGGCGGGCACCTTTGGTGGTGGCGTACTTGGGGGCGCTGGCCTCGCAGCAGGTCCTTCTCGT
CTTGGCGTTGGCCTTGGTCGCCCTGGAGTTGGGCTCAGGTTCCCAAACACGAATCCGCCAGGATCAGCACCGCAT
GCGAATGGTGGGGGAGGACTTGCTGGGAACGGACTTCCGGGAGGGGGCTCGATTCGGGCGAATATAGATGCCGGA
GGCCTAGGACGGACGATTGCCCCAGGTGCAGGCCTCAAACCACGCCCGGCTTAG
Gene >Hirsu2|3556
ATGAAGATCTCAGTAGCTCTCCTTCTTCCCCTTGGAATGGTGGCCTCGTCCATGCCACTGTGGGTTGGGAAAATC
TTCCGGCGAGAGCCTGCGCTACCTTCCACTGAGCCGACCTTGGGAGAGAAGATTCTCGCGGCTTTGGCGGTAAGC
AGATACTTGATCATACGAGACACGGCCCTTCTGTAACCTGCCGGCTAATATTTTGAGCGACCGACTTACAGCCTC
TGCCAGGCATGACTGCGGCGGGCACCTTTGGTGGTGGCGTACTTGGGGGCGCTGGCCTCGCAGCAGGTCCTTCTC
GTCTTGGCGTTGGCCTTGGTCGCCCTGGAGTTGGGCTCAGGTTCCCAAACACGAATCCGCCAGGATCAGCACCGC
ATGCGAATGGTGGGGGAGGACTTGCTGGGAACGGACTTCCGGGAGGGGGCTCGATTCGGGCGAATATAGATGCCG
GAGGCCTAGGACGGACGATTGCCCCAGGTGCAGGCCTCAAACCACGCCCGGCTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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